EnhancerDB
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  3. vista27614[chr18:56270693-56270826]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27614[chr18:56270693-56270826]
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Tissue distribution of vista27614
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Transcription factor that possibly regulate vista27614[chr18:56270693-56270826]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56270707 56270713 SOX10 JASPAR yes 42715660
chr18 56270707 56270713 SOX10 JASPAR yes 110964805
chr18 56270710 56270717 E2F1 TRANSFAC yes 42715661
chr18 56270710 56270717 E2F1 TRANSFAC yes 110964806
chr18 56270740 56270746 TCF4 TRANSFAC yes 42715662
chr18 56270740 56270746 TCF4 TRANSFAC yes 110964807
chr18 56270741 56270762 REST JASPAR yes 42715663
chr18 56270741 56270762 REST JASPAR yes 110964808
chr18 56270756 56270777 ZNF263 JASPAR yes 42715664
chr18 56270756 56270777 ZNF263 JASPAR yes 110964809
chr18 56270757 56270778 ZNF263 JASPAR yes 42715665
chr18 56270757 56270778 ZNF263 JASPAR yes 110964810
chr18 56270759 56270780 ZNF263 JASPAR yes 42715666
chr18 56270759 56270780 ZNF263 JASPAR yes 110964811
chr18 56270761 56270771 SP1 JASPAR yes 42715667
chr18 56270761 56270771 SP1 JASPAR yes 110964812
chr18 56270763 56270768 SP1 TRANSFAC yes 42715668
chr18 56270763 56270768 SP1 TRANSFAC yes 110964813
chr18 56270763 56270769 SP1 TRANSFAC yes 42715669
chr18 56270763 56270769 SP1 TRANSFAC yes 110964814
chr18 56270763 56270770 SP1 TRANSFAC yes 42715670
chr18 56270763 56270770 SP1 TRANSFAC yes 110964815
chr18 56270763 56270784 ZNF263 JASPAR yes 42715671
chr18 56270763 56270784 ZNF263 JASPAR yes 110964816
chr18 56270764 56270776 INSM1 JASPAR yes 42715672
chr18 56270764 56270776 INSM1 JASPAR yes 110964817
chr18 56270767 56270777 SP1 JASPAR yes 42715673
chr18 56270767 56270777 SP1 JASPAR yes 110964818
chr18 56270767 56270788 ZNF263 JASPAR yes 42715674
chr18 56270767 56270788 ZNF263 JASPAR yes 110964819
chr18 56270770 56270791 ZNF263 JASPAR yes 42715675
chr18 56270770 56270791 ZNF263 JASPAR yes 110964820
chr18 56270773 56270784 FLI1 JASPAR yes 42715676
chr18 56270773 56270784 FLI1 JASPAR yes 110964821
chr18 56270773 56270794 ZNF263 JASPAR yes 42715677
chr18 56270773 56270794 ZNF263 JASPAR yes 110964822
chr18 56270774 56270795 ZNF263 JASPAR yes 42715678
chr18 56270774 56270795 ZNF263 JASPAR yes 110964823
chr18 56270775 56270783 EHF JASPAR yes 42715679
chr18 56270775 56270783 EHF JASPAR yes 110964824
chr18 56270777 56270782 ETS2 TRANSFAC yes 42715680
chr18 56270777 56270782 ETS2 TRANSFAC yes 110964825
chr18 56270785 56270796 E2F6 JASPAR yes 42715681
chr18 56270785 56270796 E2F6 JASPAR yes 110964826
chr18 56270797 56270810 SMAD2 JASPAR yes 42715682
chr18 56270797 56270810 SMAD2 JASPAR yes 110964827
chr18 56270812 56270822 TFEB JASPAR yes 42715683
chr18 56270812 56270822 TFEC JASPAR yes 42715684
chr18 56270812 56270822 TFEB JASPAR yes 110964828
chr18 56270812 56270822 TFEC JASPAR yes 110964829
chr18 56270812 56270823 USF1 JASPAR yes 42715685
chr18 56270812 56270823 USF2 JASPAR yes 42715686
chr18 56270812 56270823 USF1 JASPAR yes 110964830
chr18 56270812 56270823 USF2 JASPAR yes 110964831
chr18 56270813 56270823 MAX JASPAR yes 42715687
chr18 56270813 56270823 MAX JASPAR yes 110964832
chr18 56270825 56270839 TCF7L2 JASPAR yes 42715688
chr18 56270825 56270839 TCF7L2 JASPAR yes 110964833
chr18 56270825 56270840 LEF1 JASPAR yes 42715689
chr18 56270825 56270840 LEF1 JASPAR yes 110964834
SNP sites on vista27614[chr18:56270693-56270826]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56270729 rs114222375 G A no 5286388
Genes possibly regulated by vista27614[chr18:56270693-56270826]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 74637
chr18 56338618 56417371 + MALT1 ENSG00000172175.8 56338618 0.74 1.0 16613 32208
Expression level of Genes
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miRNAs possibly regulated by vista27614[chr18:56270693-56270826]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results