EnhancerDB
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  3. vista28072[chr18:77936891-77937280]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28072[chr18:77936891-77937280]
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Tissue distribution of vista28072
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Transcription factor that possibly regulate vista28072[chr18:77936891-77937280]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 77936890 77936911 REST JASPAR yes 42737589
chr18 77936890 77936911 REST JASPAR yes 111846281
chr18 77936891 77936894 MYB TRANSFAC yes 42737590
chr18 77936891 77936894 MYB TRANSFAC yes 111846282
chr18 77936904 77936918 STAT1 JASPAR yes 42737591
chr18 77936904 77936918 STAT1 JASPAR yes 111846283
chr18 77936912 77936916 YY1 TRANSFAC yes 42737592
chr18 77936912 77936916 YY1 TRANSFAC yes 111846284
chr18 77936921 77936925 YY1 TRANSFAC yes 42737593
chr18 77936921 77936925 YY1 TRANSFAC yes 111846285
chr18 77936926 77936932 ETS1 JASPAR yes 42737594
chr18 77936926 77936932 ETS1 JASPAR yes 111846286
chr18 77936951 77936959 MEIS3 JASPAR yes 42737595
chr18 77936951 77936959 MEIS3 JASPAR yes 111846287
chr18 77936952 77936956 NFE TRANSFAC yes 42737596
chr18 77936952 77936956 NFE TRANSFAC yes 111846288
chr18 77936957 77936963 SOX10 JASPAR yes 42737597
chr18 77936957 77936963 SOX10 JASPAR yes 111846289
chr18 77936962 77936969 E2F1 TRANSFAC yes 42737598
chr18 77936962 77936969 E2F1 TRANSFAC yes 111846290
chr18 77936970 77936980 RELA JASPAR yes 42737599
chr18 77936970 77936980 RELA JASPAR yes 111846291
chr18 77936979 77936985 NFE2 TRANSFAC yes 42737600
chr18 77936979 77936985 NFE2 TRANSFAC yes 111846292
chr18 77936986 77937002 GLIS1 JASPAR yes 42737601
chr18 77936986 77937002 GLIS1 JASPAR yes 111846293
chr18 77937001 77937013 NHLH1 JASPAR yes 42737602
chr18 77937001 77937013 NHLH1 JASPAR yes 111846294
chr18 77937002 77937012 MSC JASPAR yes 42737603
chr18 77937002 77937012 TFAP4 JASPAR yes 42737604
chr18 77937002 77937012 MSC JASPAR yes 111846295
chr18 77937002 77937012 TFAP4 JASPAR yes 111846296
chr18 77937017 77937036 REST JASPAR yes 42737605
chr18 77937017 77937036 REST JASPAR yes 111846297
chr18 77937032 77937041 HIC2 JASPAR yes 42737606
chr18 77937032 77937041 HIC2 JASPAR yes 111846298
chr18 77937046 77937056 MAX JASPAR yes 42737607
chr18 77937046 77937056 MAX JASPAR yes 111846299
chr18 77937047 77937057 MAX JASPAR yes 42737608
chr18 77937047 77937057 MNT JASPAR yes 42737609
chr18 77937047 77937057 MAX JASPAR yes 111846300
chr18 77937047 77937057 MNT JASPAR yes 111846301
chr18 77937048 77937055 USF1 JASPAR yes 42737610
chr18 77937048 77937055 USF1 JASPAR yes 111846302
chr18 77937048 77937058 MAX JASPAR yes 42737611
chr18 77937048 77937058 MAX JASPAR yes 111846303
chr18 77937049 77937054 MYC TRANSFAC yes 42737612
chr18 77937049 77937054 USF1 TRANSFAC yes 42737613
chr18 77937049 77937054 USF2 TRANSFAC yes 42737614
chr18 77937049 77937054 MYC TRANSFAC yes 111846304
chr18 77937049 77937054 USF1 TRANSFAC yes 111846305
chr18 77937049 77937054 USF2 TRANSFAC yes 111846306
chr18 77937049 77937056 USF1 JASPAR yes 42737615
chr18 77937049 77937056 USF1 JASPAR yes 111846307
chr18 77937075 77937085 GABPA JASPAR yes 42737616
chr18 77937075 77937085 GABPA JASPAR yes 111846308
chr18 77937075 77937086 FLI1 JASPAR yes 42737617
chr18 77937075 77937086 FLI1 JASPAR yes 111846309
chr18 77937076 77937084 EHF JASPAR yes 42737618
chr18 77937076 77937084 EHF JASPAR yes 111846310
chr18 77937080 77937095 TFAP2A JASPAR yes 42737619
chr18 77937080 77937095 TFAP2C JASPAR yes 42737620
chr18 77937080 77937095 TFAP2A JASPAR yes 111846311
chr18 77937080 77937095 TFAP2C JASPAR yes 111846312
chr18 77937082 77937097 TFAP2A JASPAR yes 42737621
chr18 77937082 77937097 TFAP2C JASPAR yes 42737622
chr18 77937082 77937097 TFAP2A JASPAR yes 111846313
chr18 77937082 77937097 TFAP2C JASPAR yes 111846314
chr18 77937083 77937094 TFAP2A JASPAR yes 42737623
chr18 77937083 77937094 TFAP2B JASPAR yes 42737624
