EnhancerDB
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  3. vista28079[chr19:384369-384669]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28079[chr19:384369-384669]
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Tissue distribution of vista28079
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Transcription factor that possibly regulate vista28079[chr19:384369-384669]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 383844 384435 CTCF UCSC Txn Factor no Conserved 108343716
chr19 384362 384373 NFKB1 JASPAR yes 70775790
chr19 384362 384373 NFKB1 JASPAR yes 111960209
chr19 384371 384383 PKNOX1 JASPAR yes 70775791
chr19 384371 384383 PKNOX2 JASPAR yes 70775792
chr19 384371 384383 TGIF1 JASPAR yes 70775793
chr19 384371 384383 TGIF2 JASPAR yes 70775794
chr19 384371 384383 PKNOX1 JASPAR yes 111960210
chr19 384371 384383 PKNOX2 JASPAR yes 111960211
chr19 384371 384383 TGIF1 JASPAR yes 111960212
chr19 384371 384383 TGIF2 JASPAR yes 111960213
chr19 384389 384403 PLAG1 JASPAR yes 70775795
chr19 384389 384403 PLAG1 JASPAR yes 111960214
chr19 384399 384404 SP1 TRANSFAC yes 70775796
chr19 384399 384404 SP1 TRANSFAC yes 111960215
chr19 384402 384407 SP1 TRANSFAC yes 70775797
chr19 384402 384407 SP1 TRANSFAC yes 111960216
chr19 384402 384409 SP1 TRANSFAC yes 70775798
chr19 384402 384409 SP1 TRANSFAC yes 111960217
chr19 384402 384411 SP1 TRANSFAC yes 70775799
chr19 384402 384411 SP1 TRANSFAC yes 111960218
chr19 384407 384417 RELA JASPAR yes 70775800
chr19 384407 384417 REL JASPAR yes 70775801
chr19 384407 384417 RELA JASPAR yes 111960219
chr19 384407 384417 REL JASPAR yes 111960220
chr19 384407 384418 NFKB1 JASPAR yes 70775802
chr19 384407 384418 NFKB1 JASPAR yes 111960221
chr19 384408 384419 NFKB1 JASPAR yes 70775803
chr19 384408 384419 NFKB1 JASPAR yes 111960222
chr19 384412 384426 EBF1 JASPAR yes 70775804
chr19 384412 384426 EBF1 JASPAR yes 111960223
chr19 384413 384424 EBF1 JASPAR yes 70775805
chr19 384413 384424 EBF1 JASPAR yes 111960224
chr19 384440 384451 E2F6 JASPAR yes 70775806
chr19 384440 384451 E2F6 JASPAR yes 111960225
chr19 384468 384484 ZNF143 JASPAR yes 70775807
chr19 384468 384484 ZNF143 JASPAR yes 111960226
chr19 384469 384475 ZNF354C JASPAR yes 70775808
chr19 384469 384475 ZNF354C JASPAR yes 111960227
chr19 384488 384499 STAT1 JASPAR yes 70775809
chr19 384488 384499 STAT1 JASPAR yes 111960228
chr19 384494 384504 SP1 JASPAR yes 70775810
chr19 384494 384504 SP1 JASPAR yes 111960229
chr19 384495 384502 CEBPA TRANSFAC yes 70775811
chr19 384495 384502 CEBPA TRANSFAC yes 111960230
chr19 384514 384533 CTCF JASPAR yes 70775812
chr19 384514 384533 CTCF JASPAR yes 111960231
chr19 384519 384529 ID4 JASPAR yes 70775813
chr19 384519 384529 TCF4 JASPAR yes 70775814
chr19 384519 384529 ID4 JASPAR yes 111960232
chr19 384519 384529 TCF4 JASPAR yes 111960233
chr19 384524 384538 MTF1 JASPAR yes 70775815
chr19 384524 384538 MTF1 JASPAR yes 111960234
chr19 384578 384599 IRF1 JASPAR yes 70775816
chr19 384578 384599 IRF1 JASPAR yes 111960235
chr19 384580 384595 STAT2 JASPAR yes 70775817
chr19 384580 384595 STAT2 JASPAR yes 111960236
chr19 384581 384595 SPI1 JASPAR yes 70775818
chr19 384581 384595 SPIC JASPAR yes 70775819
chr19 384581 384595 STAT1 JASPAR yes 70775820
chr19 384581 384595 SPI1 JASPAR yes 111960237
chr19 384581 384595 SPIC JASPAR yes 111960238
chr19 384581 384595 STAT1 JASPAR yes 111960239
chr19 384589 384604 TFAP2A JASPAR yes 70775821
chr19 384589 384604 TFAP2C JASPAR yes 70775822
chr19 384589 384604 TFAP2A JASPAR yes 111960240
chr19 384589 384604 TFAP2C JASPAR yes 111960241
chr19 384591 384596 ETS2 TRANSFAC yes 70775823
chr19 384591 384596 ETS2 TRANSFAC yes 111960242
chr19 384614 384625 EBF1 JASPAR yes 70775824
chr19 384614 384625 EBF1 JASPAR yes 111960243
chr19 384617 384632 PRDM1 JASPAR yes 70775825
chr19 384617 384632 PRDM1 JASPAR yes 111960244
chr19 384627 384647 TBX19 JASPAR yes 70775826
chr19 384627 384647 TBX19 JASPAR yes 111960245
chr19 384629 384641 NHLH1 JASPAR yes 70775827
chr19 384629 384641 NHLH1 JASPAR yes 111960246
chr19 384629 384645 T JASPAR yes 70775828
chr19 384629 384645 T JASPAR yes 111960247
chr19 384639 384653 IRF8 JASPAR yes 70775829
chr19 384639 384653 IRF8 JASPAR yes 111960248
chr19 384640 384655 PRDM1 JASPAR yes 70775830
chr19 384640 384655 PRDM1 JASPAR yes 111960249
chr19 384645 384651 TCF4 TRANSFAC yes 70775831
chr19 384645 384651 TCF4 TRANSFAC yes 111960250
chr19 384647 384662 MYBL2 JASPAR yes 70775832
chr19 384647 384662 MYBL2 JASPAR yes 111960251
chr19 384657 384661 NFE TRANSFAC yes 70775833
chr19 384657 384661 NFE TRANSFAC yes 111960252
chr19 384660 384666 MZF1 JASPAR yes 70775834
chr19 384660 384666 MZF1 JASPAR yes 111960253
SNP sites on vista28079[chr19:384369-384669]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 384431 rs570211353 A C
CTCF
5363213
chr19 384517 rs59372439 C T
CTCF
5363214
chr19 384530 rs73916940 G A
CTCF MTF1
5363215
chr19 384644 rs12151104 A G
IRF8 PRDM1 T TBX19
5363216
Genes possibly regulated by vista28079[chr19:384369-384669]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 281040 291393 - PPAP2C ENSG00000141934.5 291393 0.82 1.0 16697 7024
chr19 305575 344798 - MIER2 ENSG00000105556.6 344798 0.68 1.0 16698 60429
chr19 361750 376013 - THEG ENSG00000105549.6 376013 0.94 1.0 16699 91644
chr19 405438 409139 - C2CD4C ENSG00000183186.6 409139 0.8 1.0 16700 75530
chr19 416583 460996 - SHC2 ENSG00000129946.6 460996 0.87 1.0 16701 23673
chr19 463346 474983 - ODF3L2 ENSG00000181781.5 474983 0.86 1.0 16702 9686
Expression level of Genes
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miRNAs possibly regulated by vista28079[chr19:384369-384669]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results