EnhancerDB
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  3. vista27624[chr18:56359373-56359598]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27624[chr18:56359373-56359598]
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Tissue distribution of vista27624
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Transcription factor that possibly regulate vista27624[chr18:56359373-56359598]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56359367 56359382 FOXP1 JASPAR yes 42716069
chr18 56359367 56359382 FOXP1 JASPAR yes 110972169
chr18 56359368 56359381 POU2F2 JASPAR yes 42716070
chr18 56359368 56359381 POU2F2 JASPAR yes 110972170
chr18 56359369 56359380 FOXB1 JASPAR yes 42716071
chr18 56359369 56359380 FOXB1 JASPAR yes 110972171
chr18 56359370 56359374 YY1 TRANSFAC yes 42716072
chr18 56359370 56359374 YY1 TRANSFAC yes 110972172
chr18 56359371 56359380 POU5F1B JASPAR yes 42716073
chr18 56359371 56359380 POU5F1B JASPAR yes 110972173
chr18 56359443 56359457 NR2F1 JASPAR yes 42716074
chr18 56359443 56359457 NR2F1 JASPAR yes 110972174
chr18 56359448 56359461 NFKB1 JASPAR yes 42716075
chr18 56359448 56359461 NFKB1 JASPAR yes 110972175
chr18 56359449 56359460 NFKB1 JASPAR yes 42716076
chr18 56359449 56359460 NFKB1 JASPAR yes 110972176
chr18 56359452 56359456 H4TF2 TRANSFAC yes 42716077
chr18 56359452 56359456 H4TF2 TRANSFAC yes 110972177
chr18 56359455 56359469 PLAG1 JASPAR yes 42716078
chr18 56359455 56359469 PLAG1 JASPAR yes 110972178
chr18 56359456 56359467 EBF1 JASPAR yes 42716079
chr18 56359456 56359467 EBF1 JASPAR yes 110972179
chr18 56359482 56359494 GLI2 JASPAR yes 42716080
chr18 56359482 56359494 GLI2 JASPAR yes 110972180
chr18 56359496 56359507 CDX2 JASPAR yes 42716081
chr18 56359496 56359507 CDX2 JASPAR yes 110972181
chr18 56359498 56359508 HOXA13 JASPAR yes 42716082
chr18 56359498 56359508 HOXA13 JASPAR yes 110972182
chr18 56359518 56359524 TCF4 TRANSFAC yes 42716083
chr18 56359518 56359524 TCF4 TRANSFAC yes 110972183
chr18 56359520 56359535 FOXP1 JASPAR yes 42716084
chr18 56359520 56359535 FOXP1 JASPAR yes 110972184
chr18 56359520 56359541 IRF1 JASPAR yes 42716085
chr18 56359520 56359541 IRF1 JASPAR yes 110972185
chr18 56359522 56359527 ETS2 TRANSFAC yes 42716086
chr18 56359522 56359527 ETS2 TRANSFAC yes 110972186
chr18 56359522 56359537 IRF9 JASPAR yes 42716087
chr18 56359522 56359537 IRF9 JASPAR yes 110972187
chr18 56359524 56359538 STAT1 JASPAR yes 42716088
chr18 56359524 56359538 STAT1 JASPAR yes 110972188
chr18 56359524 56359539 STAT2 JASPAR yes 42716089
chr18 56359524 56359539 STAT2 JASPAR yes 110972189
chr18 56359539 56359543 TEAD2 TRANSFAC yes 42716090
chr18 56359539 56359543 TEAD2 TRANSFAC yes 110972190
chr18 56359543 56359552 SRY JASPAR yes 42716091
chr18 56359543 56359552 SRY JASPAR yes 110972191
chr18 56359558 56359566 HOXA5 JASPAR yes 42716092
chr18 56359558 56359566 HOXA5 JASPAR yes 110972192
chr18 56359573 56359577 TEAD2 TRANSFAC yes 42716093
chr18 56359573 56359577 TEAD2 TRANSFAC yes 110972193
chr18 56359587 56359597 HESX1 JASPAR yes 42716094
chr18 56359587 56359597 LBX2 JASPAR yes 42716095
chr18 56359587 56359597 MIXL1 JASPAR yes 42716096
chr18 56359587 56359597 RAX JASPAR yes 42716097
chr18 56359587 56359597 HESX1 JASPAR yes 110972194
chr18 56359587 56359597 LBX2 JASPAR yes 110972195
chr18 56359587 56359597 MIXL1 JASPAR yes 110972196
chr18 56359587 56359597 RAX JASPAR yes 110972197
chr18 56359588 56359596 ISX JASPAR yes 42716098
chr18 56359588 56359596 LHX9 JASPAR yes 42716099
chr18 56359588 56359596 LMX1B JASPAR yes 42716100
chr18 56359588 56359596 PRRX1 JASPAR yes 42716101
chr18 56359588 56359596 RAX2 JASPAR yes 42716102
chr18 56359588 56359596 SHOX JASPAR yes 42716103
chr18 56359588 56359596 UNCX JASPAR yes 42716104
chr18 56359588 56359596 ISX JASPAR yes 110972198
chr18 56359588 56359596 LHX9 JASPAR yes 110972199
chr18 56359588 56359596 LMX1B JASPAR yes 110972200
chr18 56359588 56359596 PRRX1 JASPAR yes 110972201
chr18 56359588 56359596 RAX2 JASPAR yes 110972202
chr18 56359588 56359596 SHOX JASPAR yes 110972203
chr18 56359588 56359596 UNCX JASPAR yes 110972204
chr18 56359589 56359599 CUX2 JASPAR yes 42716105
chr18 56359589 56359599 PAX3 JASPAR yes 42716106
chr18 56359589 56359599 PAX7 JASPAR yes 42716107
chr18 56359589 56359599 CUX2 JASPAR yes 110972205
chr18 56359589 56359599 PAX3 JASPAR yes 110972206
chr18 56359589 56359599 PAX7 JASPAR yes 110972207
chr18 56359593 56359605 PKNOX1 JASPAR yes 42716108
chr18 56359593 56359605 PKNOX2 JASPAR yes 42716109
chr18 56359593 56359605 TGIF1 JASPAR yes 42716110
chr18 56359593 56359605 TGIF2 JASPAR yes 42716111
chr18 56359593 56359605 PKNOX1 JASPAR yes 110972208
chr18 56359593 56359605 PKNOX2 JASPAR yes 110972209
chr18 56359593 56359605 TGIF1 JASPAR yes 110972210
chr18 56359593 56359605 TGIF2 JASPAR yes 110972211
SNP sites on vista27624[chr18:56359373-56359598]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56359414 rs192594802 G A no 5287137
chr18 56359453 rs368521726 G T
H4TF2 NFKB1 NR2F1
5287138
chr18 56359498 rs11872894 G A
CDX2 HOXA13
5287139
chr18 56359526 rs200833453 G GA
ETS2 FOXP1 IRF1 IRF9 STAT1 STAT2
5287140
Genes possibly regulated by vista27624[chr18:56359373-56359598]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 36816
chr18 56338618 56417371 + MALT1 ENSG00000172175.8 56338618 0.74 1.0 16613 79245
Expression level of Genes
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miRNAs possibly regulated by vista27624[chr18:56359373-56359598]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results