EnhancerDB
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  3. vista28[chr1:1136667-1137146]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28[chr1:1136667-1137146]
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Tissue distribution of vista28
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Transcription factor that possibly regulate vista28[chr1:1136667-1137146]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1136669 1136679 ZNF740 JASPAR yes 26186870
chr1 1136669 1136679 ZNF740 JASPAR yes 118214399
chr1 1136669 1136684 ZIC3 JASPAR yes 26186871
chr1 1136669 1136684 ZIC3 JASPAR yes 118214400
chr1 1136673 1136687 PLAG1 JASPAR yes 26186872
chr1 1136673 1136687 PLAG1 JASPAR yes 118214401
chr1 1136678 1136697 CTCF JASPAR yes 26186873
chr1 1136678 1136697 CTCF JASPAR yes 118214402
chr1 1136683 1136696 TFAP2A JASPAR yes 26186874
chr1 1136683 1136696 TFAP2B JASPAR yes 26186875
chr1 1136683 1136696 TFAP2C JASPAR yes 26186876
chr1 1136683 1136696 TFAP2A JASPAR yes 118214403
chr1 1136683 1136696 TFAP2B JASPAR yes 118214404
chr1 1136683 1136696 TFAP2C JASPAR yes 118214405
chr1 1136684 1136695 EBF1 JASPAR yes 26186877
chr1 1136684 1136695 EBF1 JASPAR yes 118214406
chr1 1136694 1136702 WT1 TRANSFAC yes 26186878
chr1 1136694 1136702 WT1 TRANSFAC yes 118214407
chr1 1136696 1136705 SP1 TRANSFAC yes 26186879
chr1 1136696 1136705 SP1 TRANSFAC yes 118214408
chr1 1136697 1136703 SP1 TRANSFAC yes 26186880
chr1 1136697 1136703 SP1 TRANSFAC yes 118214409
chr1 1136697 1136707 SP1 JASPAR yes 26186881
chr1 1136697 1136707 SP1 JASPAR yes 118214410
chr1 1136698 1136705 SP1 TRANSFAC yes 26186882
chr1 1136698 1136705 SP1 TRANSFAC yes 118214411
chr1 1136699 1136704 SP1 TRANSFAC yes 26186883
chr1 1136699 1136704 SP1 TRANSFAC yes 118214412
chr1 1136699 1136705 SP1 TRANSFAC yes 26186884
chr1 1136699 1136705 SP1 TRANSFAC yes 118214413
chr1 1136699 1136706 SP1 TRANSFAC yes 26186885
chr1 1136699 1136706 SP1 TRANSFAC yes 118214414
chr1 1136719 1136724 SP1 TRANSFAC yes 26186886
chr1 1136719 1136724 SP1 TRANSFAC yes 118214415
chr1 1136724 1136734 SP1 JASPAR yes 26186887
chr1 1136724 1136734 SP1 JASPAR yes 118214416
chr1 1136727 1136735 SP1 TRANSFAC yes 26186888
chr1 1136727 1136735 SP1 TRANSFAC yes 118214417
chr1 1136729 1136738 TFAP2A JASPAR yes 26186889
chr1 1136729 1136738 TFAP2A JASPAR yes 118214418
chr1 1136753 1136758 SP1 TRANSFAC yes 26186890
chr1 1136753 1136758 SP1 TRANSFAC yes 118214419
chr1 1136758 1136764 SP1 TRANSFAC yes 26186891
chr1 1136758 1136764 SP1 TRANSFAC yes 118214420
chr1 1136767 1136776 TFAP2A JASPAR yes 26186892
chr1 1136767 1136776 TFAP2A JASPAR yes 118214421
chr1 1136799 1136807 SP1 TRANSFAC yes 26186893
chr1 1136799 1136807 SP1 TRANSFAC yes 118214422
chr1 1136800 1136805 SP1 TRANSFAC yes 26186894
chr1 1136800 1136805 SP1 TRANSFAC yes 118214423
chr1 1136801 1136806 SP1 TRANSFAC yes 26186895
chr1 1136801 1136806 SP1 TRANSFAC yes 118214424
chr1 1136821 1136839 ESR1 JASPAR yes 26186896
chr1 1136821 1136839 ESR1 JASPAR yes 118214425
chr1 1136833 1136841 SP1 TRANSFAC yes 26186897
chr1 1136833 1136841 SP1 TRANSFAC yes 118214426
chr1 1136833 1136843 SP1 JASPAR yes 26186898
chr1 1136833 1136843 SP1 JASPAR yes 118214427
chr1 1136834 1136840 SP1 TRANSFAC yes 26186899
chr1 1136834 1136840 SP1 TRANSFAC yes 118214428
chr1 1136834 1136844 SP1 JASPAR yes 26186900
chr1 1136834 1136844 SP1 JASPAR yes 118214429
