EnhancerDB
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  3. vista28061[chr18:77552344-77552827]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28061[chr18:77552344-77552827]
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Tissue distribution of vista28061
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Transcription factor that possibly regulate vista28061[chr18:77552344-77552827]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77552335 77552345 MEOX2 JASPAR yes 42737149
chr18 77552335 77552345 MEOX2 JASPAR yes 111834884
chr18 77552361 77552371 ID4 JASPAR yes 42737150
chr18 77552361 77552371 ID4 JASPAR yes 111834885
chr18 77552374 77552389 AR JASPAR yes 42737151
chr18 77552374 77552389 AR JASPAR yes 111834886
chr18 77552406 77552414 MEIS2 JASPAR yes 42737152
chr18 77552406 77552414 MEIS3 JASPAR yes 42737153
chr18 77552406 77552414 MEIS2 JASPAR yes 111834887
chr18 77552406 77552414 MEIS3 JASPAR yes 111834888
chr18 77552407 77552411 NFE TRANSFAC yes 42737154
chr18 77552407 77552411 NFE TRANSFAC yes 111834889
chr18 77552407 77552414 MEIS1 JASPAR yes 42737155
chr18 77552407 77552414 MEIS1 JASPAR yes 111834890
chr18 77552432 77552453 REST JASPAR yes 42737156
chr18 77552432 77552453 REST JASPAR yes 111834891
chr18 77552441 77552454 NFKB2 JASPAR yes 42737157
chr18 77552441 77552454 NFKB2 JASPAR yes 111834892
chr18 77552443 77552447 LFA1 TRANSFAC yes 42737158
chr18 77552443 77552447 LFA1 TRANSFAC yes 111834893
chr18 77552454 77552465 EBF1 JASPAR yes 42737159
chr18 77552454 77552465 EBF1 JASPAR yes 111834894
chr18 77552470 77552485 TFAP2A JASPAR yes 42737160
chr18 77552470 77552485 TFAP2A JASPAR yes 111834895
chr18 77552472 77552487 TFAP2C JASPAR yes 42737161
chr18 77552472 77552487 TFAP2C JASPAR yes 111834896
chr18 77552473 77552485 INSM1 JASPAR yes 42737162
chr18 77552473 77552485 TFAP2A JASPAR yes 42737163
chr18 77552473 77552485 TFAP2B JASPAR yes 42737164
chr18 77552473 77552485 TFAP2C JASPAR yes 42737165
chr18 77552473 77552485 INSM1 JASPAR yes 111834897
chr18 77552473 77552485 TFAP2A JASPAR yes 111834898
chr18 77552473 77552485 TFAP2B JASPAR yes 111834899
chr18 77552473 77552485 TFAP2C JASPAR yes 111834900
chr18 77552475 77552486 GCM1 JASPAR yes 42737166
chr18 77552475 77552486 GCM1 JASPAR yes 111834901
chr18 77552477 77552486 THAP1 JASPAR yes 42737167
chr18 77552477 77552486 THAP1 JASPAR yes 111834902
chr18 77552479 77552498 CTCF JASPAR yes 42737168
chr18 77552479 77552498 CTCF JASPAR yes 111834903
chr18 77552480 77552484 LFA1 TRANSFAC yes 42737169
chr18 77552480 77552484 LFA1 TRANSFAC yes 111834904
chr18 77552481 77552491 ID4 JASPAR yes 42737170
chr18 77552481 77552491 TCF4 JASPAR yes 42737171
chr18 77552481 77552491 ID4 JASPAR yes 111834905
chr18 77552481 77552491 TCF4 JASPAR yes 111834906
chr18 77552483 77552488 USF2 TRANSFAC yes 42737172
chr18 77552483 77552488 USF2 TRANSFAC yes 111834907
chr18 77552516 77552520 TEAD2 TRANSFAC yes 42737173
chr18 77552516 77552520 TEAD2 TRANSFAC yes 111834908
chr18 77552516 77552521 TBP TRANSFAC yes 42737174
chr18 77552516 77552521 TBP TRANSFAC yes 111834909
chr18 77552568 77552580 NHLH1 JASPAR yes 42737175
chr18 77552568 77552580 NHLH1 JASPAR yes 111834910
chr18 77552569 77552579 NHLH1 JASPAR yes 42737176
chr18 77552569 77552579 NHLH1 JASPAR yes 111834911
chr18 77552576 77552590 PLAG1 JASPAR yes 42737177
