EnhancerDB
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  3. vista27618[chr18:56293090-56293297]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27618[chr18:56293090-56293297]
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Tissue distribution of vista27618
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Transcription factor that possibly regulate vista27618[chr18:56293090-56293297]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56293114 56293118 YY1 TRANSFAC yes 42715783
chr18 56293114 56293118 YY1 TRANSFAC yes 110967060
chr18 56293118 56293130 HES7 JASPAR yes 42715784
chr18 56293118 56293130 HES7 JASPAR yes 110967061
chr18 56293126 56293136 TCF4 JASPAR yes 42715785
chr18 56293126 56293136 TCF4 JASPAR yes 110967062
chr18 56293128 56293137 ZEB1 JASPAR yes 42715786
chr18 56293128 56293137 ZEB1 JASPAR yes 110967063
chr18 56293130 56293135 SP1 TRANSFAC yes 42715787
chr18 56293130 56293135 SP1 TRANSFAC yes 110967064
chr18 56293143 56293148 SP1 TRANSFAC yes 42715788
chr18 56293143 56293148 SP1 TRANSFAC yes 110967065
chr18 56293146 56293152 ETS1 JASPAR yes 42715789
chr18 56293146 56293152 ETS1 JASPAR yes 110967066
chr18 56293146 56293156 RELA JASPAR yes 42715790
chr18 56293146 56293156 RELA JASPAR yes 110967067
chr18 56293146 56293157 NFKB1 JASPAR yes 42715791
chr18 56293146 56293157 NFKB1 JASPAR yes 110967068
chr18 56293147 56293157 RELA JASPAR yes 42715792
chr18 56293147 56293157 REL JASPAR yes 42715793
chr18 56293147 56293157 RELA JASPAR yes 110967069
chr18 56293147 56293157 REL JASPAR yes 110967070
chr18 56293148 56293166 SRF JASPAR yes 42715794
chr18 56293148 56293166 SRF JASPAR yes 110967071
chr18 56293150 56293166 SRF JASPAR yes 42715795
chr18 56293150 56293166 SRF JASPAR yes 110967072
chr18 56293154 56293158 H1TF2 TRANSFAC yes 42715796
chr18 56293154 56293158 NFE TRANSFAC yes 42715797
chr18 56293154 56293158 SRF TRANSFAC yes 42715798
chr18 56293154 56293158 H1TF2 TRANSFAC yes 110967073
chr18 56293154 56293158 NFE TRANSFAC yes 110967074
chr18 56293154 56293158 SRF TRANSFAC yes 110967075
chr18 56293167 56293179 GRHL1 JASPAR yes 42715799
chr18 56293167 56293179 GRHL1 JASPAR yes 110967076
chr18 56293169 56293185 SOX8 JASPAR yes 42715800
chr18 56293169 56293185 SOX8 JASPAR yes 110967077
chr18 56293175 56293190 HNF1A JASPAR yes 42715801
chr18 56293175 56293190 HNF1A JASPAR yes 110967078
chr18 56293182 56293192 HOXB13 JASPAR yes 42715802
chr18 56293182 56293192 HOXB13 JASPAR yes 110967079
chr18 56293186 56293190 YY1 TRANSFAC yes 42715803
chr18 56293186 56293190 YY1 TRANSFAC yes 110967080
chr18 56293189 56293203 RORA JASPAR yes 42715804
chr18 56293189 56293203 RORA JASPAR yes 110967081
chr18 56293192 56293202 RORA JASPAR yes 42715805
chr18 56293192 56293202 RORA JASPAR yes 110967082
chr18 56293197 56293201 ESR1 TRANSFAC yes 42715806
chr18 56293197 56293201 ESR1 TRANSFAC yes 110967083
chr18 56293198 56293207 SNAI2 JASPAR yes 42715807
chr18 56293198 56293207 SNAI2 JASPAR yes 110967084
chr18 56293198 56293208 SREBF2 JASPAR yes 42715808
chr18 56293198 56293208 SREBF2 JASPAR yes 110967085
chr18 56293201 56293216 FOXP1 JASPAR yes 42715809
chr18 56293201 56293216 FOXP1 JASPAR yes 110967086
chr18 56293202 56293213 FOXP2 JASPAR yes 42715810
chr18 56293202 56293213 FOXP2 JASPAR yes 110967087
chr18 56293203 56293211 FOXG1 JASPAR yes 42715811
chr18 56293203 56293211 FOXG1 JASPAR yes 110967088
chr18 56293204 56293215 FOXA1 JASPAR yes 42715812
chr18 56293204 56293215 FOXH1 JASPAR yes 42715813
chr18 56293204 56293215 FOXA1 JASPAR yes 110967089
chr18 56293204 56293215 FOXH1 JASPAR yes 110967090
chr18 56293206 56293224 IRF2 JASPAR yes 42715814
chr18 56293206 56293224 IRF2 JASPAR yes 110967091
chr18 56293207 56293228 IRF1 JASPAR yes 42715815
chr18 56293207 56293228 IRF1 JASPAR yes 110967092
chr18 56293209 56293224 STAT2 JASPAR yes 42715816
chr18 56293209 56293224 STAT2 JASPAR yes 110967093
chr18 56293210 56293224 STAT1 JASPAR yes 42715817
chr18 56293210 56293224 STAT1 JASPAR yes 110967094
