EnhancerDB
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  3. vista27598[chr18:56117134-56117320]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27598[chr18:56117134-56117320]
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Tissue distribution of vista27598
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Transcription factor that possibly regulate vista27598[chr18:56117134-56117320]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56117125 56117137 HNF1B JASPAR yes 42715060
chr18 56117125 56117137 HNF1B JASPAR yes 110949178
chr18 56117134 56117139 ETS2 TRANSFAC yes 42715061
chr18 56117134 56117139 ETS2 TRANSFAC yes 110949179
chr18 56117138 56117146 GATA5 JASPAR yes 42715062
chr18 56117138 56117146 GATA5 JASPAR yes 110949180
chr18 56117141 56117144 MYB TRANSFAC yes 42715063
chr18 56117141 56117144 MYB TRANSFAC yes 110949181
chr18 56117143 56117154 FOXH1 JASPAR yes 42715064
chr18 56117143 56117154 FOXH1 JASPAR yes 110949182
chr18 56117147 56117153 ZNF354C JASPAR yes 42715065
chr18 56117147 56117153 ZNF354C JASPAR yes 110949183
chr18 56117147 56117168 IRF1 JASPAR yes 42715066
chr18 56117147 56117168 IRF1 JASPAR yes 110949184
chr18 56117150 56117164 IRF7 JASPAR yes 42715067
chr18 56117150 56117164 IRF7 JASPAR yes 110949185
chr18 56117151 56117157 SOX10 JASPAR yes 42715068
chr18 56117151 56117157 SOX10 JASPAR yes 110949186
chr18 56117152 56117164 IRF1 JASPAR yes 42715069
chr18 56117152 56117164 IRF1 JASPAR yes 110949187
chr18 56117155 56117176 IRF1 JASPAR yes 42715070
chr18 56117155 56117176 IRF1 JASPAR yes 110949188
chr18 56117158 56117179 ZNF263 JASPAR yes 42715071
chr18 56117158 56117179 ZNF263 JASPAR yes 110949189
chr18 56117159 56117173 SPIC JASPAR yes 42715072
chr18 56117159 56117173 STAT1 JASPAR yes 42715073
chr18 56117159 56117173 SPIC JASPAR yes 110949190
chr18 56117159 56117173 STAT1 JASPAR yes 110949191
chr18 56117159 56117174 PRDM1 JASPAR yes 42715074
chr18 56117159 56117174 STAT2 JASPAR yes 42715075
chr18 56117159 56117174 PRDM1 JASPAR yes 110949192
chr18 56117159 56117174 STAT2 JASPAR yes 110949193
chr18 56117161 56117182 IRF1 JASPAR yes 42715076
chr18 56117161 56117182 IRF1 JASPAR yes 110949194
chr18 56117166 56117181 FOXP1 JASPAR yes 42715077
chr18 56117166 56117181 FOXP1 JASPAR yes 110949195
chr18 56117214 56117229 STAT2 JASPAR yes 42715078
chr18 56117214 56117229 STAT2 JASPAR yes 110949196
chr18 56117235 56117240 GATA2 JASPAR yes 42715079
chr18 56117235 56117240 GATA2 JASPAR yes 110949197
chr18 56117248 56117262 PAX6 JASPAR yes 42715080
chr18 56117248 56117262 PAX6 JASPAR yes 110949198
chr18 56117268 56117273 H4TF1 TRANSFAC yes 42715081
chr18 56117268 56117273 H4TF1 TRANSFAC yes 110949199
chr18 56117287 56117305 E2F3 JASPAR yes 42715082
chr18 56117287 56117305 E2F3 JASPAR yes 110949200
chr18 56117288 56117304 E2F2 JASPAR yes 42715083
chr18 56117288 56117304 E2F2 JASPAR yes 110949201
chr18 56117294 56117315 IRF1 JASPAR yes 42715084
chr18 56117294 56117315 IRF1 JASPAR yes 110949202
chr18 56117295 56117316 IRF1 JASPAR yes 42715085
chr18 56117295 56117316 IRF1 JASPAR yes 110949203
chr18 56117299 56117314 FOXP1 JASPAR yes 42715086
chr18 56117299 56117314 FOXP1 JASPAR yes 110949204
chr18 56117300 56117315 FOXP1 JASPAR yes 42715087
chr18 56117300 56117315 FOXP1 JASPAR yes 110949205
chr18 56117301 56117316 FOXP1 JASPAR yes 42715088
chr18 56117302 56117317 FOXP1 JASPAR yes 42715089
chr18 56117303 56117318 FOXP1 JASPAR yes 42715090
chr18 56117304 56117319 FOXP1 JASPAR yes 42715091
SNP sites on vista27598[chr18:56117134-56117320]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56117134 rs79263202 G A
ETS2 HNF1B
5284726
chr18 56117145 rs1135519 C T
FOXH1 GATA5
5284727
chr18 56117171 rs3834611 G GA
FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2 ZNF263
5284728
chr18 56117300 rs10605417 ATTT A
E2F2 E2F3 FOXP1 IRF1
5284729
chr18 56117300 rs143672020 ATTT A
E2F2 E2F3 FOXP1 IRF1
5284730
chr18 56117300 rs769444504 ATTT A
E2F2 E2F3 FOXP1 IRF1
5284731
Genes possibly regulated by vista27598[chr18:56117134-56117320]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27598[chr18:56117134-56117320]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results