EnhancerDB
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  3. vista27595[chr18:56081187-56081552]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27595[chr18:56081187-56081552]
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Tissue distribution of vista27595
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Transcription factor that possibly regulate vista27595[chr18:56081187-56081552]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56080936 56081794 NFIC UCSC Txn Factor no Conserved 108338277
chr18 56080957 56081768 EP300 UCSC Txn Factor no Conserved 108338281
chr18 56081005 56081781 MYBL2 UCSC Txn Factor no Conserved 108338282
chr18 56081022 56081643 RXRA UCSC Txn Factor no Conserved 108338284
chr18 56081063 56081641 SP1 UCSC Txn Factor no Conserved 108338287
chr18 56081067 56081554 HNF4G UCSC Txn Factor no Conserved 108338289
chr18 56081067 56081621 FOXA1 UCSC Txn Factor no Conserved 108338291
chr18 56081071 56081607 FOXA2 UCSC Txn Factor no Conserved 108338293
chr18 56081073 56081901 TCF7L2 UCSC Txn Factor no Conserved 108338296
chr18 56081182 56081487 TEAD4 UCSC Txn Factor no Conserved 108338301
chr18 56081339 56081574 CEBPB UCSC Txn Factor no Conserved 108338316
chr18 56081194 56081214 TBX19 JASPAR yes 42714953
chr18 56081207 56081221 GATA2 JASPAR yes 42714954
chr18 56081209 56081215 GATA1 TRANSFAC yes 42714955
chr18 56081227 56081241 TCF7L2 JASPAR yes 42714956
chr18 56081227 56081242 HNF4G JASPAR yes 42714957
chr18 56081228 56081243 HNF4A JASPAR yes 42714958
chr18 56081231 56081237 TCF1 TRANSFAC yes 42714959
chr18 56081231 56081238 TCF4 TRANSFAC yes 42714960
chr18 56081242 56081263 IRF1 JASPAR yes 42714961
chr18 56081244 56081259 PRDM1 JASPAR yes 42714962
chr18 56081254 56081262 GATA3 JASPAR yes 42714963
chr18 56081295 56081316 ZNF263 JASPAR yes 42714964
chr18 56081298 56081304 PEA3 TRANSFAC yes 42714965
chr18 56081300 56081311 NFKB1 JASPAR yes 42714966
chr18 56081318 56081328 SP1 JASPAR yes 42714967
chr18 56081319 56081323 LFA1 TRANSFAC yes 42714968
chr18 56081327 56081332 NFY TRANSFAC yes 42714969
chr18 56081330 56081348 ESR1 JASPAR yes 42714970
chr18 56081333 56081344 NRL JASPAR yes 42714971
chr18 56081334 56081344 USF1 TRANSFAC yes 42714972
chr18 56081349 56081353 ESR1 TRANSFAC yes 42714973
chr18 56081406 56081414 FOXO3 JASPAR yes 42714974
chr18 56081411 56081417 SOX10 JASPAR yes 42714975
chr18 56081412 56081423 FOXA1 JASPAR yes 42714976
chr18 56081412 56081427 FOXA1 JASPAR yes 42714977
chr18 56081413 56081425 FOXC2 JASPAR yes 42714978
chr18 56081440 56081454 FOXF2 JASPAR yes 42714979
chr18 56081443 56081455 FOXI1 JASPAR yes 42714980
chr18 56081468 56081473 TFAP2A TRANSFAC yes 42714981
chr18 56081468 56081474 MZF1 JASPAR yes 42714982
chr18 56081473 56081484 CEBPA JASPAR yes 42714983
chr18 56081474 56081484 CEBPB JASPAR yes 42714984
chr18 56081474 56081484 CEBPE JASPAR yes 42714985
chr18 56081474 56081484 CEBPG JASPAR yes 42714986
chr18 56081474 56081485 CEBPB JASPAR yes 42714987
chr18 56081477 56081481 LFA1 TRANSFAC yes 42714988
chr18 56081491 56081501 SP1 JASPAR yes 42714989
chr18 56081496 56081502 ESR1 TRANSFAC yes 42714990
chr18 56081498 56081502 ESR1 TRANSFAC yes 42714991
chr18 56081500 56081515 NR2C2 JASPAR yes 42714992
chr18 56081508 56081528 PPARG JASPAR yes 42714993
chr18 56081512 56081526 RXRB JASPAR yes 42714994
chr18 56081512 56081526 RXRG JASPAR yes 42714995
SNP sites on vista27595[chr18:56081187-56081552]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56081316 rs117191739 G A
EP300 FOXA1 FOXA2 HNF4G MYBL2 NFIC RXRA SP1 TCF7L2 TEAD4 ZNF263
5284431
chr18 56081428 rs374334654 G A
CEBPB EP300 FOXA1 FOXA2 HNF4G MYBL2 NFIC RXRA SP1 TCF7L2 TEAD4
5284432
Genes possibly regulated by vista27595[chr18:56081187-56081552]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27595[chr18:56081187-56081552]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.06966305150519106 0.941607 0.66199 790
Expression level of miRNAs
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