EnhancerDB
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  3. vista27650[chr18:57541463-57541721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27650[chr18:57541463-57541721]
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Tissue distribution of vista27650
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Transcription factor that possibly regulate vista27650[chr18:57541463-57541721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 57541375 57541831 JUND UCSC Txn Factor no Conserved 108338745
chr18 57541462 57541707 RUNX3 UCSC Txn Factor no Conserved 108338757
chr18 57541480 57541487 TBP TRANSFAC yes 42717074
chr18 57541480 57541487 TFIID TRANSFAC yes 42717075
chr18 57541480 57541487 TBP TRANSFAC yes 111059498
chr18 57541480 57541487 TFIID TRANSFAC yes 111059499
chr18 57541508 57541518 NFKB1 JASPAR yes 42717076
chr18 57541508 57541518 NFKB1 JASPAR yes 111059500
chr18 57541515 57541531 SRF JASPAR yes 42717077
chr18 57541515 57541531 SRF JASPAR yes 111059501
chr18 57541521 57541525 YY1 TRANSFAC yes 42717078
chr18 57541521 57541525 YY1 TRANSFAC yes 111059502
chr18 57541526 57541530 ESR1 TRANSFAC yes 42717079
chr18 57541526 57541530 ESR1 TRANSFAC yes 111059503
chr18 57541529 57541533 YY1 TRANSFAC yes 42717080
chr18 57541529 57541533 YY1 TRANSFAC yes 111059504
chr18 57541535 57541549 TCF7L2 JASPAR yes 42717081
chr18 57541535 57541549 TCF7L2 JASPAR yes 111059505
chr18 57541535 57541550 LEF1 JASPAR yes 42717082
chr18 57541535 57541550 LEF1 JASPAR yes 111059506
chr18 57541539 57541547 LEF1 TRANSFAC yes 42717083
chr18 57541539 57541547 LEF1 TRANSFAC yes 111059507
chr18 57541549 57541560 NFIL3 JASPAR yes 42717084
chr18 57541549 57541560 NFIL3 JASPAR yes 111059508
chr18 57541550 57541561 CEBPB JASPAR yes 42717085
chr18 57541550 57541561 CEBPB JASPAR yes 111059509
chr18 57541550 57541562 DBP JASPAR yes 42717086
chr18 57541550 57541562 JDP2 JASPAR yes 42717087
chr18 57541550 57541562 DBP JASPAR yes 111059510
chr18 57541550 57541562 JDP2 JASPAR yes 111059511
chr18 57541550 57541563 ATF4 JASPAR yes 42717088
chr18 57541550 57541563 ATF4 JASPAR yes 111059512
chr18 57541550 57541565 JUND JASPAR yes 42717089
chr18 57541550 57541565 JUND JASPAR yes 111059513
chr18 57541551 57541564 JUN JASPAR yes 42717090
chr18 57541551 57541564 JUN JASPAR yes 111059514
chr18 57541565 57541580 FOXP1 JASPAR yes 42717091
chr18 57541565 57541580 FOXP1 JASPAR yes 111059515
chr18 57541566 57541575 SRY JASPAR yes 42717092
chr18 57541566 57541575 SRY JASPAR yes 111059516
chr18 57541566 57541577 FOXP2 JASPAR yes 42717093
chr18 57541566 57541577 FOXP2 JASPAR yes 111059517
chr18 57541568 57541576 FOXO3 JASPAR yes 42717094
chr18 57541568 57541576 FOXO3 JASPAR yes 111059518
chr18 57541594 57541599 ETS2 TRANSFAC yes 42717095
chr18 57541594 57541599 ETS2 TRANSFAC yes 111059519
chr18 57541607 57541614 TBP TRANSFAC yes 42717096
chr18 57541607 57541614 TFIID TRANSFAC yes 42717097
chr18 57541607 57541614 TBP TRANSFAC yes 111059520
