EnhancerDB
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  3. vista2794[chr1:108478082-108478329]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2794[chr1:108478082-108478329]
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Tissue distribution of vista2794
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Transcription factor that possibly regulate vista2794[chr1:108478082-108478329]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108477937 108478462 NFIC UCSC Txn Factor no Conserved 107817620
chr1 108477962 108478419 RUNX3 UCSC Txn Factor no Conserved 107817622
chr1 108478022 108478395 FOXM1 UCSC Txn Factor no Conserved 107817627
chr1 108478022 108478396 ATF2 UCSC Txn Factor no Conserved 107817629
chr1 108478029 108478414 EP300 UCSC Txn Factor no Conserved 107817631
chr1 108478033 108478448 MTA3 UCSC Txn Factor no Conserved 107817632
chr1 108478054 108478327 MEF2A UCSC Txn Factor no Conserved 107817638
chr1 108478054 108478422 EBF1 UCSC Txn Factor no Conserved 107817640
chr1 108478062 108478386 NFATC1 UCSC Txn Factor no Conserved 107817643
chr1 108478072 108478316 MEF2C UCSC Txn Factor no Conserved 107817645
chr1 108478083 108478413 BHLHE40 UCSC Txn Factor no Conserved 107817650
chr1 108478102 108478372 BATF UCSC Txn Factor no Conserved 107817653
chr1 108478115 108478357 BCL11A UCSC Txn Factor no Conserved 107817656
chr1 108478116 108478374 IRF4 UCSC Txn Factor no Conserved 107817658
chr1 108478165 108478374 PAX5 UCSC Txn Factor no Conserved 107817666
chr1 108478199 108478456 SPI1 UCSC Txn Factor no Conserved 107817671
chr1 108478087 108478103 SOX8 JASPAR yes 31370312
chr1 108478087 108478103 SOX8 JASPAR yes 118344210
chr1 108478102 108478123 IRF1 JASPAR yes 31370313
chr1 108478102 108478123 IRF1 JASPAR yes 118344211
chr1 108478105 108478119 IRF7 JASPAR yes 31370314
chr1 108478105 108478119 IRF7 JASPAR yes 118344212
chr1 108478107 108478119 IRF1 JASPAR yes 31370315
chr1 108478107 108478119 IRF1 JASPAR yes 118344213
chr1 108478107 108478122 STAT2 JASPAR yes 31370316
chr1 108478107 108478122 STAT2 JASPAR yes 118344214
chr1 108478128 108478139 FOXH1 JASPAR yes 31370317
chr1 108478128 108478139 FOXH1 JASPAR yes 118344215
chr1 108478135 108478143 HOXA5 JASPAR yes 31370318
chr1 108478135 108478143 HOXA5 JASPAR yes 118344216
chr1 108478140 108478160 PPARG JASPAR yes 31370319
chr1 108478140 108478160 PPARG JASPAR yes 118344217
chr1 108478144 108478148 H4TF2 TRANSFAC yes 31370320
chr1 108478144 108478148 H4TF2 TRANSFAC yes 118344218
chr1 108478153 108478168 MEF2C JASPAR yes 31370321
chr1 108478153 108478168 MEF2C JASPAR yes 118344219
chr1 108478154 108478169 MEF2A JASPAR yes 31370322
chr1 108478154 108478169 MEF2A JASPAR yes 118344220
chr1 108478155 108478167 MEF2A JASPAR yes 31370323
chr1 108478155 108478167 MEF2B JASPAR yes 31370324
chr1 108478155 108478167 MEF2D JASPAR yes 31370325
chr1 108478155 108478167 MEF2A JASPAR yes 118344221
chr1 108478155 108478167 MEF2B JASPAR yes 118344222
chr1 108478155 108478167 MEF2D JASPAR yes 118344223
chr1 108478156 108478166 MEF2A JASPAR yes 31370326
chr1 108478156 108478166 MEF2A JASPAR yes 118344224
chr1 108478174 108478184 MZF1 JASPAR yes 31370327
chr1 108478174 108478184 MZF1 JASPAR yes 118344225