chr18 77552576 77552590 PLAG1 JASPAR yes 111834912
chr18 77552586 77552606 TP63 JASPAR yes 42737178
chr18 77552586 77552606 TP63 JASPAR yes 111834913
chr18 77552587 77552605 TP53 JASPAR yes 42737179
chr18 77552587 77552605 TP73 JASPAR yes 42737180
chr18 77552587 77552605 TP53 JASPAR yes 111834914
chr18 77552587 77552605 TP73 JASPAR yes 111834915
chr18 77552593 77552599 SP1 TRANSFAC yes 42737181
chr18 77552593 77552599 SP1 TRANSFAC yes 111834916
chr18 77552629 77552640 E2F6 JASPAR yes 42737182
chr18 77552629 77552640 E2F6 JASPAR yes 111834917
chr18 77552662 77552666 NFE TRANSFAC yes 42737183
chr18 77552662 77552666 NFE TRANSFAC yes 111834918
chr18 77552674 77552695 IRF1 JASPAR yes 42737184
chr18 77552674 77552695 IRF1 JASPAR yes 111834919
chr18 77552677 77552691 IRF7 JASPAR yes 42737185
chr18 77552677 77552691 IRF8 JASPAR yes 42737186
chr18 77552677 77552691 IRF7 JASPAR yes 111834920
chr18 77552677 77552691 IRF8 JASPAR yes 111834921
chr18 77552682 77552703 IRF1 JASPAR yes 42737187
chr18 77552682 77552703 IRF1 JASPAR yes 111834922
chr18 77552686 77552700 SPI1 JASPAR yes 42737188
chr18 77552686 77552700 SPIC JASPAR yes 42737189
chr18 77552686 77552700 SPI1 JASPAR yes 111834923
chr18 77552686 77552700 SPIC JASPAR yes 111834924
chr18 77552687 77552700 ELF1 JASPAR yes 42737190
chr18 77552687 77552700 ELF1 JASPAR yes 111834925
chr18 77552690 77552700 GABPA JASPAR yes 42737191
chr18 77552690 77552700 GABPA JASPAR yes 111834926
chr18 77552691 77552696 ETS2 TRANSFAC yes 42737192
chr18 77552691 77552696 ETS2 TRANSFAC yes 111834927
chr18 77552700 77552713 SMAD2 JASPAR yes 42737193
chr18 77552700 77552713 SMAD2 JASPAR yes 111834928
chr18 77552710 77552723 ZBTB18 JASPAR yes 42737194
chr18 77552710 77552723 ZBTB18 JASPAR yes 111834929
chr18 77552712 77552722 NEUROG2 JASPAR yes 42737195
chr18 77552712 77552722 NEUROG2 JASPAR yes 111834930
chr18 77552712 77552724 TAL1 JASPAR yes 42737196
chr18 77552712 77552724 TAL1 JASPAR yes 111834931
chr18 77552766 77552771 ATF1 TRANSFAC yes 42737197
chr18 77552766 77552771 ATF1 TRANSFAC yes 111834932
chr18 77552812 77552816 H4TF2 TRANSFAC yes 42737198
chr18 77552812 77552816 H4TF2 TRANSFAC yes 111834933
chr18 77552819 77552838 REST JASPAR yes 42737199
chr18 77552819 77552838 REST JASPAR yes 111834934
SNP sites on vista28061[chr18:77552344-77552827]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77552419 rs116970045 G A no 5360621
chr18 77552441 rs182303100 C T
NFKB2 REST
5360622
chr18 77552526 rs538521429 G A no 5360623
chr18 77552527 rs117534629 G A no 5360624
chr18 77552535 rs575097807 A C no 5360625
chr18 77552696 rs521708 A G
ELF1 ETS2 GABPA IRF1 SPI1 SPIC
5360626
chr18 77552709 rs187963725 G A
SMAD2
5360627
chr18 77552735 rs530007203 C T no 5360628
chr18 77552760 rs114761418 C T no 5360629
chr18 77552761 rs527372324 G A,C no 5360630
chr18 77552762 rs376763235 G C no 5360631
chr18 77552774 rs116649835 C G no 5360632
chr18 77552790 rs114041538 G A no 5360633
Genes possibly regulated by vista28061[chr18:77552344-77552827]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77623668 77660184 + KCNG2 ENSG00000178342.4 77623668 0.79 1.0 16687 29159
Expression level of Genes
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miRNAs possibly regulated by vista28061[chr18:77552344-77552827]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results