EnhancerDB
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  3. vista28041[chr18:77245359-77245518]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28041[chr18:77245359-77245518]
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Tissue distribution of vista28041
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Transcription factor that possibly regulate vista28041[chr18:77245359-77245518]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77245359 77245374 ZBTB33 JASPAR yes 42736278
chr18 77245359 77245374 ZBTB33 JASPAR yes 111821345
chr18 77245384 77245399 FOXP1 JASPAR yes 42736279
chr18 77245384 77245399 FOXP1 JASPAR yes 111821346
chr18 77245387 77245398 FOXP2 JASPAR yes 42736280
chr18 77245387 77245398 FOXP2 JASPAR yes 111821347
chr18 77245388 77245396 FOXO3 JASPAR yes 42736281
chr18 77245388 77245396 FOXO3 JASPAR yes 111821348
chr18 77245397 77245406 RUNX2 JASPAR yes 42736282
chr18 77245397 77245406 RUNX2 JASPAR yes 111821349
chr18 77245401 77245413 TEAD1 JASPAR yes 42736283
chr18 77245401 77245413 TEAD1 JASPAR yes 111821350
chr18 77245404 77245412 TEAD3 JASPAR yes 42736284
chr18 77245404 77245412 TEAD3 JASPAR yes 111821351
chr18 77245419 77245438 PAX5 JASPAR yes 42736285
chr18 77245419 77245438 PAX5 JASPAR yes 111821352
chr18 77245463 77245483 RREB1 JASPAR yes 42736286
chr18 77245463 77245483 RREB1 JASPAR yes 111821353
chr18 77245468 77245488 RREB1 JASPAR yes 42736287
chr18 77245468 77245488 RREB1 JASPAR yes 111821354
chr18 77245470 77245480 ZNF740 JASPAR yes 42736288
chr18 77245470 77245480 ZNF740 JASPAR yes 111821355
chr18 77245490 77245496 SOX10 JASPAR yes 42736289
chr18 77245490 77245496 SOX10 JASPAR yes 111821356
chr18 77245498 77245510 ZBTB7B JASPAR yes 42736290
chr18 77245498 77245510 ZBTB7C JASPAR yes 42736291
chr18 77245498 77245510 ZBTB7B JASPAR yes 111821357
chr18 77245498 77245510 ZBTB7C JASPAR yes 111821358
chr18 77245499 77245511 ZBTB7A JASPAR yes 42736292
chr18 77245499 77245511 ZBTB7A JASPAR yes 111821359
chr18 77245501 77245506 SP1 TRANSFAC yes 42736293
chr18 77245501 77245506 SP1 TRANSFAC yes 111821360
chr18 77245508 77245518 SP1 JASPAR yes 42736294
chr18 77245508 77245518 SP1 JASPAR yes 111821361
SNP sites on vista28041[chr18:77245359-77245518]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77245403 rs532410296 G T
RUNX2 TEAD1
5358352
chr18 77245430 rs572646673 G A
PAX5
5358353
chr18 77245448 rs117728822 A G no 5358354
chr18 77245489 rs80040510 G A no 5358355
chr18 77245509 rs183369920 G A
SP1 ZBTB7A ZBTB7B ZBTB7C
5358356
Genes possibly regulated by vista28041[chr18:77245359-77245518]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77155856 77289325 + NFATC1 ENSG00000131196.13 77155856 0.7 1.0 16684 10497
chr18 77275812 77276057 - AC018445.1 ENSG00000269679.1 77276057 0.94 0.0 16685 69461
Expression level of Genes
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miRNAs possibly regulated by vista28041[chr18:77245359-77245518]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results