EnhancerDB
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  3. vista28075[chr19:290136-290651]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28075[chr19:290136-290651]
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Tissue distribution of vista28075
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Transcription factor that possibly regulate vista28075[chr19:290136-290651]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 289651 291609 POLR2A UCSC Txn Factor no Conserved 108343393
chr19 289651 291609 POLR2A UCSC Txn Factor no Conserved 108343394
chr19 290139 290154 RUNX2 JASPAR yes 70775620
chr19 290173 290187 MTF1 JASPAR yes 70775621
chr19 290181 290196 RFX5 JASPAR yes 70775622
chr19 290193 290207 PLAG1 JASPAR yes 70775623
chr19 290236 290250 ZIC1 JASPAR yes 70775624
chr19 290236 290251 ZIC3 JASPAR yes 70775625
chr19 290236 290251 ZIC4 JASPAR yes 70775626
chr19 290252 290260 NR4A2 JASPAR yes 70775627
chr19 290261 290272 USF1 JASPAR yes 70775628
chr19 290261 290272 USF2 JASPAR yes 70775629
chr19 290261 290275 JUN JASPAR yes 70775630
chr19 290264 290275 FOSL2 JASPAR yes 70775631
chr19 290264 290275 JUNB JASPAR yes 70775632
chr19 290265 290276 FOS JASPAR yes 70775633
chr19 290265 290276 FOSL1 JASPAR yes 70775634
chr19 290265 290276 JUND JASPAR yes 70775635
chr19 290265 290283 MAFF JASPAR yes 70775636
chr19 290266 290273 JUN TRANSFAC yes 70775637
chr19 290266 290277 NFE2L2 JASPAR yes 70775638
chr19 290266 290280 JUN JASPAR yes 70775639
chr19 290266 290281 MAFK JASPAR yes 70775640
chr19 290267 290278 BATF JASPAR yes 70775641
chr19 290310 290323 POU2F2 JASPAR yes 70775642
chr19 290310 290324 POU1F1 JASPAR yes 70775643
chr19 290311 290323 POU3F1 JASPAR yes 70775644
chr19 290311 290323 POU3F2 JASPAR yes 70775645
chr19 290311 290324 POU3F3 JASPAR yes 70775646
chr19 290312 290316 YY1 TRANSFAC yes 70775647
chr19 290312 290324 POU2F1 JASPAR yes 70775648
chr19 290313 290320 POU2F1 TRANSFAC yes 70775649
chr19 290313 290320 POU2F2C TRANSFAC yes 70775650
chr19 290313 290320 POU2F2 TRANSFAC yes 70775651
chr19 290313 290322 POU3F4 JASPAR yes 70775652
chr19 290313 290322 POU5F1B JASPAR yes 70775653
chr19 290326 290343 BCL6B JASPAR yes 70775654
chr19 290355 290370 FOXA1 JASPAR yes 70775655
chr19 290357 290368 FOXP2 JASPAR yes 70775656
chr19 290357 290369 FOXC2 JASPAR yes 70775657
chr19 290358 290366 FOXD1 JASPAR yes 70775658
chr19 290358 290366 FOXG1 JASPAR yes 70775659
chr19 290358 290366 FOXO3 JASPAR yes 70775660
chr19 290358 290369 FOXB1 JASPAR yes 70775661
chr19 290358 290369 FOXC1 JASPAR yes 70775662
chr19 290359 290366 FOXD2 JASPAR yes 70775663
chr19 290359 290366 FOXI1 JASPAR yes 70775664
chr19 290359 290366 FOXL1 JASPAR yes 70775665
chr19 290359 290366 FOXO4 JASPAR yes 70775666
chr19 290359 290366 FOXO6 JASPAR yes 70775667
chr19 290359 290366 FOXP3 JASPAR yes 70775668
chr19 290359 290367 FOXO3 JASPAR yes 70775669
chr19 290359 290370 FOXA1 JASPAR yes 70775670
chr19 290361 290369 FOXL1 JASPAR yes 70775671
chr19 290361 290375 FOXF2 JASPAR yes 70775672
chr19 290361 290376 MEF2C JASPAR yes 70775673
chr19 290362 290376 POU4F1 JASPAR yes 70775674
chr19 290362 290377 MEF2A JASPAR yes 70775675
chr19 290363 290374 FOXC1 JASPAR yes 70775676
chr19 290363 290375 FOXC2 JASPAR yes 70775677
