EnhancerDB
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  3. vista28040[chr18:77220515-77220732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28040[chr18:77220515-77220732]
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Tissue distribution of vista28040
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Transcription factor that possibly regulate vista28040[chr18:77220515-77220732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77220304 77221067 POLR2A UCSC Txn Factor no Conserved 108343098
chr18 77220441 77220757 EBF1 UCSC Txn Factor no Conserved 108343101
chr18 77220453 77220763 POU2F2 UCSC Txn Factor no Conserved 108343102
chr18 77220510 77220525 TFAP2A JASPAR yes 42736244
chr18 77220510 77220525 TFAP2C JASPAR yes 42736245
chr18 77220510 77220525 TFAP2A JASPAR yes 111819302
chr18 77220510 77220525 TFAP2C JASPAR yes 111819303
chr18 77220524 77220541 NR3C1 JASPAR yes 42736246
chr18 77220524 77220541 NR3C2 JASPAR yes 42736247
chr18 77220524 77220541 NR3C1 JASPAR yes 111819304
chr18 77220524 77220541 NR3C2 JASPAR yes 111819305
chr18 77220565 77220569 YY1 TRANSFAC yes 42736248
chr18 77220565 77220569 YY1 TRANSFAC yes 111819306
chr18 77220576 77220588 POU2F1 JASPAR yes 42736249
chr18 77220576 77220588 POU2F1 JASPAR yes 111819307
chr18 77220576 77220589 POU3F3 JASPAR yes 42736250
chr18 77220576 77220589 POU3F3 JASPAR yes 111819308
chr18 77220576 77220590 POU1F1 JASPAR yes 42736251
chr18 77220576 77220590 POU1F1 JASPAR yes 111819309
chr18 77220577 77220589 POU3F1 JASPAR yes 42736252
chr18 77220577 77220589 POU3F2 JASPAR yes 42736253
chr18 77220577 77220589 POU3F1 JASPAR yes 111819310
chr18 77220577 77220589 POU3F2 JASPAR yes 111819311
chr18 77220577 77220590 POU2F2 JASPAR yes 42736254
chr18 77220577 77220590 POU2F2 JASPAR yes 111819312
chr18 77220578 77220587 POU3F4 JASPAR yes 42736255
chr18 77220578 77220587 POU5F1B JASPAR yes 42736256
chr18 77220578 77220587 POU3F4 JASPAR yes 111819313
chr18 77220578 77220587 POU5F1B JASPAR yes 111819314
chr18 77220579 77220586 POU2F1 TRANSFAC yes 42736257
chr18 77220579 77220586 POU2F2 TRANSFAC yes 42736258
chr18 77220579 77220586 POU2F1 TRANSFAC yes 111819315
chr18 77220579 77220586 POU2F2 TRANSFAC yes 111819316
chr18 77220593 77220598 TFAP2A TRANSFAC yes 42736259
chr18 77220593 77220598 TFAP2A TRANSFAC yes 111819317
chr18 77220593 77220599 MZF1 JASPAR yes 42736260
chr18 77220593 77220599 MZF1 JASPAR yes 111819318
chr18 77220595 77220606 NFKB1 JASPAR yes 42736261
chr18 77220595 77220606 NFKB1 JASPAR yes 111819319
chr18 77220596 77220606 REL JASPAR yes 42736262
chr18 77220596 77220606 REL JASPAR yes 111819320
chr18 77220599 77220609 NFIA JASPAR yes 42736263
chr18 77220599 77220609 NFIA JASPAR yes 111819321
chr18 77220600 77220615 MEF2C JASPAR yes 42736264
chr18 77220600 77220615 MEF2C JASPAR yes 111819322
chr18 77220601 77220607 NFIC JASPAR yes 42736265
chr18 77220601 77220607 NFIC JASPAR yes 111819323
chr18 77220601 77220616 MEF2A JASPAR yes 42736266
chr18 77220601 77220616 MEF2A JASPAR yes 111819324
chr18 77220602 77220614 MEF2B JASPAR yes 42736267
chr18 77220602 77220614 MEF2B JASPAR yes 111819325
chr18 77220610 77220624 SPIC JASPAR yes 42736268
chr18 77220610 77220624 SPIC JASPAR yes 111819326
chr18 77220616 77220629 POU2F2 JASPAR yes 42736269
chr18 77220616 77220629 POU2F2 JASPAR yes 111819327
chr18 77220624 77220628 YY1 TRANSFAC yes 42736270
chr18 77220624 77220628 YY1 TRANSFAC yes 111819328
chr18 77220629 77220633 NFE TRANSFAC yes 42736271
chr18 77220629 77220633 NFE TRANSFAC yes 111819329
chr18 77220641 77220645 LFA1 TRANSFAC yes 42736272
chr18 77220641 77220645 LFA1 TRANSFAC yes 111819330
chr18 77220656 77220663 SPIB JASPAR yes 42736273
chr18 77220656 77220663 SPIB JASPAR yes 111819331
chr18 77220657 77220665 EHF JASPAR yes 42736274
chr18 77220657 77220665 EHF JASPAR yes 111819332
chr18 77220672 77220676 YY1 TRANSFAC yes 42736275
chr18 77220672 77220676 YY1 TRANSFAC yes 111819333
chr18 77220686 77220691 ETS2 TRANSFAC yes 42736276
chr18 77220686 77220691 ETS2 TRANSFAC yes 111819334
chr18 77220724 77220730 ZNF354C JASPAR yes 42736277
chr18 77220724 77220730 ZNF354C JASPAR yes 111819335
SNP sites on vista28040[chr18:77220515-77220732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77220616 rs7236492 C T
EBF1 MEF2A POLR2A POU2F2 SPIC
5357971
chr18 77220618 rs140469374 T C
EBF1 POLR2A POU2F2 SPIC
5357972
chr18 77220644 rs7235530 G C
EBF1 LFA1 POLR2A POU2F2
5357973
Genes possibly regulated by vista28040[chr18:77220515-77220732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77155856 77289325 + NFATC1 ENSG00000131196.13 77155856 0.7 1.0 16684 35341
chr18 77275812 77276057 - AC018445.1 ENSG00000269679.1 77276057 0.94 0.0 16685 44675
Expression level of Genes
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miRNAs possibly regulated by vista28040[chr18:77220515-77220732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results