EnhancerDB
  1. Home
  2. Enhancers
  3. vista28068[chr18:77713083-77713430]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28068[chr18:77713083-77713430]
Back to top
Tissue distribution of vista28068
Back to top
Transcription factor that possibly regulate vista28068[chr18:77713083-77713430]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77713090 77713105 ZIC3 JASPAR yes 42737345
chr18 77713090 77713105 ZIC4 JASPAR yes 42737346
chr18 77713091 77713105 ZIC1 JASPAR yes 42737347
chr18 77713092 77713105 ELF1 JASPAR yes 42737348
chr18 77713116 77713128 NHLH1 JASPAR yes 42737349
chr18 77713117 77713127 NHLH1 JASPAR yes 42737350
chr18 77713122 77713128 NFE2 TRANSFAC yes 42737351
chr18 77713130 77713142 NHLH1 JASPAR yes 42737352
chr18 77713166 77713174 RHOXF1 JASPAR yes 42737353
chr18 77713174 77713178 NFE TRANSFAC yes 42737354
chr18 77713177 77713192 NR2C2 JASPAR yes 42737355
chr18 77713184 77713199 TFAP2A JASPAR yes 42737356
chr18 77713184 77713199 TFAP2C JASPAR yes 42737357
chr18 77713212 77713226 PLAG1 JASPAR yes 42737358
chr18 77713239 77713243 H4TF2 TRANSFAC yes 42737359
chr18 77713250 77713254 NFE TRANSFAC yes 42737360
chr18 77713251 77713256 GATA2 JASPAR yes 42737361
chr18 77713291 77713295 LFA1 TRANSFAC yes 42737362
chr18 77713300 77713309 THAP1 JASPAR yes 42737363
chr18 77713300 77713311 GCM1 JASPAR yes 42737364
chr18 77713301 77713313 TFAP2A JASPAR yes 42737365
chr18 77713305 77713320 TFAP2A JASPAR yes 42737366
chr18 77713307 77713322 TFAP2C JASPAR yes 42737367
chr18 77713308 77713319 TFAP2A JASPAR yes 42737368
chr18 77713308 77713319 TFAP2B JASPAR yes 42737369
chr18 77713308 77713319 TFAP2C JASPAR yes 42737370
chr18 77713309 77713318 TFAP2A JASPAR yes 42737371
chr18 77713313 77713318 SP1 TRANSFAC yes 42737372
chr18 77713338 77713343 SP1 TRANSFAC yes 42737373
chr18 77713384 77713396 CREB1 JASPAR yes 42737374
chr18 77713385 77713390 ATF1 TRANSFAC yes 42737375
chr18 77713387 77713397 SREBF1 JASPAR yes 42737376
chr18 77713387 77713397 SREBF2 JASPAR yes 42737377
chr18 77713389 77713404 RUNX2 JASPAR yes 42737378
chr18 77713405 77713418 TFAP2B JASPAR yes 42737379
chr18 77713405 77713418 TFAP2C JASPAR yes 42737380
SNP sites on vista28068[chr18:77713083-77713430]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77713260 rs8083008 G C no 5361415
chr18 77713289 rs8084593 A G no 5361416
chr18 77713328 rs113336268 C T no 5361417
chr18 77713378 rs35167189 A G no 5361418
Genes possibly regulated by vista28068[chr18:77713083-77713430]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77623668 77660184 + KCNG2 ENSG00000178342.4 77623668 0.79 1.0 16687 10585
chr18 77662420 77711664 - PQLC1 ENSG00000122490.14 77711664 0.78 1.0 16688 98581
chr18 77724561 77730822 + HSBP1L1 ENSG00000226742.3 77724561 0.69 1.0 16689 88869
chr18 77732867 77793949 - TXNL4A ENSG00000141759.10 77793949 0.87 0.99 16690 19481
chr18 77794346 77854968 + RP11-795F19.5 ENSG00000267127.2 77794346 0.91 0.94 16691 19084
chr18 77794358 77806397 + RBFA ENSG00000101546.8 77794358 0.6 0.99 16692 19072
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28068[chr18:77713083-77713430]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results