EnhancerDB
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  3. vista27627[chr18:56497255-56497434]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27627[chr18:56497255-56497434]
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Tissue distribution of vista27627
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Transcription factor that possibly regulate vista27627[chr18:56497255-56497434]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56497268 56497279 NFKB1 JASPAR yes 42716224
chr18 56497268 56497279 NFKB1 JASPAR yes 110982136
chr18 56497293 56497308 ZBTB33 JASPAR yes 42716225
chr18 56497293 56497308 ZBTB33 JASPAR yes 110982137
chr18 56497297 56497308 EBF1 JASPAR yes 42716226
chr18 56497297 56497308 EBF1 JASPAR yes 110982138
chr18 56497302 56497309 JUN TRANSFAC yes 42716227
chr18 56497302 56497309 SP1 TRANSFAC yes 42716228
chr18 56497302 56497309 JUN TRANSFAC yes 110982139
chr18 56497302 56497309 SP1 TRANSFAC yes 110982140
chr18 56497307 56497318 JUNB JASPAR yes 42716229
chr18 56497307 56497318 JUNB JASPAR yes 110982141
chr18 56497307 56497321 JUN JASPAR yes 42716230
chr18 56497307 56497321 JUN JASPAR yes 110982142
chr18 56497315 56497319 NFE TRANSFAC yes 42716231
chr18 56497315 56497319 NFE TRANSFAC yes 110982143
chr18 56497349 56497362 DUXA JASPAR yes 42716232
chr18 56497349 56497362 DUXA JASPAR yes 110982144
chr18 56497350 56497361 DUX4 JASPAR yes 42716233
chr18 56497350 56497361 PHOX2A JASPAR yes 42716234
chr18 56497350 56497361 PROP1 JASPAR yes 42716235
chr18 56497350 56497361 DUX4 JASPAR yes 110982145
chr18 56497350 56497361 PHOX2A JASPAR yes 110982146
chr18 56497350 56497361 PROP1 JASPAR yes 110982147
chr18 56497353 56497363 ALX3 JASPAR yes 42716236
chr18 56497353 56497363 ALX3 JASPAR yes 110982148
chr18 56497359 56497373 GLIS3 JASPAR yes 42716237
chr18 56497359 56497373 GLIS3 JASPAR yes 110982149
chr18 56497371 56497375 H4TF2 TRANSFAC yes 42716238
chr18 56497371 56497375 H4TF2 TRANSFAC yes 110982150
chr18 56497373 56497390 ZNF410 JASPAR yes 42716239
chr18 56497373 56497390 ZNF410 JASPAR yes 110982151
chr18 56497382 56497395 ZBTB18 JASPAR yes 42716240
chr18 56497382 56497395 ZBTB18 JASPAR yes 110982152
chr18 56497399 56497410 DUX4 JASPAR yes 42716241
chr18 56497399 56497410 DUX4 JASPAR yes 110982153
chr18 56497411 56497416 SP1 TRANSFAC yes 42716242
chr18 56497411 56497416 SP1 TRANSFAC yes 110982154
chr18 56497413 56497418 TFAP2A TRANSFAC yes 42716243
chr18 56497413 56497418 TFAP2A TRANSFAC yes 110982155
chr18 56497413 56497419 MZF1 JASPAR yes 42716244
chr18 56497413 56497419 MZF1 JASPAR yes 110982156
SNP sites on vista27627[chr18:56497255-56497434]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56497310 rs138698278 TACTC T
JUN JUNB
5288213
chr18 56497310 rs375351645 TACTC T
JUN JUNB
5288214
chr18 56497356 rs142335814 C T
ALX3 DUX4 DUXA PHOX2A PROP1
5288215
Genes possibly regulated by vista27627[chr18:56497255-56497434]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56529832 56653712 + ZNF532 ENSG00000074657.9 56529832 0.76 0.99 16614 67602
Expression level of Genes
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miRNAs possibly regulated by vista27627[chr18:56497255-56497434]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results