EnhancerDB
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  3. vista28069[chr18:77715299-77715635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28069[chr18:77715299-77715635]
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Tissue distribution of vista28069
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Transcription factor that possibly regulate vista28069[chr18:77715299-77715635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77715301 77715306 ETS2 TRANSFAC yes 42737381
chr18 77715317 77715331 POU1F1 JASPAR yes 42737382
chr18 77715326 77715337 FOXA1 JASPAR yes 42737383
chr18 77715326 77715341 FOXA1 JASPAR yes 42737384
chr18 77715327 77715338 FOXB1 JASPAR yes 42737385
chr18 77715327 77715338 FOXC1 JASPAR yes 42737386
chr18 77715327 77715339 FOXC2 JASPAR yes 42737387
chr18 77715328 77715343 IRF9 JASPAR yes 42737388
chr18 77715337 77715350 HSF1 JASPAR yes 42737389
chr18 77715343 77715358 IRF9 JASPAR yes 42737390
chr18 77715344 77715358 IRF7 JASPAR yes 42737391
chr18 77715373 77715388 FOXP1 JASPAR yes 42737392
chr18 77715374 77715389 FOXP1 JASPAR yes 42737393
chr18 77715375 77715390 FOXP1 JASPAR yes 42737394
chr18 77715393 77715407 RORA JASPAR yes 42737395
chr18 77715412 77715426 E2F7 JASPAR yes 42737396
chr18 77715414 77715420 MZF1 JASPAR yes 42737397
chr18 77715438 77715442 TEAD2 TRANSFAC yes 42737398
chr18 77715454 77715464 SP1 JASPAR yes 42737399
chr18 77715457 77715462 SP1 TRANSFAC yes 42737400
chr18 77715463 77715478 ZIC3 JASPAR yes 42737401
chr18 77715463 77715478 ZIC4 JASPAR yes 42737402
chr18 77715464 77715478 GLIS2 JASPAR yes 42737403
chr18 77715464 77715478 GLIS3 JASPAR yes 42737404
chr18 77715465 77715471 NFIC JASPAR yes 42737405
chr18 77715466 77715478 INSM1 JASPAR yes 42737406
chr18 77715466 77715486 RREB1 JASPAR yes 42737407
chr18 77715473 77715485 FOXI1 JASPAR yes 42737408
chr18 77715483 77715495 INSM1 JASPAR yes 42737409
chr18 77715488 77715495 SP1 TRANSFAC yes 42737410
chr18 77715490 77715495 SP1 TRANSFAC yes 42737411
chr18 77715491 77715496 SP1 TRANSFAC yes 42737412
chr18 77715510 77715521 CEBPB JASPAR yes 42737413
chr18 77715511 77715522 CEBPA JASPAR yes 42737414
chr18 77715530 77715548 MAFF JASPAR yes 42737415
chr18 77715532 77715553 MAFG JASPAR yes 42737416
chr18 77715535 77715546 BATF JASPAR yes 42737417
chr18 77715536 77715547 FOSL2 JASPAR yes 42737418
chr18 77715536 77715547 JUNB JASPAR yes 42737419
chr18 77715537 77715548 FOS JASPAR yes 42737420
chr18 77715537 77715548 FOSL1 JASPAR yes 42737421
chr18 77715539 77715545 JUN TRANSFAC yes 42737422
chr18 77715569 77715590 IRF1 JASPAR yes 42737423
chr18 77715570 77715585 MEF2C JASPAR yes 42737424
chr18 77715570 77715591 IRF1 JASPAR yes 42737425
chr18 77715571 77715586 STAT2 JASPAR yes 42737426
chr18 77715574 77715586 IRF1 JASPAR yes 42737427
chr18 77715574 77715588 IRF7 JASPAR yes 42737428
chr18 77715575 77715595 RREB1 JASPAR yes 42737429
chr18 77715575 77715596 IRF1 JASPAR yes 42737430
chr18 77715576 77715582 TCF4 TRANSFAC yes 42737431
chr18 77715576 77715591 FOXP1 JASPAR yes 42737432
chr18 77715576 77715597 IRF1 JASPAR yes 42737433
chr18 77715577 77715592 STAT2 JASPAR yes 42737434
chr18 77715580 77715592 IRF1 JASPAR yes 42737435
chr18 77715580 77715594 IRF7 JASPAR yes 42737436
chr18 77715581 77715602 IRF1 JASPAR yes 42737437
chr18 77715582 77715588 TCF4 TRANSFAC yes 42737438
chr18 77715582 77715597 FOXP1 JASPAR yes 42737439
chr18 77715586 77715598 IRF1 JASPAR yes 42737440
chr18 77715588 77715594 TCF4 TRANSFAC yes 42737441
SNP sites on vista28069[chr18:77715299-77715635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77715473 rs557012504 G A
FOXI1 GLIS2 GLIS3 INSM1 RREB1 ZIC3 ZIC4
5361426
chr18 77715495 rs58178604 G A
INSM1 SP1
5361427
chr18 77715601 rs371342363 A G
IRF1
5361428
Genes possibly regulated by vista28069[chr18:77715299-77715635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77623668 77660184 + KCNG2 ENSG00000178342.4 77623668 0.79 1.0 16687 8369
chr18 77662420 77711664 - PQLC1 ENSG00000122490.14 77711664 0.78 1.0 16688 96365
chr18 77724561 77730822 + HSBP1L1 ENSG00000226742.3 77724561 0.69 1.0 16689 91074
chr18 77732867 77793949 - TXNL4A ENSG00000141759.10 77793949 0.87 0.99 16690 21686
chr18 77794346 77854968 + RP11-795F19.5 ENSG00000267127.2 77794346 0.91 0.94 16691 21289
chr18 77794358 77806397 + RBFA ENSG00000101546.8 77794358 0.6 0.99 16692 21277
Expression level of Genes
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miRNAs possibly regulated by vista28069[chr18:77715299-77715635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results