EnhancerDB
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  3. vista28028[chr18:76828001-76828378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28028[chr18:76828001-76828378]
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Tissue distribution of vista28028
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Transcription factor that possibly regulate vista28028[chr18:76828001-76828378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 76828007 76828019 NHLH1 JASPAR yes 42735564
chr18 76828008 76828018 NHLH1 JASPAR yes 42735565
chr18 76828054 76828067 POU2F2 JASPAR yes 42735566
chr18 76828056 76828068 POU2F1 JASPAR yes 42735567
chr18 76828060 76828073 POU2F2 JASPAR yes 42735568
chr18 76828066 76828073 TBP TRANSFAC yes 42735569
chr18 76828066 76828073 TFIID TRANSFAC yes 42735570
chr18 76828077 76828081 YY1 TRANSFAC yes 42735571
chr18 76828084 76828088 TEAD2 TRANSFAC yes 42735572
chr18 76828086 76828099 POU2F2 JASPAR yes 42735573
chr18 76828111 76828131 ESR1 JASPAR yes 42735574
chr18 76828113 76828118 ETS2 TRANSFAC yes 42735575
chr18 76828115 76828135 PPARG JASPAR yes 42735576
chr18 76828116 76828124 NR4A2 JASPAR yes 42735577
chr18 76828121 76828126 USF2 TRANSFAC yes 42735578
chr18 76828134 76828155 ZNF263 JASPAR yes 42735579
chr18 76828143 76828162 PAX5 JASPAR yes 42735580
chr18 76828152 76828166 MTF1 JASPAR yes 42735581
chr18 76828167 76828171 YY1 TRANSFAC yes 42735582
chr18 76828181 76828199 ESR1 JASPAR yes 42735583
chr18 76828181 76828201 PPARG JASPAR yes 42735584
chr18 76828186 76828189 MYB TRANSFAC yes 42735585
chr18 76828201 76828216 FOXP1 JASPAR yes 42735586
chr18 76828208 76828223 FOXP1 JASPAR yes 42735587
chr18 76828208 76828229 IRF1 JASPAR yes 42735588
chr18 76828212 76828227 STAT2 JASPAR yes 42735589
chr18 76828224 76828228 YY1 TRANSFAC yes 42735590
chr18 76828228 76828232 TEAD2 TRANSFAC yes 42735591
chr18 76828254 76828260 HiNF-A TRANSFAC yes 42735592
chr18 76828278 76828291 POU2F2 JASPAR yes 42735593
chr18 76828285 76828295 NFATC3 JASPAR yes 42735594
chr18 76828304 76828313 SRY JASPAR yes 42735595
chr18 76828308 76828323 FOXP1 JASPAR yes 42735596
chr18 76828310 76828316 TBP TRANSFAC yes 42735597
chr18 76828311 76828322 FOXP2 JASPAR yes 42735598
chr18 76828315 76828321 HiNF-A TRANSFAC yes 42735599
chr18 76828319 76828325 SOX10 JASPAR yes 42735600
chr18 76828325 76828331 JUN TRANSFAC yes 42735601
chr18 76828327 76828342 HNF1A JASPAR yes 42735602
chr18 76828328 76828340 HNF1B JASPAR yes 42735603
chr18 76828328 76828341 HNF1B JASPAR yes 42735604
chr18 76828331 76828340 VENTX JASPAR yes 42735605
chr18 76828334 76828338 YY1 TRANSFAC yes 42735606
chr18 76828343 76828353 SREBF1 JASPAR yes 42735607
SNP sites on vista28028[chr18:76828001-76828378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 76828125 rs368324645 C A
ESR1 PPARG USF2
5355431
chr18 76828171 rs76943132 T C
YY1
5355432
chr18 76828188 rs624487 A G
ESR1 MYB PPARG
5355433
chr18 76828235 rs568201296 T C no 5355434
chr18 76828254 rs139065226 C T
HiNF-A
5355435
Genes possibly regulated by vista28028[chr18:76828001-76828378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 76740275 76762677 + SALL3 ENSG00000256463.4 76740275 1.0 1.0 16682 12274
chr18 76829285 77138283 + ATP9B ENSG00000166377.15 76829285 0.71 1.0 16683 99093
Expression level of Genes
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miRNAs possibly regulated by vista28028[chr18:76828001-76828378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results