EnhancerDB
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  3. vista28066[chr18:77616666-77616803]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28066[chr18:77616666-77616803]
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Tissue distribution of vista28066
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Transcription factor that possibly regulate vista28066[chr18:77616666-77616803]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77616688 77616693 SP1 TRANSFAC yes 42737295
chr18 77616688 77616693 SP1 TRANSFAC yes 111837683
chr18 77616692 77616705 SMAD2 JASPAR yes 42737296
chr18 77616692 77616705 SMAD2 JASPAR yes 111837684
chr18 77616696 77616710 CREB3 JASPAR yes 42737297
chr18 77616696 77616710 CREB3 JASPAR yes 111837685
chr18 77616706 77616712 SOX10 JASPAR yes 42737298
chr18 77616706 77616712 SOX10 JASPAR yes 111837686
chr18 77616717 77616729 NHLH1 JASPAR yes 42737299
chr18 77616717 77616729 NHLH1 JASPAR yes 111837687
chr18 77616718 77616728 NHLH1 JASPAR yes 42737300
chr18 77616718 77616728 NHLH1 JASPAR yes 111837688
chr18 77616758 77616768 MSC JASPAR yes 42737301
chr18 77616758 77616768 MYF6 JASPAR yes 42737302
chr18 77616758 77616768 NHLH1 JASPAR yes 42737303
chr18 77616758 77616768 MSC JASPAR yes 111837689
chr18 77616758 77616768 MYF6 JASPAR yes 111837690
chr18 77616758 77616768 NHLH1 JASPAR yes 111837691
chr18 77616774 77616783 THAP1 JASPAR yes 42737304
chr18 77616774 77616783 THAP1 JASPAR yes 111837692
chr18 77616777 77616781 LFA1 TRANSFAC yes 42737305
chr18 77616777 77616781 LFA1 TRANSFAC yes 111837693
chr18 77616777 77616796 RFX2 JASPAR yes 42737306
chr18 77616777 77616796 RFX2 JASPAR yes 111837694
SNP sites on vista28066[chr18:77616666-77616803]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77616704 rs543897969 G A
CREB3 SMAD2
5360957
Genes possibly regulated by vista28066[chr18:77616666-77616803]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77623668 77660184 + KCNG2 ENSG00000178342.4 77623668 0.79 1.0 16687 93135
chr18 77662420 77711664 - PQLC1 ENSG00000122490.14 77711664 0.78 1.0 16688 5139
Expression level of Genes
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miRNAs possibly regulated by vista28066[chr18:77616666-77616803]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results