EnhancerDB
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  3. vista2805[chr1:108593971-108594173]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2805[chr1:108593971-108594173]
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Tissue distribution of vista2805
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Transcription factor that possibly regulate vista2805[chr1:108593971-108594173]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108593957 108593971 TLX1 JASPAR yes 31380051
chr1 108593957 108593971 TLX1 JASPAR yes 118344774
chr1 108593974 108593989 FOXP1 JASPAR yes 31380052
chr1 108593974 108593989 FOXP1 JASPAR yes 118344775
chr1 108593974 108593995 IRF1 JASPAR yes 31380053
chr1 108593974 108593995 IRF1 JASPAR yes 118344776
chr1 108593975 108593990 FOXP1 JASPAR yes 31380054
chr1 108593975 108593990 FOXP1 JASPAR yes 118344777
chr1 108593976 108593982 TBP TRANSFAC yes 31380055
chr1 108593976 108593982 TBP TRANSFAC yes 118344778
chr1 108593993 108593997 YY1 TRANSFAC yes 31380056
chr1 108593993 108593997 YY1 TRANSFAC yes 118344779
chr1 108594001 108594012 RUNX1 JASPAR yes 31380057
chr1 108594001 108594012 RUNX1 JASPAR yes 118344780
chr1 108594023 108594038 FOXA1 JASPAR yes 31380058
chr1 108594023 108594038 FOXA1 JASPAR yes 118344781
chr1 108594024 108594039 FOXP1 JASPAR yes 31380059
chr1 108594024 108594039 FOXP1 JASPAR yes 118344782
chr1 108594025 108594036 FOXP2 JASPAR yes 31380060
chr1 108594025 108594036 FOXP2 JASPAR yes 118344783
chr1 108594025 108594037 FOXC2 JASPAR yes 31380061
chr1 108594025 108594037 FOXC2 JASPAR yes 118344784
chr1 108594025 108594039 FOXF2 JASPAR yes 31380062
chr1 108594025 108594039 FOXF2 JASPAR yes 118344785
chr1 108594026 108594034 FOXG1 JASPAR yes 31380063
chr1 108594026 108594034 FOXG1 JASPAR yes 118344786
chr1 108594027 108594038 FOXA1 JASPAR yes 31380064
chr1 108594027 108594038 FOXH1 JASPAR yes 31380065
chr1 108594027 108594038 FOXA1 JASPAR yes 118344787
chr1 108594027 108594038 FOXH1 JASPAR yes 118344788
chr1 108594065 108594079 JUN JASPAR yes 31380066
chr1 108594065 108594079 JUN JASPAR yes 118344789
chr1 108594069 108594080 FOS JASPAR yes 31380067
chr1 108594069 108594080 FOSL1 JASPAR yes 31380068
chr1 108594069 108594080 NFE2 JASPAR yes 31380069
chr1 108594069 108594080 FOS JASPAR yes 118344790
chr1 108594069 108594080 FOSL1 JASPAR yes 118344791
chr1 108594069 108594080 NFE2 JASPAR yes 118344792
chr1 108594071 108594077 JUN TRANSFAC yes 31380070
chr1 108594071 108594077 JUN TRANSFAC yes 118344793
chr1 108594071 108594089 NFYA JASPAR yes 31380071
chr1 108594071 108594089 NFYA JASPAR yes 118344794
chr1 108594074 108594090 NFYA JASPAR yes 31380072
chr1 108594074 108594090 NFYA JASPAR yes 118344795
chr1 108594077 108594092 NFYB JASPAR yes 31380073
chr1 108594077 108594092 NFYB JASPAR yes 118344796
chr1 108594079 108594084 NFY TRANSFAC yes 31380074
chr1 108594079 108594084 NFY TRANSFAC yes 118344797
chr1 108594084 108594098 IRF7 JASPAR yes 31380075
chr1 108594084 108594098 IRF8 JASPAR yes 31380076
chr1 108594084 108594098 IRF7 JASPAR yes 118344798
chr1 108594084 108594098 IRF8 JASPAR yes 118344799
chr1 108594089 108594094 MYB TRANSFAC yes 31380077
chr1 108594089 108594094 MYB TRANSFAC yes 118344800
chr1 108594106 108594120 TCF7L2 JASPAR yes 31380078
chr1 108594106 108594120 TCF7L2 JASPAR yes 118344801
chr1 108594106 108594121 LEF1 JASPAR yes 31380079
chr1 108594106 108594121 LEF1 JASPAR yes 118344802
chr1 108594111 108594117 SOX10 JASPAR yes 31380080
chr1 108594111 108594117 SOX10 JASPAR yes 118344803
chr1 108594114 108594119 ETS2 TRANSFAC yes 31380081
chr1 108594114 108594119 ETS2 TRANSFAC yes 118344804
chr1 108594169 108594184 RUNX2 JASPAR yes 31380082
chr1 108594169 108594184 RUNX2 JASPAR yes 118344805
SNP sites on vista2805[chr1:108593971-108594173]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108593977 rs34014816 T TA,TAA,TAAA
FOXP1 IRF1 TBP
541129
chr1 108593977 rs55642932 T TA,TAA
FOXP1 IRF1 TBP
541130
chr1 108593977 rs5776917 T TA
FOXP1 IRF1 TBP
541131
chr1 108594019 rs17020768 G C,T no 541132
Genes possibly regulated by vista2805[chr1:108593971-108594173]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108113782 108507766 - VAV3 ENSG00000134215.11 108507766 0.95 0.93 954 13795
Expression level of Genes
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miRNAs possibly regulated by vista2805[chr1:108593971-108594173]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results