chr1 1136836 1136841 SP1 TRANSFAC yes 26186901
chr1 1136836 1136841 SP1 TRANSFAC yes 118214430
chr1 1136855 1136860 SP1 TRANSFAC yes 26186902
chr1 1136855 1136860 SP1 TRANSFAC yes 118214431
chr1 1136860 1136873 NFKB1 JASPAR yes 26186903
chr1 1136860 1136873 NFKB1 JASPAR yes 118214432
chr1 1136862 1136873 NFKB1 JASPAR yes 26186904
chr1 1136862 1136873 NFKB1 JASPAR yes 118214433
chr1 1136863 1136873 RELA JASPAR yes 26186905
chr1 1136863 1136873 REL JASPAR yes 26186906
chr1 1136863 1136873 RELA JASPAR yes 118214434
chr1 1136863 1136873 REL JASPAR yes 118214435
chr1 1136869 1136875 SP1 TRANSFAC yes 26186907
chr1 1136869 1136875 SP1 TRANSFAC yes 118214436
chr1 1136871 1136876 SP1 TRANSFAC yes 26186908
chr1 1136871 1136876 SP1 TRANSFAC yes 118214437
chr1 1136873 1136885 HINFP JASPAR yes 26186909
chr1 1136873 1136885 HINFP JASPAR yes 118214438
chr1 1136885 1136891 ATF1 TRANSFAC yes 26186910
chr1 1136885 1136891 ATF1 TRANSFAC yes 118214439
chr1 1136885 1136897 CREB1 JASPAR yes 26186911
chr1 1136885 1136897 CREB1 JASPAR yes 118214440
chr1 1136898 1136903 SP1 TRANSFAC yes 26186912
chr1 1136898 1136903 SP1 TRANSFAC yes 118214441
chr1 1136898 1136904 SP1 TRANSFAC yes 26186913
chr1 1136898 1136904 SP1 TRANSFAC yes 118214442
chr1 1136898 1136905 SP1 TRANSFAC yes 26186914
chr1 1136898 1136905 SP1 TRANSFAC yes 118214443
chr1 1136899 1136907 WT1 TRANSFAC yes 26186915
chr1 1136899 1136907 WT1 TRANSFAC yes 118214444
chr1 1136907 1136921 CREB3 JASPAR yes 26186916
chr1 1136907 1136921 CREB3 JASPAR yes 118214445
chr1 1136908 1136922 XBP1 JASPAR yes 26186917
chr1 1136908 1136922 XBP1 JASPAR yes 118214446
chr1 1136910 1136915 ATF1 TRANSFAC yes 26186918
chr1 1136910 1136915 ATF1 TRANSFAC yes 118214447
chr1 1136915 1136921 ETS1 JASPAR yes 26186919
chr1 1136915 1136921 ETS1 JASPAR yes 118214448
chr1 1136916 1136923 E2F1 TRANSFAC yes 26186920
chr1 1136916 1136923 E2F1 TRANSFAC yes 118214449
chr1 1136940 1136945 SP1 TRANSFAC yes 26186921
chr1 1136940 1136945 SP1 TRANSFAC yes 118214450
chr1 1136949 1136960 NFKB1 JASPAR yes 26186922
chr1 1136949 1136960 NFKB1 JASPAR yes 118214451
chr1 1136954 1136960 ETS1 JASPAR yes 26186923
chr1 1136954 1136960 ETS1 JASPAR yes 118214452
chr1 1136955 1136962 E2F1 TRANSFAC yes 26186924
chr1 1136955 1136962 E2F1 TRANSFAC yes 118214453
chr1 1136960 1136971 JUNB JASPAR yes 26186925
chr1 1136960 1136971 NFE2L2 JASPAR yes 26186926
chr1 1136960 1136971 JUNB JASPAR yes 118214454
chr1 1136960 1136971 NFE2L2 JASPAR yes 118214455
chr1 1136961 1136972 FOS JASPAR yes 26186927
chr1 1136961 1136972 FOSL1 JASPAR yes 26186928
chr1 1136961 1136972 JUND JASPAR yes 26186929
chr1 1136961 1136972 FOS JASPAR yes 118214456
chr1 1136961 1136972 FOSL1 JASPAR yes 118214457
chr1 1136961 1136972 JUND JASPAR yes 118214458
chr1 1136962 1136973 FOSL2 JASPAR yes 26186930
chr1 1136962 1136973 JUNB JASPAR yes 26186931
chr1 1136962 1136973 FOSL2 JASPAR yes 118214459
chr1 1136962 1136973 JUNB JASPAR yes 118214460
chr1 1136962 1136976 JUN JASPAR yes 26186932
chr1 1136962 1136976 JUN JASPAR yes 118214461
chr1 1136963 1136970 JUN TRANSFAC yes 26186933
chr1 1136963 1136970 JUN TRANSFAC yes 118214462
chr1 1136963 1136974 BATF JASPAR yes 26186934
chr1 1136963 1136974 BATF JASPAR yes 118214463
chr1 1136967 1136982 ZBTB33 JASPAR yes 26186935
chr1 1136967 1136982 ZBTB33 JASPAR yes 118214464
chr1 1136969 1136983 EBF1 JASPAR yes 26186936
