EnhancerDB
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  3. vista27596[chr18:56096279-56096485]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27596[chr18:56096279-56096485]
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Tissue distribution of vista27596
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Transcription factor that possibly regulate vista27596[chr18:56096279-56096485]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56096288 56096304 POU4F2 JASPAR yes 42714996
chr18 56096288 56096304 POU4F3 JASPAR yes 42714997
chr18 56096288 56096304 POU4F2 JASPAR yes 110946894
chr18 56096288 56096304 POU4F3 JASPAR yes 110946895
chr18 56096293 56096297 YY1 TRANSFAC yes 42714998
chr18 56096293 56096297 YY1 TRANSFAC yes 110946896
chr18 56096294 56096304 HOXA13 JASPAR yes 42714999
chr18 56096294 56096304 HOXD13 JASPAR yes 42715000
chr18 56096294 56096304 HOXA13 JASPAR yes 110946897
chr18 56096294 56096304 HOXD13 JASPAR yes 110946898
chr18 56096294 56096305 HOXA10 JASPAR yes 42715001
chr18 56096294 56096305 HOXA10 JASPAR yes 110946899
chr18 56096295 56096304 CDX1 JASPAR yes 42715002
chr18 56096295 56096304 CDX1 JASPAR yes 110946900
chr18 56096295 56096306 CDX2 JASPAR yes 42715003
chr18 56096295 56096306 CDX2 JASPAR yes 110946901
chr18 56096301 56096305 YY1 TRANSFAC yes 42715004
chr18 56096301 56096305 YY1 TRANSFAC yes 110946902
chr18 56096316 56096320 TEAD2 TRANSFAC yes 42715005
chr18 56096316 56096320 TEAD2 TRANSFAC yes 110946903
chr18 56096338 56096348 MEF2A JASPAR yes 42715006
chr18 56096338 56096348 MEF2A JASPAR yes 110946904
chr18 56096339 56096343 YY1 TRANSFAC yes 42715007
chr18 56096339 56096343 YY1 TRANSFAC yes 110946905
chr18 56096339 56096348 POU5F1B JASPAR yes 42715008
chr18 56096339 56096348 POU5F1B JASPAR yes 110946906
chr18 56096362 56096368 NFIC JASPAR yes 42715009
chr18 56096362 56096368 NFIC JASPAR yes 110946907
chr18 56096370 56096374 YY1 TRANSFAC yes 42715010
chr18 56096370 56096374 YY1 TRANSFAC yes 110946908
chr18 56096370 56096385 STAT1 JASPAR yes 42715011
chr18 56096370 56096385 STAT1 JASPAR yes 110946909
chr18 56096371 56096379 FEV JASPAR yes 42715012
chr18 56096371 56096379 FEV JASPAR yes 110946910
chr18 56096378 56096388 TEAD4 JASPAR yes 42715013
chr18 56096378 56096388 TEAD4 JASPAR yes 110946911
chr18 56096404 56096410 SOX10 JASPAR yes 42715014
chr18 56096404 56096410 SOX10 JASPAR yes 110946912
chr18 56096406 56096426 PPARG JASPAR yes 42715015
chr18 56096406 56096426 PPARG JASPAR yes 110946913
chr18 56096411 56096423 HNF1B JASPAR yes 42715016
chr18 56096411 56096423 HNF1B JASPAR yes 110946914
chr18 56096411 56096426 FOXA1 JASPAR yes 42715017
chr18 56096411 56096426 FOXA1 JASPAR yes 110946915
chr18 56096413 56096427 FOXF2 JASPAR yes 42715018
chr18 56096413 56096427 FOXF2 JASPAR yes 110946916
chr18 56096414 56096425 FOXB1 JASPAR yes 42715019
chr18 56096414 56096425 FOXC1 JASPAR yes 42715020
chr18 56096414 56096425 FOXB1 JASPAR yes 110946917
chr18 56096414 56096425 FOXC1 JASPAR yes 110946918
chr18 56096415 56096419 YY1 TRANSFAC yes 42715021
chr18 56096415 56096419 YY1 TRANSFAC yes 110946919
chr18 56096418 56096428 MZF1 JASPAR yes 42715022
chr18 56096418 56096428 MZF1 JASPAR yes 110946920
chr18 56096445 56096463 SRF JASPAR yes 42715023
chr18 56096445 56096463 SRF JASPAR yes 110946921
chr18 56096462 56096475 ZBTB18 JASPAR yes 42715024
chr18 56096462 56096475 ZBTB18 JASPAR yes 110946922
chr18 56096484 56096496 IRF1 JASPAR yes 42715025
chr18 56096484 56096496 IRF1 JASPAR yes 110946923
SNP sites on vista27596[chr18:56096279-56096485]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56096291 rs147869889 T A
POU4F2 POU4F3
5284530
chr18 56096437 rs141861553 C G,T no 5284531
Genes possibly regulated by vista27596[chr18:56096279-56096485]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27596[chr18:56096279-56096485]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.12324836685026258 0.941607 0.66199 790
Expression level of miRNAs
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