EnhancerDB
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  3. vista27594[chr18:56074480-56074676]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27594[chr18:56074480-56074676]
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Tissue distribution of vista27594
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Transcription factor that possibly regulate vista27594[chr18:56074480-56074676]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56074582 56074866 NR3C1 UCSC Txn Factor no Conserved 108338269
chr18 56074485 56074488 MYB TRANSFAC yes 42714932
chr18 56074485 56074488 MYB TRANSFAC yes 110945330
chr18 56074513 56074531 MAFF JASPAR yes 42714933
chr18 56074513 56074531 MAFF JASPAR yes 110945331
chr18 56074514 56074529 MAFK JASPAR yes 42714934
chr18 56074514 56074529 MAFK JASPAR yes 110945332
chr18 56074585 56074596 NFE2L2 JASPAR yes 42714935
chr18 56074585 56074596 NFE2L2 JASPAR yes 110945333
chr18 56074597 56074612 RFX5 JASPAR yes 42714936
chr18 56074597 56074612 RFX5 JASPAR yes 110945334
chr18 56074600 56074615 JUND JASPAR yes 42714937
chr18 56074600 56074615 JUND JASPAR yes 110945335
chr18 56074602 56074616 ATF7 JASPAR yes 42714938
chr18 56074602 56074616 BATF3 JASPAR yes 42714939
chr18 56074602 56074616 ATF7 JASPAR yes 110945336
chr18 56074602 56074616 BATF3 JASPAR yes 110945337
chr18 56074603 56074615 JDP2 JASPAR yes 42714940
chr18 56074603 56074615 JDP2 JASPAR yes 110945338
chr18 56074603 56074618 JUND JASPAR yes 42714941
chr18 56074603 56074618 JUND JASPAR yes 110945339
chr18 56074604 56074613 JUN TRANSFAC yes 42714942
chr18 56074604 56074613 JUN TRANSFAC yes 110945340
chr18 56074604 56074617 JUN JASPAR yes 42714943
chr18 56074604 56074617 JUN JASPAR yes 110945341
chr18 56074605 56074612 JUN TRANSFAC yes 42714944
chr18 56074605 56074612 JUN TRANSFAC yes 110945342
chr18 56074613 56074627 NR2F1 JASPAR yes 42714945
chr18 56074613 56074627 NR2F1 JASPAR yes 110945343
chr18 56074613 56074628 HNF4G JASPAR yes 42714946
chr18 56074613 56074628 HNF4G JASPAR yes 110945344
chr18 56074635 56074650 MEF2A JASPAR yes 42714947
chr18 56074635 56074650 MEF2A JASPAR yes 110945345
chr18 56074637 56074649 MEF2B JASPAR yes 42714948
chr18 56074637 56074649 MEF2B JASPAR yes 110945346
chr18 56074639 56074647 FOXL1 JASPAR yes 42714949
chr18 56074639 56074647 FOXL1 JASPAR yes 110945347
chr18 56074641 56074649 FOXO3 JASPAR yes 42714950
chr18 56074641 56074649 FOXO3 JASPAR yes 110945348
chr18 56074664 56074678 GATA2 JASPAR yes 42714951
chr18 56074664 56074678 GATA2 JASPAR yes 110945349
chr18 56074668 56074676 GATA5 JASPAR yes 42714952
chr18 56074668 56074676 GATA5 JASPAR yes 110945350
SNP sites on vista27594[chr18:56074480-56074676]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56074499 rs4940685 T C no 5284354
chr18 56074541 rs141365708 C T no 5284355
chr18 56074548 rs149821139 G A no 5284356
chr18 56074644 rs145796443 T A,G
FOXL1 FOXO3 MEF2A MEF2B NR3C1
5284357
Genes possibly regulated by vista27594[chr18:56074480-56074676]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27594[chr18:56074480-56074676]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.05821424682066237 0.941607 0.66199 790
Expression level of miRNAs
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