chr19 290364 290376 FOXI1 JASPAR yes 70775678
chr19 290371 290374 MYB TRANSFAC yes 70775679
chr19 290386 290397 FLI1 JASPAR yes 70775680
chr19 290387 290395 FEV JASPAR yes 70775681
chr19 290404 290417 SMAD2 JASPAR yes 70775682
chr19 290432 290440 MEIS2 JASPAR yes 70775683
chr19 290432 290440 MEIS3 JASPAR yes 70775684
chr19 290433 290437 NFE TRANSFAC yes 70775685
chr19 290434 290445 USF1 JASPAR yes 70775686
chr19 290434 290445 USF2 JASPAR yes 70775687
chr19 290435 290442 USF2 TRANSFAC yes 70775688
chr19 290437 290442 USF2 TRANSFAC yes 70775689
chr19 290451 290457 TBP TRANSFAC yes 70775690
chr19 290465 290471 ETS1 JASPAR yes 70775691
chr19 290465 290471 SPI1 JASPAR yes 70775692
chr19 290465 290475 ELK1 JASPAR yes 70775693
chr19 290483 290490 E2F1 TRANSFAC yes 70775694
chr19 290500 290506 YY1 JASPAR yes 70775695
chr19 290509 290522 ELF1 JASPAR yes 70775696
chr19 290516 290537 ZNF263 JASPAR yes 70775697
chr19 290525 290530 TFAP2A TRANSFAC yes 70775698
chr19 290525 290531 MZF1 JASPAR yes 70775699
chr19 290529 290536 CEBPA TRANSFAC yes 70775700
chr19 290533 290544 NFKB1 JASPAR yes 70775701
chr19 290534 290538 LFA1 TRANSFAC yes 70775702
chr19 290537 290551 GLIS3 JASPAR yes 70775703
chr19 290538 290552 EBF1 JASPAR yes 70775704
chr19 290539 290550 EBF1 JASPAR yes 70775705
chr19 290547 290553 GATA3 JASPAR yes 70775706
chr19 290574 290589 RUNX2 JASPAR yes 70775707
chr19 290581 290592 FOXA1 JASPAR yes 70775708
chr19 290581 290596 FOXA1 JASPAR yes 70775709
chr19 290593 290608 HNF4A JASPAR yes 70775710
chr19 290594 290609 HNF4G JASPAR yes 70775711
chr19 290598 290604 LEF1 TRANSFAC yes 70775712
chr19 290598 290604 SOX10 JASPAR yes 70775713
chr19 290610 290625 TFAP2C JASPAR yes 70775714
chr19 290611 290626 ZIC3 JASPAR yes 70775715
chr19 290611 290626 ZIC4 JASPAR yes 70775716
chr19 290618 290624 MAZ TRANSFAC yes 70775717
chr19 290618 290628 SP1 JASPAR yes 70775718
chr19 290624 290629 SP1 TRANSFAC yes 70775719
SNP sites on vista28075[chr19:290136-290651]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 290157 rs140927662 C A
POLR2A
5362864
chr19 290305 rs73916867 A T
POLR2A
5362865
chr19 290307 rs144640091 G C
POLR2A
5362866
chr19 290355 rs73916868 C T
FOXA1 POLR2A
5362867
chr19 290375 rs566802637 C T
FOXC2 FOXF2 FOXI1 MEF2A MEF2C POLR2A POU4F1
5362868
chr19 290440 rs116736601 C G
MEIS2 MEIS3 POLR2A USF1 USF2
5362869
chr19 290470 rs12979151 C A,G
ELK1 ETS1 POLR2A SPI1
5362870
chr19 290539 rs67204914 AC A
EBF1 GLIS3 NFKB1 POLR2A
5362871
chr19 290539 rs773969793 AC A
EBF1 GLIS3 NFKB1 POLR2A
5362872
chr19 290614 rs111920553 C A
POLR2A TFAP2C ZIC3 ZIC4
5362873
chr19 290620 rs145358572 G A
MAZ POLR2A SP1 TFAP2C ZIC3 ZIC4
5362874
chr19 290642 rs8102122 A C
POLR2A
5362875
Genes possibly regulated by vista28075[chr19:290136-290651]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 281040 291393 - PPAP2C ENSG00000141934.5 291393 0.82 1.0 16697 99258
chr19 305575 344798 - MIER2 ENSG00000105556.6 344798 0.68 1.0 16698 45853
chr19 361750 376013 - THEG ENSG00000105549.6 376013 0.94 1.0 16699 14638
Expression level of Genes
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miRNAs possibly regulated by vista28075[chr19:290136-290651]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results