EnhancerDB
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  3. vista28054[chr18:77384640-77384762]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28054[chr18:77384640-77384762]
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Tissue distribution of vista28054
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Transcription factor that possibly regulate vista28054[chr18:77384640-77384762]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77384637 77384643 SOX10 JASPAR yes 42736869
chr18 77384637 77384643 SOX10 JASPAR yes 111830339
chr18 77384638 77384648 RUNX3 JASPAR yes 42736870
chr18 77384638 77384648 RUNX3 JASPAR yes 111830340
chr18 77384674 77384689 AR JASPAR yes 42736871
chr18 77384674 77384689 AR JASPAR yes 111830341
chr18 77384696 77384706 MAX JASPAR yes 42736872
chr18 77384696 77384706 MAX JASPAR yes 111830342
chr18 77384696 77384707 USF1 JASPAR yes 42736873
chr18 77384696 77384707 USF2 JASPAR yes 42736874
chr18 77384696 77384707 USF1 JASPAR yes 111830343
chr18 77384696 77384707 USF2 JASPAR yes 111830344
chr18 77384697 77384707 CLOCK JASPAR yes 42736875
chr18 77384697 77384707 FIGLA JASPAR yes 42736876
chr18 77384697 77384707 MAX JASPAR yes 42736877
chr18 77384697 77384707 MLX JASPAR yes 42736878
chr18 77384697 77384707 MNT JASPAR yes 42736879
chr18 77384697 77384707 CLOCK JASPAR yes 111830345
chr18 77384697 77384707 FIGLA JASPAR yes 111830346
chr18 77384697 77384707 MAX JASPAR yes 111830347
chr18 77384697 77384707 MLX JASPAR yes 111830348
chr18 77384697 77384707 MNT JASPAR yes 111830349
chr18 77384697 77384708 USF2 JASPAR yes 42736880
chr18 77384697 77384708 USF2 JASPAR yes 111830350
chr18 77384698 77384705 USF1 JASPAR yes 42736881
chr18 77384698 77384705 USF1 JASPAR yes 111830351
chr18 77384698 77384708 MAX JASPAR yes 42736882
chr18 77384698 77384708 MAX JASPAR yes 111830352
chr18 77384699 77384704 MYC TRANSFAC yes 42736883
chr18 77384699 77384704 USF1 TRANSFAC yes 42736884
chr18 77384699 77384704 USF2 TRANSFAC yes 42736885
chr18 77384699 77384704 MYC TRANSFAC yes 111830353
chr18 77384699 77384704 USF1 TRANSFAC yes 111830354
chr18 77384699 77384704 USF2 TRANSFAC yes 111830355
chr18 77384699 77384706 USF1 JASPAR yes 42736886
chr18 77384699 77384706 USF1 JASPAR yes 111830356
chr18 77384705 77384720 JUND JASPAR yes 42736887
chr18 77384705 77384720 JUND JASPAR yes 111830357
chr18 77384707 77384721 ATF7 JASPAR yes 42736888
chr18 77384707 77384721 BATF3 JASPAR yes 42736889
chr18 77384707 77384721 ATF7 JASPAR yes 111830358
chr18 77384707 77384721 BATF3 JASPAR yes 111830359
chr18 77384708 77384720 JDP2 JASPAR yes 42736890
chr18 77384708 77384720 JDP2 JASPAR yes 111830360
chr18 77384708 77384723 JUND JASPAR yes 42736891
chr18 77384708 77384723 JUND JASPAR yes 111830361
chr18 77384709 77384722 JUN JASPAR yes 42736892
chr18 77384709 77384722 JUN JASPAR yes 111830362
chr18 77384710 77384717 JUN TRANSFAC yes 42736893
chr18 77384710 77384717 JUN TRANSFAC yes 111830363
chr18 77384727 77384733 ESR1 TRANSFAC yes 42736894
chr18 77384727 77384733 ESR1 TRANSFAC yes 111830364
chr18 77384729 77384733 ESR1 TRANSFAC yes 42736895
chr18 77384729 77384733 ESR1 TRANSFAC yes 111830365
SNP sites on vista28054[chr18:77384640-77384762]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77384650 rs117351533 A G no 5359851
chr18 77384731 rs552132139 G A
ESR1
5359852
Genes possibly regulated by vista28054[chr18:77384640-77384762]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77439801 77514510 + CTDP1 ENSG00000060069.12 77439801 0.6 1.0 16686 44961
Expression level of Genes
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miRNAs possibly regulated by vista28054[chr18:77384640-77384762]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results