chr18 56293211 56293223 IRF1 JASPAR yes 42715818
chr18 56293211 56293223 IRF1 JASPAR yes 110967095
chr18 56293211 56293225 IRF7 JASPAR yes 42715819
chr18 56293211 56293225 IRF8 JASPAR yes 42715820
chr18 56293211 56293225 IRF7 JASPAR yes 110967096
chr18 56293211 56293225 IRF8 JASPAR yes 110967097
chr18 56293211 56293226 IRF9 JASPAR yes 42715821
chr18 56293211 56293226 IRF9 JASPAR yes 110967098
chr18 56293231 56293246 JUND JASPAR yes 42715822
chr18 56293231 56293246 JUND JASPAR yes 110967099
chr18 56293233 56293247 ATF7 JASPAR yes 42715823
chr18 56293233 56293247 BATF3 JASPAR yes 42715824
chr18 56293233 56293247 ATF7 JASPAR yes 110967100
chr18 56293233 56293247 BATF3 JASPAR yes 110967101
chr18 56293234 56293246 JDP2 JASPAR yes 42715825
chr18 56293234 56293246 JDP2 JASPAR yes 110967102
chr18 56293235 56293245 MLXIPL JASPAR yes 42715826
chr18 56293235 56293245 MLX JASPAR yes 42715827
chr18 56293235 56293245 SREBF1 JASPAR yes 42715828
chr18 56293235 56293245 SREBF2 JASPAR yes 42715829
chr18 56293235 56293245 MLXIPL JASPAR yes 110967103
chr18 56293235 56293245 MLX JASPAR yes 110967104
chr18 56293235 56293245 SREBF1 JASPAR yes 110967105
chr18 56293235 56293245 SREBF2 JASPAR yes 110967106
chr18 56293236 56293241 ATF1 TRANSFAC yes 42715830
chr18 56293236 56293241 ATF1 TRANSFAC yes 110967107
chr18 56293240 56293253 DUXA JASPAR yes 42715831
chr18 56293240 56293253 DUXA JASPAR yes 110967108
chr18 56293241 56293252 DUX4 JASPAR yes 42715832
chr18 56293241 56293252 DUX4 JASPAR yes 110967109
chr18 56293265 56293280 FOXA1 JASPAR yes 42715833
chr18 56293265 56293280 FOXA1 JASPAR yes 110967110
chr18 56293266 56293287 IRF1 JASPAR yes 42715834
chr18 56293266 56293287 IRF1 JASPAR yes 110967111
chr18 56293267 56293279 FOXC2 JASPAR yes 42715835
chr18 56293267 56293279 FOXC2 JASPAR yes 110967112
chr18 56293268 56293279 FOXB1 JASPAR yes 42715836
chr18 56293268 56293279 FOXC1 JASPAR yes 42715837
chr18 56293268 56293279 FOXB1 JASPAR yes 110967113
chr18 56293268 56293279 FOXC1 JASPAR yes 110967114
chr18 56293269 56293280 FOXA1 JASPAR yes 42715838
chr18 56293269 56293280 FOXA1 JASPAR yes 110967115
chr18 56293270 56293284 IRF7 JASPAR yes 42715839
chr18 56293270 56293284 IRF7 JASPAR yes 110967116
chr18 56293272 56293293 IRF1 JASPAR yes 42715840
chr18 56293272 56293293 IRF1 JASPAR yes 110967117
chr18 56293274 56293289 STAT2 JASPAR yes 42715841
chr18 56293274 56293289 STAT2 JASPAR yes 110967118
chr18 56293275 56293279 YY1 TRANSFAC yes 42715842
chr18 56293275 56293279 YY1 TRANSFAC yes 110967119
chr18 56293275 56293289 STAT1 JASPAR yes 42715843
chr18 56293275 56293289 STAT1 JASPAR yes 110967120
chr18 56293276 56293288 IRF1 JASPAR yes 42715844
chr18 56293276 56293288 IRF1 JASPAR yes 110967121
chr18 56293276 56293290 IRF7 JASPAR yes 42715845
chr18 56293276 56293290 IRF8 JASPAR yes 42715846
chr18 56293276 56293290 IRF7 JASPAR yes 110967122
chr18 56293276 56293290 IRF8 JASPAR yes 110967123
chr18 56293276 56293291 IRF9 JASPAR yes 42715847
chr18 56293276 56293291 IRF9 JASPAR yes 110967124
chr18 56293278 56293299 IRF1 JASPAR yes 42715848
chr18 56293278 56293299 IRF1 JASPAR yes 110967125
chr18 56293280 56293295 PRDM1 JASPAR yes 42715849
chr18 56293280 56293295 STAT2 JASPAR yes 42715850
chr18 56293280 56293295 PRDM1 JASPAR yes 110967126
chr18 56293280 56293295 STAT2 JASPAR yes 110967127
chr18 56293293 56293299 NFIC JASPAR yes 42715851
chr18 56293293 56293299 NFIC JASPAR yes 110967128
SNP sites on vista27618[chr18:56293090-56293297]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56293220 rs56287994 T C
IRF1 IRF2 IRF7 IRF8 IRF9 STAT1 STAT2
5286612
Genes possibly regulated by vista27618[chr18:56293090-56293297]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 97108
chr18 56338618 56417371 + MALT1 ENSG00000172175.8 56338618 0.74 1.0 16613 54679
Expression level of Genes
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miRNAs possibly regulated by vista27618[chr18:56293090-56293297]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results