EnhancerDB
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  3. vista27638[chr18:56663357-56663639]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27638[chr18:56663357-56663639]
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Tissue distribution of vista27638
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Transcription factor that possibly regulate vista27638[chr18:56663357-56663639]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56663365 56663372 PEA3 TRANSFAC yes 42716612
chr18 56663365 56663372 PEA3 TRANSFAC yes 110998609
chr18 56663383 56663396 ZBTB18 JASPAR yes 42716613
chr18 56663383 56663396 ZBTB18 JASPAR yes 110998610
chr18 56663386 56663399 ZBTB18 JASPAR yes 42716614
chr18 56663386 56663399 ZBTB18 JASPAR yes 110998611
chr18 56663388 56663398 MAX JASPAR yes 42716615
chr18 56663388 56663398 MAX JASPAR yes 110998612
chr18 56663392 56663398 ZNF354C JASPAR yes 42716616
chr18 56663392 56663398 ZNF354C JASPAR yes 110998613
chr18 56663407 56663411 YY1 TRANSFAC yes 42716617
chr18 56663407 56663411 YY1 TRANSFAC yes 110998614
chr18 56663418 56663431 SCRT2 JASPAR yes 42716618
chr18 56663418 56663431 SCRT2 JASPAR yes 110998615
chr18 56663424 56663435 FLI1 JASPAR yes 42716619
chr18 56663424 56663435 FLI1 JASPAR yes 110998616
chr18 56663426 56663433 SPI1 JASPAR yes 42716620
chr18 56663426 56663433 SPI1 JASPAR yes 110998617
chr18 56663426 56663434 FEV JASPAR yes 42716621
chr18 56663426 56663434 FEV JASPAR yes 110998618
chr18 56663428 56663433 ETS2 TRANSFAC yes 42716622
chr18 56663428 56663433 ETS2 TRANSFAC yes 110998619
chr18 56663431 56663445 EBF1 JASPAR yes 42716623
chr18 56663431 56663445 EBF1 JASPAR yes 110998620
chr18 56663440 56663444 LFA1 TRANSFAC yes 42716624
chr18 56663440 56663444 LFA1 TRANSFAC yes 110998621
chr18 56663492 56663498 NFIC JASPAR yes 42716625
chr18 56663492 56663498 NFIC JASPAR yes 110998622
chr18 56663517 56663521 NFE TRANSFAC yes 42716626
chr18 56663517 56663521 NFE TRANSFAC yes 110998623
chr18 56663533 56663549 POU4F2 JASPAR yes 42716627
chr18 56663533 56663549 POU4F2 JASPAR yes 110998624
chr18 56663538 56663550 PBX1 JASPAR yes 42716628
chr18 56663538 56663550 PBX1 JASPAR yes 110998625
chr18 56663555 56663565 HOXC10 JASPAR yes 42716629
chr18 56663555 56663565 HOXD11 JASPAR yes 42716630
chr18 56663555 56663565 HOXC10 JASPAR yes 110998626
chr18 56663555 56663565 HOXD11 JASPAR yes 110998627
chr18 56663555 56663566 HOXC11 JASPAR yes 42716631
chr18 56663555 56663566 HOXC12 JASPAR yes 42716632
chr18 56663555 56663566 HOXC13 JASPAR yes 42716633
chr18 56663555 56663566 HOXD12 JASPAR yes 42716634
chr18 56663555 56663566 HOXC11 JASPAR yes 110998628
chr18 56663555 56663566 HOXC12 JASPAR yes 110998629
chr18 56663555 56663566 HOXC13 JASPAR yes 110998630
chr18 56663555 56663566 HOXD12 JASPAR yes 110998631
chr18 56663579 56663593 TLX1 JASPAR yes 42716635
chr18 56663579 56663593 TLX1 JASPAR yes 110998632
chr18 56663589 56663601 SRF JASPAR yes 42716636
chr18 56663589 56663601 SRF JASPAR yes 110998633
chr18 56663598 56663607 NKX3-2 JASPAR yes 42716637
chr18 56663598 56663607 NKX3-2 JASPAR yes 110998634
chr18 56663598 56663608 NKX2-3 JASPAR yes 42716638
chr18 56663598 56663608 NKX2-3 JASPAR yes 110998635
chr18 56663599 56663607 ISL2 JASPAR yes 42716639
chr18 56663599 56663607 ISL2 JASPAR yes 110998636
chr18 56663604 56663607 MYB TRANSFAC yes 42716640
chr18 56663604 56663607 MYB TRANSFAC yes 110998637
chr18 56663618 56663622 YY1 TRANSFAC yes 42716641
chr18 56663618 56663622 YY1 TRANSFAC yes 110998638
SNP sites on vista27638[chr18:56663357-56663639]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56663525 rs138090335 G A no 5289640
chr18 56663562 rs11152113 C T
HOXC10 HOXC11 HOXC12 HOXC13 HOXD11 HOXD12
5289641
chr18 56663638 rs141909254 C T no 5289642
Genes possibly regulated by vista27638[chr18:56663357-56663639]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27638[chr18:56663357-56663639]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results