chr18 77937083 77937094 TFAP2A JASPAR yes 111846315
chr18 77937083 77937094 TFAP2B JASPAR yes 111846316
chr18 77937101 77937122 IRF1 JASPAR yes 42737625
chr18 77937101 77937122 IRF1 JASPAR yes 111846317
chr18 77937104 77937108 YY1 TRANSFAC yes 42737626
chr18 77937104 77937108 YY1 TRANSFAC yes 111846318
chr18 77937104 77937119 FOXP1 JASPAR yes 42737627
chr18 77937104 77937119 FOXP1 JASPAR yes 111846319
chr18 77937105 77937120 FOXP1 JASPAR yes 42737628
chr18 77937105 77937120 FOXP1 JASPAR yes 111846320
chr18 77937106 77937121 FOXP1 JASPAR yes 42737629
chr18 77937106 77937121 FOXP1 JASPAR yes 111846321
chr18 77937107 77937122 FOXP1 JASPAR yes 42737630
chr18 77937107 77937122 FOXP1 JASPAR yes 111846322
chr18 77937107 77937128 IRF1 JASPAR yes 42737631
chr18 77937107 77937128 IRF1 JASPAR yes 111846323
chr18 77937108 77937123 FOXP1 JASPAR yes 42737632
chr18 77937108 77937123 FOXP1 JASPAR yes 111846324
chr18 77937109 77937124 FOXP1 JASPAR yes 42737633
chr18 77937109 77937124 FOXP1 JASPAR yes 111846325
chr18 77937142 77937147 ETS2 TRANSFAC yes 42737634
chr18 77937142 77937147 ETS2 TRANSFAC yes 111846326
chr18 77937147 77937160 NFKB1 JASPAR yes 42737635
chr18 77937147 77937160 NFKB2 JASPAR yes 42737636
chr18 77937147 77937160 NFKB1 JASPAR yes 111846327
chr18 77937147 77937160 NFKB2 JASPAR yes 111846328
chr18 77937148 77937158 REL JASPAR yes 42737637
chr18 77937148 77937158 REL JASPAR yes 111846329
chr18 77937174 77937183 ZEB1 JASPAR yes 42737638
chr18 77937174 77937183 ZEB1 JASPAR yes 111846330
chr18 77937189 77937201 PROX1 JASPAR yes 42737639
chr18 77937189 77937201 PROX1 JASPAR yes 111846331
chr18 77937221 77937236 JUND JASPAR yes 42737640
chr18 77937221 77937236 JUND JASPAR yes 111846332
chr18 77937222 77937235 JUN JASPAR yes 42737641
chr18 77937222 77937235 JUN JASPAR yes 111846333
chr18 77937224 77937239 JUND JASPAR yes 42737642
chr18 77937224 77937239 JUND JASPAR yes 111846334
chr18 77937225 77937238 JUN JASPAR yes 42737643
chr18 77937225 77937238 JUN JASPAR yes 111846335
chr18 77937226 77937233 JUN TRANSFAC yes 42737644
chr18 77937226 77937233 JUN TRANSFAC yes 111846336
chr18 77937234 77937245 EBF1 JASPAR yes 42737645
chr18 77937234 77937245 EBF1 JASPAR yes 111846337
chr18 77937241 77937256 ESR2 JASPAR yes 42737646
chr18 77937241 77937256 ESR2 JASPAR yes 111846338
chr18 77937241 77937261 ESR1 JASPAR yes 42737647
chr18 77937241 77937261 ESR1 JASPAR yes 111846339
chr18 77937248 77937259 USF2 JASPAR yes 42737648
chr18 77937248 77937259 USF2 JASPAR yes 111846340
chr18 77937277 77937288 E2F4 JASPAR yes 42737649
chr18 77937277 77937288 E2F6 JASPAR yes 42737650
chr18 77937277 77937288 E2F4 JASPAR yes 111846341
chr18 77937277 77937288 E2F6 JASPAR yes 111846342
chr18 77937278 77937289 E2F1 JASPAR yes 42737651
chr18 77937278 77937289 E2F1 JASPAR yes 111846343
SNP sites on vista28072[chr18:77936891-77937280]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 77936931 rs116083987 C A,T
ETS1
5362133
chr18 77936940 rs112497166 G A no 5362134
chr18 77937000 rs371300799 C T
GLIS1
5362135
chr18 77937052 rs571494341 C T
MAX MNT MYC USF1 USF2
5362136
chr18 77937058 rs538816302 G A
MAX
5362137
chr18 77937060 rs73492480 G A no 5362138
chr18 77937080 rs569165385 G T
EHF FLI1 GABPA TFAP2A TFAP2C
5362139
chr18 77937128 rs536285207 T C
IRF1
5362140
chr18 77937186 rs534018957 C T no 5362141
chr18 77937222 rs191240253 G C
JUN JUND
5362142
chr18 77937261 rs11665580 T C
ESR1
5362143
Genes possibly regulated by vista28072[chr18:77936891-77937280]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 77866915 77905406 + ADNP2 ENSG00000101544.4 77866915 0.64 1.0 16693 30024
chr18 77905807 77936315 + AC139100.2 ENSG00000267270.1 77905807 0.87 1.0 16694 68916
chr18 77915115 78005429 - PARD6G ENSG00000178184.11 78005429 0.82 1.0 16695 31851
Expression level of Genes
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miRNAs possibly regulated by vista28072[chr18:77936891-77937280]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results