chr1 108478175 108478181 MZF1 JASPAR yes 31370328
chr1 108478175 108478181 MZF1 JASPAR yes 118344226
chr1 108478183 108478197 SPIC JASPAR yes 31370329
chr1 108478183 108478197 SPIC JASPAR yes 118344227
chr1 108478197 108478201 YY1 TRANSFAC yes 31370330
chr1 108478197 108478201 YY1 TRANSFAC yes 118344228
chr1 108478211 108478222 FOS JASPAR yes 31370331
chr1 108478211 108478222 FOS JASPAR yes 118344229
chr1 108478212 108478223 JUNB JASPAR yes 31370332
chr1 108478212 108478223 JUNB JASPAR yes 118344230
chr1 108478213 108478224 BATF JASPAR yes 31370333
chr1 108478213 108478224 BATF JASPAR yes 118344231
chr1 108478229 108478243 JUN JASPAR yes 31370334
chr1 108478229 108478243 JUN JASPAR yes 118344232
chr1 108478230 108478236 HiNF-A TRANSFAC yes 31370335
chr1 108478230 108478236 HiNF-A TRANSFAC yes 118344233
chr1 108478231 108478242 BATF JASPAR yes 31370336
chr1 108478231 108478242 BATF JASPAR yes 118344234
chr1 108478231 108478245 SPIC JASPAR yes 31370337
chr1 108478231 108478245 SPIC JASPAR yes 118344235
chr1 108478232 108478243 JUNB JASPAR yes 31370338
chr1 108478232 108478243 JUNB JASPAR yes 118344236
chr1 108478233 108478244 FOS JASPAR yes 31370339
chr1 108478233 108478244 FOS JASPAR yes 118344237
chr1 108478235 108478241 JUN TRANSFAC yes 31370340
chr1 108478235 108478241 JUN TRANSFAC yes 118344238
chr1 108478238 108478257 PAX5 JASPAR yes 31370341
chr1 108478238 108478257 PAX5 JASPAR yes 118344239
chr1 108478241 108478258 PAX1 JASPAR yes 31370342
chr1 108478241 108478258 PAX9 JASPAR yes 31370343
chr1 108478241 108478258 PAX1 JASPAR yes 118344240
chr1 108478241 108478258 PAX9 JASPAR yes 118344241
chr1 108478243 108478257 PAX6 JASPAR yes 31370344
chr1 108478243 108478257 PAX6 JASPAR yes 118344242
chr1 108478252 108478266 RORA JASPAR yes 31370345
chr1 108478252 108478266 RORA JASPAR yes 118344243
chr1 108478253 108478263 RORA JASPAR yes 31370346
chr1 108478253 108478263 RORA JASPAR yes 118344244
chr1 108478323 108478329 SOX10 JASPAR yes 31370347
chr1 108478323 108478329 SOX10 JASPAR yes 118344245
chr1 108478323 108478337 SPI1 JASPAR yes 31370348
chr1 108478323 108478337 SPIC JASPAR yes 31370349
chr1 108478323 108478337 SPI1 JASPAR yes 118344246
chr1 108478323 108478337 SPIC JASPAR yes 118344247
chr1 108478327 108478337 ETV6 JASPAR yes 31370350
chr1 108478327 108478337 ETV6 JASPAR yes 118344248
chr1 108478329 108478334 ETS2 TRANSFAC yes 31370351
chr1 108478329 108478334 ETS2 TRANSFAC yes 118344249
SNP sites on vista2794[chr1:108478082-108478329]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108478250 rs565393802 T C
ATF2 BATF BCL11A BHLHE40 EBF1 EP300 FOXM1 IRF4 MEF2A MEF2C MTA3 NFATC1 NFIC PAX1 PAX5 PAX6 PAX9 RUNX3 SPI1
540164
chr1 108478253 rs10494086 G A
ATF2 BATF BCL11A BHLHE40 EBF1 EP300 FOXM1 IRF4 MEF2A MEF2C MTA3 NFATC1 NFIC PAX1 PAX5 PAX6 PAX9 RORA RUNX3 SPI1
540165
Genes possibly regulated by vista2794[chr1:108478082-108478329]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108113782 108507766 - VAV3 ENSG00000134215.11 108507766 0.95 0.93 954 70563
Expression level of Genes
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miRNAs possibly regulated by vista2794[chr1:108478082-108478329]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results