EnhancerDB
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  3. vista2801[chr1:108584121-108584359]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2801[chr1:108584121-108584359]
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Tissue distribution of vista2801
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Transcription factor that possibly regulate vista2801[chr1:108584121-108584359]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108584118 108584123 ETS2 TRANSFAC yes 31378794
chr1 108584118 108584123 ETS2 TRANSFAC yes 118344622
chr1 108584118 108584128 TEAD1 JASPAR yes 31378795
chr1 108584118 108584128 TEAD4 JASPAR yes 31378796
chr1 108584118 108584128 TEAD1 JASPAR yes 118344623
chr1 108584118 108584128 TEAD4 JASPAR yes 118344624
chr1 108584129 108584140 FOXA1 JASPAR yes 31378797
chr1 108584129 108584140 FOXA1 JASPAR yes 118344625
chr1 108584158 108584163 ETS2 TRANSFAC yes 31378798
chr1 108584158 108584163 ETS2 TRANSFAC yes 118344626
chr1 108584165 108584176 NRL JASPAR yes 31378799
chr1 108584165 108584176 NRL JASPAR yes 118344627
chr1 108584172 108584183 HOXA10 JASPAR yes 31378800
chr1 108584172 108584183 HOXA10 JASPAR yes 118344628
chr1 108584173 108584183 HOXD13 JASPAR yes 31378801
chr1 108584173 108584183 HOXD13 JASPAR yes 118344629
chr1 108584174 108584185 PROP1 JASPAR yes 31378802
chr1 108584174 108584185 PROP1 JASPAR yes 118344630
chr1 108584182 108584196 JUN JASPAR yes 31378803
chr1 108584182 108584196 JUN JASPAR yes 118344631
chr1 108584183 108584194 BATF JASPAR yes 31378804
chr1 108584183 108584194 BATF JASPAR yes 118344632
chr1 108584188 108584192 YY1 TRANSFAC yes 31378805
chr1 108584188 108584192 YY1 TRANSFAC yes 118344633
chr1 108584220 108584235 HNF1A JASPAR yes 31378806
chr1 108584220 108584235 HNF1A JASPAR yes 118344634
chr1 108584233 108584251 SRF JASPAR yes 31378807
chr1 108584233 108584251 SRF JASPAR yes 118344635
chr1 108584244 108584248 LFA1 TRANSFAC yes 31378808
chr1 108584244 108584248 LFA1 TRANSFAC yes 118344636
chr1 108584250 108584254 YY1 TRANSFAC yes 31378809
chr1 108584250 108584254 YY1 TRANSFAC yes 118344637
chr1 108584264 108584271 MEIS1 JASPAR yes 31378810
chr1 108584264 108584271 MEIS1 JASPAR yes 118344638
chr1 108584264 108584272 MEIS2 JASPAR yes 31378811
chr1 108584264 108584272 MEIS3 JASPAR yes 31378812
chr1 108584264 108584272 MEIS2 JASPAR yes 118344639
chr1 108584264 108584272 MEIS3 JASPAR yes 118344640
chr1 108584285 108584289 YY1 TRANSFAC yes 31378813
chr1 108584285 108584289 YY1 TRANSFAC yes 118344641
chr1 108584293 108584303 TEAD1 JASPAR yes 31378814
chr1 108584293 108584303 TEAD4 JASPAR yes 31378815
chr1 108584293 108584303 TEAD1 JASPAR yes 118344642
chr1 108584293 108584303 TEAD4 JASPAR yes 118344643
chr1 108584297 108584308 NRL JASPAR yes 31378816
chr1 108584297 108584308 NRL JASPAR yes 118344644
chr1 108584315 108584327 IRF1 JASPAR yes 31378817
chr1 108584315 108584327 IRF1 JASPAR yes 118344645
chr1 108584315 108584329 ONECUT2 JASPAR yes 31378818
chr1 108584315 108584329 ONECUT3 JASPAR yes 31378819
chr1 108584315 108584329 ONECUT2 JASPAR yes 118344646
chr1 108584315 108584329 ONECUT3 JASPAR yes 118344647
chr1 108584329 108584345 ZNF143 JASPAR yes 31378820
chr1 108584329 108584345 ZNF143 JASPAR yes 118344648
chr1 108584347 108584351 NFE TRANSFAC yes 31378821
chr1 108584347 108584351 NFE TRANSFAC yes 118344649
chr1 108584352 108584358 MZF1 JASPAR yes 31378822
chr1 108584352 108584358 MZF1 JASPAR yes 118344650
SNP sites on vista2801[chr1:108584121-108584359]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108584180 rs13375941 A C
HOXA10 HOXD13 PROP1
540982
Genes possibly regulated by vista2801[chr1:108584121-108584359]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108113782 108507766 - VAV3 ENSG00000134215.11 108507766 0.95 0.93 954 23645
Expression level of Genes
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miRNAs possibly regulated by vista2801[chr1:108584121-108584359]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results