EnhancerDB
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  3. vista27645[chr18:57274287-57274609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27645[chr18:57274287-57274609]
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Tissue distribution of vista27645
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Transcription factor that possibly regulate vista27645[chr18:57274287-57274609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 57274283 57274298 FOXP1 JASPAR yes 42716831
chr18 57274283 57274298 FOXP1 JASPAR yes 111034811
chr18 57274283 57274304 IRF1 JASPAR yes 42716832
chr18 57274283 57274304 IRF1 JASPAR yes 111034812
chr18 57274287 57274302 FOXP1 JASPAR yes 42716833
chr18 57274287 57274302 FOXP1 JASPAR yes 111034813
chr18 57274287 57274308 IRF1 JASPAR yes 42716834
chr18 57274287 57274308 IRF1 JASPAR yes 111034814
chr18 57274288 57274303 FOXP1 JASPAR yes 42716835
chr18 57274288 57274303 FOXP1 JASPAR yes 111034815
chr18 57274288 57274309 IRF1 JASPAR yes 42716836
chr18 57274288 57274309 IRF1 JASPAR yes 111034816
chr18 57274289 57274304 FOXP1 JASPAR yes 42716837
chr18 57274289 57274304 FOXP1 JASPAR yes 111034817
chr18 57274289 57274310 IRF1 JASPAR yes 42716838
chr18 57274289 57274310 IRF1 JASPAR yes 111034818
chr18 57274290 57274305 FOXP1 JASPAR yes 42716839
chr18 57274290 57274305 FOXP1 JASPAR yes 111034819
chr18 57274290 57274311 IRF1 JASPAR yes 42716840
chr18 57274290 57274311 IRF1 JASPAR yes 111034820
chr18 57274291 57274306 FOXP1 JASPAR yes 42716841
chr18 57274291 57274306 FOXP1 JASPAR yes 111034821
chr18 57274291 57274312 IRF1 JASPAR yes 42716842
chr18 57274291 57274312 IRF1 JASPAR yes 111034822
chr18 57274292 57274307 FOXP1 JASPAR yes 42716843
chr18 57274292 57274307 FOXP1 JASPAR yes 111034823
chr18 57274293 57274308 FOXP1 JASPAR yes 42716844
chr18 57274293 57274308 FOXP1 JASPAR yes 111034824
chr18 57274293 57274314 IRF1 JASPAR yes 42716845
chr18 57274293 57274314 IRF1 JASPAR yes 111034825
chr18 57274294 57274309 FOXP1 JASPAR yes 42716846
chr18 57274294 57274309 FOXP1 JASPAR yes 111034826
chr18 57274304 57274319 FOXA1 JASPAR yes 42716847
chr18 57274304 57274319 FOXA1 JASPAR yes 111034827
chr18 57274337 57274341 H1TF2 TRANSFAC yes 42716848
chr18 57274337 57274341 NFE TRANSFAC yes 42716849
chr18 57274337 57274341 SRF TRANSFAC yes 42716850
chr18 57274337 57274341 H1TF2 TRANSFAC yes 111034828
chr18 57274337 57274341 NFE TRANSFAC yes 111034829
chr18 57274337 57274341 SRF TRANSFAC yes 111034830
chr18 57274340 57274348 LEF1 TRANSFAC yes 42716851
chr18 57274340 57274348 LEF1 TRANSFAC yes 111034831
chr18 57274344 57274349 ETS2 TRANSFAC yes 42716852
chr18 57274344 57274349 ETS2 TRANSFAC yes 111034832
chr18 57274356 57274363 NKX3-1 JASPAR yes 42716853
chr18 57274356 57274363 NKX3-1 JASPAR yes 111034833
chr18 57274357 57274371 SPIC JASPAR yes 42716854
chr18 57274357 57274371 SPIC JASPAR yes 111034834
chr18 57274363 57274378 FOXP1 JASPAR yes 42716855
chr18 57274363 57274378 FOXP1 JASPAR yes 111034835
chr18 57274366 57274377 FOXP2 JASPAR yes 42716856
chr18 57274366 57274377 FOXP2 JASPAR yes 111034836
chr18 57274367 57274375 FOXO3 JASPAR yes 42716857
chr18 57274367 57274375 FOXO3 JASPAR yes 111034837
chr18 57274368 57274377 SRY JASPAR yes 42716858
chr18 57274368 57274377 SRY JASPAR yes 111034838
chr18 57274372 57274378 SOX10 JASPAR yes 42716859