chr18 57541607 57541614 TFIID TRANSFAC yes 111059521
chr18 57541618 57541628 SREBF2 JASPAR yes 42717098
chr18 57541618 57541628 SREBF2 JASPAR yes 111059522
chr18 57541618 57541632 JUN JASPAR yes 42717099
chr18 57541618 57541632 JUN JASPAR yes 111059523
chr18 57541621 57541632 FOSL2 JASPAR yes 42717100
chr18 57541621 57541632 JUNB JASPAR yes 42717101
chr18 57541621 57541632 FOSL2 JASPAR yes 111059524
chr18 57541621 57541632 JUNB JASPAR yes 111059525
chr18 57541622 57541633 FOS JASPAR yes 42717102
chr18 57541622 57541633 FOSL1 JASPAR yes 42717103
chr18 57541622 57541633 JUND JASPAR yes 42717104
chr18 57541622 57541633 NFE2 JASPAR yes 42717105
chr18 57541622 57541633 FOS JASPAR yes 111059526
chr18 57541622 57541633 FOSL1 JASPAR yes 111059527
chr18 57541622 57541633 JUND JASPAR yes 111059528
chr18 57541622 57541633 NFE2 JASPAR yes 111059529
chr18 57541623 57541630 JUN TRANSFAC yes 42717106
chr18 57541623 57541630 JUN TRANSFAC yes 111059530
chr18 57541623 57541632 JDP2 JASPAR yes 42717107
chr18 57541623 57541632 JDP2 JASPAR yes 111059531
chr18 57541623 57541634 FOSL2 JASPAR yes 42717108
chr18 57541623 57541634 JUNB JASPAR yes 42717109
chr18 57541623 57541634 FOSL2 JASPAR yes 111059532
chr18 57541623 57541634 JUNB JASPAR yes 111059533
chr18 57541623 57541637 JUN JASPAR yes 42717110
chr18 57541623 57541637 JUN JASPAR yes 111059534
chr18 57541624 57541635 BATF JASPAR yes 42717111
chr18 57541624 57541635 BATF JASPAR yes 111059535
chr18 57541642 57541654 PKNOX1 JASPAR yes 42717112
chr18 57541642 57541654 PKNOX2 JASPAR yes 42717113
chr18 57541642 57541654 TGIF1 JASPAR yes 42717114
chr18 57541642 57541654 TGIF2 JASPAR yes 42717115
chr18 57541642 57541654 PKNOX1 JASPAR yes 111059536
chr18 57541642 57541654 PKNOX2 JASPAR yes 111059537
chr18 57541642 57541654 TGIF1 JASPAR yes 111059538
chr18 57541642 57541654 TGIF2 JASPAR yes 111059539
chr18 57541645 57541656 NFE2 JASPAR yes 42717116
chr18 57541645 57541656 NFE2 JASPAR yes 111059540
chr18 57541646 57541655 JDP2 JASPAR yes 42717117
chr18 57541646 57541655 JDP2 JASPAR yes 111059541
chr18 57541656 57541672 ZNF143 JASPAR yes 42717118
chr18 57541656 57541672 ZNF143 JASPAR yes 111059542
chr18 57541676 57541680 NFE TRANSFAC yes 42717119
chr18 57541676 57541680 NFE TRANSFAC yes 111059543
chr18 57541687 57541701 PAX6 JASPAR yes 42717120
chr18 57541687 57541701 PAX6 JASPAR yes 111059544
chr18 57541711 57541724 NFKB1 JASPAR yes 42717121
chr18 57541711 57541724 NFKB1 JASPAR yes 111059545
SNP sites on vista27650[chr18:57541463-57541721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 57541539 rs144535132 G A
JUND LEF1 RUNX3 TCF7L2
5296557
Genes possibly regulated by vista27650[chr18:57541463-57541721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 57567180 57571538 + PMAIP1 ENSG00000141682.11 57567180 0.97 1.0 16621 74541
Expression level of Genes
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miRNAs possibly regulated by vista27650[chr18:57541463-57541721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results