chr1 1136969 1136983 EBF1 JASPAR yes 118214465
chr1 1136970 1136985 ZBTB33 JASPAR yes 26186937
chr1 1136970 1136985 ZBTB33 JASPAR yes 118214466
chr1 1136986 1137002 GLIS1 JASPAR yes 26186938
chr1 1136986 1137002 GLIS1 JASPAR yes 118214467
chr1 1137006 1137018 INSM1 JASPAR yes 26186939
chr1 1137006 1137018 INSM1 JASPAR yes 118214468
chr1 1137011 1137016 SP1 TRANSFAC yes 26186940
chr1 1137011 1137016 SP1 TRANSFAC yes 118214469
chr1 1137011 1137018 SP1 TRANSFAC yes 26186941
chr1 1137011 1137018 SP1 TRANSFAC yes 118214470
chr1 1137021 1137034 NFKB2 JASPAR yes 26186942
chr1 1137021 1137034 NFKB2 JASPAR yes 118214471
chr1 1137022 1137033 NFKB1 JASPAR yes 26186943
chr1 1137022 1137033 NFKB1 JASPAR yes 118214472
chr1 1137023 1137033 NFKB1 JASPAR yes 26186944
chr1 1137023 1137033 NFKB1 JASPAR yes 118214473
chr1 1137032 1137046 GLIS2 JASPAR yes 26186945
chr1 1137032 1137046 GLIS3 JASPAR yes 26186946
chr1 1137032 1137046 GLIS2 JASPAR yes 118214474
chr1 1137032 1137046 GLIS3 JASPAR yes 118214475
chr1 1137034 1137044 ZNF740 JASPAR yes 26186947
chr1 1137034 1137044 ZNF740 JASPAR yes 118214476
chr1 1137035 1137047 ZBTB7B JASPAR yes 26186948
chr1 1137035 1137047 ZBTB7B JASPAR yes 118214477
chr1 1137036 1137046 ZNF740 JASPAR yes 26186949
chr1 1137036 1137046 ZNF740 JASPAR yes 118214478
chr1 1137048 1137053 TFAP2A TRANSFAC yes 26186950
chr1 1137048 1137053 TFAP2A TRANSFAC yes 118214479
chr1 1137048 1137054 MZF1 JASPAR yes 26186951
chr1 1137048 1137054 MZF1 JASPAR yes 118214480
chr1 1137059 1137064 SP1 TRANSFAC yes 26186952
chr1 1137059 1137064 SP1 TRANSFAC yes 118214481
chr1 1137065 1137070 SP1 TRANSFAC yes 26186953
chr1 1137065 1137070 SP1 TRANSFAC yes 118214482
chr1 1137066 1137071 SP1 TRANSFAC yes 26186954
chr1 1137066 1137071 SP1 TRANSFAC yes 118214483
chr1 1137066 1137072 SP1 TRANSFAC yes 26186955
chr1 1137066 1137072 SP1 TRANSFAC yes 118214484
chr1 1137102 1137106 LFA1 TRANSFAC yes 26186956
chr1 1137102 1137106 LFA1 TRANSFAC yes 118214485
chr1 1137126 1137135 TFAP2A JASPAR yes 26186957
chr1 1137126 1137135 TFAP2A JASPAR yes 118214486
chr1 1137130 1137144 PLAG1 JASPAR yes 26186958
chr1 1137130 1137144 PLAG1 JASPAR yes 118214487
SNP sites on vista28[chr1:1136667-1137146]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1136668 rs182292802 G A,C no 4360
chr1 1136753 rs186608774 T C
SP1
4361
chr1 1136855 rs370210658 G A
SP1
4362
chr1 1137071 rs551291702 G T
SP1
4363
chr1 1137081 rs561579511 G C no 4364
chr1 1137123 rs535714992 GC G no 4365
Genes possibly regulated by vista28[chr1:1136667-1137146]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 15074
chr1 1109264 1133315 + TTLL10 ENSG00000162571.9 1109264 0.93 1.0 16 72597
chr1 1138888 1142071 - TNFRSF18 ENSG00000186891.9 1142071 0.88 1.0 17 95075
chr1 1146706 1149518 - TNFRSF4 ENSG00000186827.6 1149518 0.86 1.0 18 87628
chr1 1152288 1167411 - SDF4 ENSG00000078808.12 1167411 0.56 1.0 19 69735
chr1 1167629 1170421 + B3GALT6 ENSG00000176022.3 1167629 0.6 0.99 20 69517
chr1 1177826 1182102 - FAM132A ENSG00000184163.3 1182102 0.9 0.99 21 55044
chr1 1189289 1209265 - UBE2J2 ENSG00000160087.16 1209265 0.6 0.99 22 27881
chr1 1215816 1227409 + SCNN1D ENSG00000162572.15 1215816 0.8 1.0 23 21330
Expression level of Genes
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miRNAs possibly regulated by vista28[chr1:1136667-1137146]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results