EnhancerDB
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  3. vista28026[chr18:76756179-76756568]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28026[chr18:76756179-76756568]
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Tissue distribution of vista28026
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Transcription factor that possibly regulate vista28026[chr18:76756179-76756568]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 76756194 76756206 NHLH1 JASPAR yes 42735435
chr18 76756228 76756246 ESR1 JASPAR yes 42735436
chr18 76756230 76756241 FOSL2 JASPAR yes 42735437
chr18 76756240 76756259 REST JASPAR yes 42735438
chr18 76756266 76756272 YY1 JASPAR yes 42735439
chr18 76756278 76756282 NFE TRANSFAC yes 42735440
chr18 76756287 76756296 NKX2-8 JASPAR yes 42735441
chr18 76756301 76756307 TCF4 TRANSFAC yes 42735442
chr18 76756313 76756317 NFE TRANSFAC yes 42735443
chr18 76756321 76756336 HSF1 JASPAR yes 42735444
chr18 76756346 76756360 ONECUT1 JASPAR yes 42735445
chr18 76756346 76756360 ONECUT2 JASPAR yes 42735446
chr18 76756354 76756369 RUNX2 JASPAR yes 42735447
chr18 76756358 76756368 RUNX3 JASPAR yes 42735448
chr18 76756359 76756368 RUNX2 JASPAR yes 42735449
chr18 76756373 76756393 TP63 JASPAR yes 42735450
chr18 76756388 76756393 GATA2 JASPAR yes 42735451
chr18 76756396 76756411 TFAP2C JASPAR yes 42735452
chr18 76756397 76756406 THAP1 JASPAR yes 42735453
chr18 76756397 76756408 GCM1 JASPAR yes 42735454
chr18 76756398 76756411 TFAP2A JASPAR yes 42735455
chr18 76756398 76756411 TFAP2B JASPAR yes 42735456
chr18 76756398 76756411 TFAP2C JASPAR yes 42735457
chr18 76756398 76756413 TFAP2A JASPAR yes 42735458
chr18 76756411 76756420 THAP1 JASPAR yes 42735459
chr18 76756414 76756428 TLX1 JASPAR yes 42735460
chr18 76756415 76756424 SNAI2 JASPAR yes 42735461
chr18 76756415 76756426 USF2 JASPAR yes 42735462
chr18 76756428 76756443 HSF1 JASPAR yes 42735463
chr18 76756429 76756442 HSF1 JASPAR yes 42735464
chr18 76756429 76756442 HSF2 JASPAR yes 42735465
chr18 76756429 76756442 HSF4 JASPAR yes 42735466
chr18 76756451 76756457 LEF1 TRANSFAC yes 42735467
chr18 76756451 76756457 SOX10 JASPAR yes 42735468
chr18 76756458 76756479 IRF1 JASPAR yes 42735469
chr18 76756460 76756481 ZNF263 JASPAR yes 42735470
chr18 76756461 76756482 ZNF263 JASPAR yes 42735471
chr18 76756479 76756483 LFA1 TRANSFAC yes 42735472
chr18 76756511 76756517 TCF4 TRANSFAC yes 42735473
chr18 76756520 76756537 RARA JASPAR yes 42735474
chr18 76756521 76756540 CTCF JASPAR yes 42735475
chr18 76756527 76756537 RORA JASPAR yes 42735476
chr18 76756528 76756541 NR2F1 JASPAR yes 42735477
chr18 76756529 76756544 NR2C2 JASPAR yes 42735478
chr18 76756531 76756548 RXRA JASPAR yes 42735479
chr18 76756532 76756536 ESR1 TRANSFAC yes 42735480
chr18 76756554 76756558 LFA1 TRANSFAC yes 42735481
SNP sites on vista28026[chr18:76756179-76756568]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 76756403 rs149076508 C T
GCM1 TFAP2A TFAP2B TFAP2C THAP1
5355224
chr18 76756491 rs76344420 G C no 5355225
chr18 76756528 rs138699005 G A
CTCF NR2F1 RARA RORA
5355226
Genes possibly regulated by vista28026[chr18:76756179-76756568]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 76740275 76762677 + SALL3 ENSG00000256463.4 76740275 1.0 1.0 16682 84096
chr18 76829285 77138283 + ATP9B ENSG00000166377.15 76829285 0.71 1.0 16683 27283
Expression level of Genes
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miRNAs possibly regulated by vista28026[chr18:76756179-76756568]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results