EnhancerDB
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  3. vista28084[chr19:461817-462164]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28084[chr19:461817-462164]
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Tissue distribution of vista28084
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Transcription factor that possibly regulate vista28084[chr19:461817-462164]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 461795 462522 TCF7L2 UCSC Txn Factor no Conserved 108343823
chr19 461834 461839 ETS2 TRANSFAC yes 70775939
chr19 461855 461873 ESR2 JASPAR yes 70775940
chr19 461856 461873 ESR1 JASPAR yes 70775941
chr19 461857 461872 ESR2 JASPAR yes 70775942
chr19 461857 461877 ESR1 JASPAR yes 70775943
chr19 461863 461867 NFE TRANSFAC yes 70775944
chr19 461876 461886 SP1 JASPAR yes 70775945
chr19 461877 461887 SP1 JASPAR yes 70775946
chr19 461901 461912 NFKB1 JASPAR yes 70775947
chr19 461907 461924 RXRA JASPAR yes 70775948
chr19 461912 461922 ID4 JASPAR yes 70775949
chr19 461912 461922 TCF3 JASPAR yes 70775950
chr19 461912 461922 TCF4 JASPAR yes 70775951
chr19 461913 461922 SNAI2 JASPAR yes 70775952
chr19 461914 461919 USF2 TRANSFAC yes 70775953
chr19 461917 461923 NFE2 TRANSFAC yes 70775954
chr19 461919 461928 SP1 TRANSFAC yes 70775955
chr19 461920 461926 SP1 TRANSFAC yes 70775956
chr19 461920 461930 SP1 JASPAR yes 70775957
chr19 461921 461928 SP1 TRANSFAC yes 70775958
chr19 461922 461927 SP1 TRANSFAC yes 70775959
chr19 461922 461928 SP1 TRANSFAC yes 70775960
chr19 461923 461934 TFAP2A JASPAR yes 70775961
chr19 461923 461934 TFAP2B JASPAR yes 70775962
chr19 461923 461934 TFAP2C JASPAR yes 70775963
chr19 461939 461954 STAT1 JASPAR yes 70775964
chr19 461941 461952 STAT1 JASPAR yes 70775965
chr19 461941 461952 STAT3 JASPAR yes 70775966
chr19 461950 461956 SOX10 JASPAR yes 70775967
chr19 461955 461961 MAZ TRANSFAC yes 70775968
chr19 461959 461964 SP1 TRANSFAC yes 70775969
chr19 461959 461966 SP1 TRANSFAC yes 70775970
chr19 461975 461984 SNAI2 JASPAR yes 70775971
chr19 461975 461985 TCF4 JASPAR yes 70775972
chr19 461977 461986 ZEB1 JASPAR yes 70775973
chr19 461979 461984 SP1 TRANSFAC yes 70775974
chr19 461980 461990 ZNF740 JASPAR yes 70775975
chr19 461981 461986 TFAP2A TRANSFAC yes 70775976
chr19 461981 461987 MZF1 JASPAR yes 70775977
chr19 461981 462002 ZNF263 JASPAR yes 70775978
chr19 461983 461989 MAZ TRANSFAC yes 70775979
chr19 461983 461994 E2F6 JASPAR yes 70775980
chr19 461985 461993 SP1 TRANSFAC yes 70775981
chr19 461985 462006 ZNF263 JASPAR yes 70775982
chr19 461987 461993 MAZ TRANSFAC yes 70775983
chr19 461987 461998 E2F6 JASPAR yes 70775984
chr19 461989 461997 SP1 TRANSFAC yes 70775985
chr19 461989 461999 SP1 JASPAR yes 70775986
chr19 461991 461997 MAZ TRANSFAC yes 70775987
chr19 461996 462016 ESR1 JASPAR yes 70775988
chr19 462004 462013 THAP1 JASPAR yes 70775989
chr19 462006 462015 TFAP2A JASPAR yes 70775990
chr19 462016 462026 CUX1 JASPAR yes 70775991
chr19 462016 462026 CUX2 JASPAR yes 70775992
chr19 462030 462045 JUND JASPAR yes 70775993
chr19 462050 462064 ZIC1 JASPAR yes 70775994
chr19 462050 462065 ZIC4 JASPAR yes 70775995
chr19 462052 462057 SP1 TRANSFAC yes 70775996
chr19 462053 462066 TFAP2A JASPAR yes 70775997
chr19 462053 462066 TFAP2B JASPAR yes 70775998
chr19 462053 462066 TFAP2C JASPAR yes 70775999
chr19 462054 462063 TFAP2A JASPAR yes 70776000
chr19 462059 462080 ZNF263 JASPAR yes 70776001
chr19 462060 462065 SP1 TRANSFAC yes 70776002
chr19 462060 462067 SP1 TRANSFAC yes 70776003
chr19 462060 462070 SP1 JASPAR yes 70776004
chr19 462060 462081 ZNF263 JASPAR yes 70776005
chr19 462065 462086 ZNF263 JASPAR yes 70776006
chr19 462068 462078 SP1 JASPAR yes 70776007
chr19 462068 462089 ZNF263 JASPAR yes 70776008
chr19 462071 462076 SP1 TRANSFAC yes 70776009
chr19 462072 462082 ZNF740 JASPAR yes 70776010
chr19 462074 462083 SP1 TRANSFAC yes 70776011
chr19 462074 462084 SP1 JASPAR yes 70776012
chr19 462075 462084 SP1 TRANSFAC yes 70776013
chr19 462076 462082 MAZ TRANSFAC yes 70776014
chr19 462120 462132 HES5 JASPAR yes 70776015
chr19 462120 462132 HES7 JASPAR yes 70776016
chr19 462121 462131 HEY1 JASPAR yes 70776017
chr19 462121 462131 HEY2 JASPAR yes 70776018
chr19 462138 462149 NRF1 JASPAR yes 70776019
chr19 462143 462154 NRF1 JASPAR yes 70776020
chr19 462144 462156 HINFP JASPAR yes 70776021
chr19 462150 462161 E2F4 JASPAR yes 70776022
SNP sites on vista28084[chr19:461817-462164]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 461876 rs201457750 G A
ESR1 SP1 TCF7L2
5363990
chr19 461907 rs186627773 C G
NFKB1 RXRA TCF7L2
5363991
chr19 461912 rs10424888 C A,G
ID4 NFKB1 RXRA TCF3 TCF4 TCF7L2
5363992
chr19 461999 rs558416041 G A
ESR1 SP1 TCF7L2 ZNF263
5363993
chr19 462002 rs570220069 A G
ESR1 TCF7L2 ZNF263
5363994
Genes possibly regulated by vista28084[chr19:461817-462164]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 361750 376013 - THEG ENSG00000105549.6 376013 0.94 1.0 16699 14196
chr19 405438 409139 - C2CD4C ENSG00000183186.6 409139 0.8 1.0 16700 47322
chr19 416583 460996 - SHC2 ENSG00000129946.6 460996 0.87 1.0 16701 99179
chr19 463346 474983 - ODF3L2 ENSG00000181781.5 474983 0.86 1.0 16702 87181
chr19 489176 505347 + MADCAM1 ENSG00000099866.10 489176 0.8 0.87 16703 72988
chr19 507299 519654 + TPGS1 ENSG00000141933.8 507299 0.64 1.0 16704 54865
chr19 531714 542097 + CDC34 ENSG00000099804.4 531714 0.52 1.0 16705 30450
chr19 544034 549919 + GZMM ENSG00000197540.3 544034 0.95 1.0 16706 18130
Expression level of Genes
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miRNAs possibly regulated by vista28084[chr19:461817-462164]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results