chr18 57274372 57274378 SOX10 JASPAR yes 111034839
chr18 57274393 57274397 NFE TRANSFAC yes 42716860
chr18 57274393 57274397 NFE TRANSFAC yes 111034840
chr18 57274407 57274415 FOXO3 JASPAR yes 42716861
chr18 57274407 57274415 FOXO3 JASPAR yes 111034841
chr18 57274415 57274430 MEF2C JASPAR yes 42716862
chr18 57274415 57274430 MEF2C JASPAR yes 111034842
chr18 57274418 57274422 YY1 TRANSFAC yes 42716863
chr18 57274418 57274422 YY1 TRANSFAC yes 111034843
chr18 57274420 57274430 HOXD11 JASPAR yes 42716864
chr18 57274420 57274430 HOXD11 JASPAR yes 111034844
chr18 57274445 57274458 POU2F2 JASPAR yes 42716865
chr18 57274445 57274458 POU2F2 JASPAR yes 111034845
chr18 57274447 57274459 POU2F1 JASPAR yes 42716866
chr18 57274447 57274459 POU2F1 JASPAR yes 111034846
chr18 57274468 57274472 YY1 TRANSFAC yes 42716867
chr18 57274468 57274472 YY1 TRANSFAC yes 111034847
chr18 57274471 57274485 GATA2 JASPAR yes 42716868
chr18 57274471 57274485 GATA2 JASPAR yes 111034848
chr18 57274473 57274481 GATA3 JASPAR yes 42716869
chr18 57274473 57274481 GATA3 JASPAR yes 111034849
chr18 57274482 57274500 NFYA JASPAR yes 42716870
chr18 57274482 57274500 NFYA JASPAR yes 111034850
chr18 57274484 57274502 MAFF JASPAR yes 42716871
chr18 57274484 57274502 MAFF JASPAR yes 111034851
chr18 57274485 57274500 MAFK JASPAR yes 42716872
chr18 57274485 57274500 MAFK JASPAR yes 111034852
chr18 57274489 57274500 NRL JASPAR yes 42716873
chr18 57274489 57274500 NRL JASPAR yes 111034853
chr18 57274529 57274535 TCF4 TRANSFAC yes 42716874
chr18 57274529 57274535 TCF4 TRANSFAC yes 111034854
chr18 57274563 57274577 RORA JASPAR yes 42716875
chr18 57274563 57274577 RORA JASPAR yes 111034855
chr18 57274564 57274576 GRHL1 JASPAR yes 42716876
chr18 57274564 57274576 GRHL1 JASPAR yes 111034856
chr18 57274565 57274575 TFCP2 JASPAR yes 42716877
chr18 57274565 57274575 TFCP2 JASPAR yes 111034857
chr18 57274570 57274580 HOXA13 JASPAR yes 42716878
chr18 57274570 57274580 HOXB13 JASPAR yes 42716879
chr18 57274570 57274580 HOXD13 JASPAR yes 42716880
chr18 57274570 57274580 HOXA13 JASPAR yes 111034858
chr18 57274570 57274580 HOXB13 JASPAR yes 111034859
chr18 57274570 57274580 HOXD13 JASPAR yes 111034860
chr18 57274579 57274585 ZNF354C JASPAR yes 42716881
chr18 57274579 57274585 ZNF354C JASPAR yes 111034861
chr18 57274583 57274594 FOXH1 JASPAR yes 42716882
chr18 57274583 57274594 FOXH1 JASPAR yes 111034862
chr18 57274601 57274614 SMAD2 JASPAR yes 42716883
chr18 57274601 57274614 SMAD2 JASPAR yes 111034863
SNP sites on vista27645[chr18:57274287-57274609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 57274289 rs59954169 GAA G
FOXP1 IRF1
5294015
chr18 57274289 rs759619009 GAA G
FOXP1 IRF1
5294016
chr18 57274289 rs796983239 GAA G
FOXP1 IRF1
5294017
chr18 57274384 rs117298334 G A no 5294018
chr18 57274483 rs186984147 T C
GATA2 NFYA
5294019
chr18 57274507 rs61268092 C T no 5294020
chr18 57274513 rs12457013 A G no 5294021
Genes possibly regulated by vista27645[chr18:57274287-57274609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 57098172 57364612 - CCBE1 ENSG00000183287.9 57364612 0.85 0.92 16620 9997
Expression level of Genes
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miRNAs possibly regulated by vista27645[chr18:57274287-57274609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results