EnhancerDB
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  3. vista28089[chr19:511222-511648]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28089[chr19:511222-511648]
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Tissue distribution of vista28089
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Transcription factor that possibly regulate vista28089[chr19:511222-511648]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 510458 511812 POLR2A UCSC Txn Factor no Conserved 108344254
chr19 510458 511812 POLR2A UCSC Txn Factor no Conserved 108344255
chr19 511064 511580 TCF7L2 UCSC Txn Factor no Conserved 108344476
chr19 511346 511634 TCF12 UCSC Txn Factor no Conserved 108344495
chr19 511233 511254 ZNF263 JASPAR yes 70776189
chr19 511233 511254 ZNF263 JASPAR yes 111964367
chr19 511235 511249 SPIC JASPAR yes 70776190
chr19 511235 511249 SPIC JASPAR yes 111964368
chr19 511236 511244 EHF JASPAR yes 70776191
chr19 511236 511244 EHF JASPAR yes 111964369
chr19 511236 511257 ZNF263 JASPAR yes 70776192
chr19 511236 511257 ZNF263 JASPAR yes 111964370
chr19 511238 511245 SPIB JASPAR yes 70776193
chr19 511238 511245 SPIB JASPAR yes 111964371
chr19 511239 511260 ZNF263 JASPAR yes 70776194
chr19 511239 511260 ZNF263 JASPAR yes 111964372
chr19 511241 511254 ELF1 JASPAR yes 70776195
chr19 511241 511254 ELF1 JASPAR yes 111964373
chr19 511242 511263 ZNF263 JASPAR yes 70776196
chr19 511242 511263 ZNF263 JASPAR yes 111964374
chr19 511243 511264 ZNF263 JASPAR yes 70776197
chr19 511243 511264 ZNF263 JASPAR yes 111964375
chr19 511247 511257 SP1 JASPAR yes 70776198
chr19 511247 511257 SP1 JASPAR yes 111964376
chr19 511251 511272 ZNF263 JASPAR yes 70776199
chr19 511251 511272 ZNF263 JASPAR yes 111964377
chr19 511257 511267 SREBF1 JASPAR yes 70776200
chr19 511257 511267 SREBF1 JASPAR yes 111964378
chr19 511281 511286 SP1 TRANSFAC yes 70776201
chr19 511281 511286 SP1 TRANSFAC yes 111964379
chr19 511300 511305 SP1 TRANSFAC yes 70776202
chr19 511300 511305 SP1 TRANSFAC yes 111964380
chr19 511301 511306 SP1 TRANSFAC yes 70776203
chr19 511301 511306 SP1 TRANSFAC yes 111964381
chr19 511319 511328 NKX2-8 JASPAR yes 70776204
chr19 511319 511328 NKX2-8 JASPAR yes 111964382
chr19 511319 511329 NKX2-3 JASPAR yes 70776205
chr19 511319 511329 NKX2-3 JASPAR yes 111964383
chr19 511325 511338 SMAD2 JASPAR yes 70776206
chr19 511325 511338 SMAD2 JASPAR yes 111964384
chr19 511328 511336 MEIS2 JASPAR yes 70776207
chr19 511328 511336 MEIS3 JASPAR yes 70776208
chr19 511328 511336 MEIS2 JASPAR yes 111964385
chr19 511328 511336 MEIS3 JASPAR yes 111964386
chr19 511329 511333 NFE TRANSFAC yes 70776209
chr19 511329 511333 NFE TRANSFAC yes 111964387
chr19 511333 511344 FLI1 JASPAR yes 70776210
chr19 511333 511344 FLI1 JASPAR yes 111964388
chr19 511334 511344 GABPA JASPAR yes 70776211
chr19 511334 511344 GABPA JASPAR yes 111964389
chr19 511335 511343 EHF JASPAR yes 70776212
chr19 511335 511343 EHF JASPAR yes 111964390
chr19 511340 511344 NFE TRANSFAC yes 70776213
chr19 511340 511344 NFE TRANSFAC yes 111964391
chr19 511345 511359 BATF3 JASPAR yes 70776214
chr19 511345 511359 BATF3 JASPAR yes 111964392
chr19 511351 511367 RFX3 JASPAR yes 70776215
chr19 511351 511367 RFX4 JASPAR yes 70776216
chr19 511351 511367 RFX3 JASPAR yes 111964393
chr19 511351 511367 RFX4 JASPAR yes 111964394
chr19 511379 511389 EVX1 JASPAR yes 70776217
chr19 511379 511389 EVX2 JASPAR yes 70776218
chr19 511379 511389 HOXA2 JASPAR yes 70776219
chr19 511379 511389 HOXB2 JASPAR yes 70776220
chr19 511379 511389 MEOX1 JASPAR yes 70776221
chr19 511379 511389 MEOX2 JASPAR yes 70776222
chr19 511379 511389 EVX1 JASPAR yes 111964395
chr19 511379 511389 EVX2 JASPAR yes 111964396
chr19 511379 511389 HOXA2 JASPAR yes 111964397
chr19 511379 511389 HOXB2 JASPAR yes 111964398
chr19 511379 511389 MEOX1 JASPAR yes 111964399
chr19 511379 511389 MEOX2 JASPAR yes 111964400
chr19 511390 511396 SOX10 JASPAR yes 70776223
chr19 511390 511396 SOX10 JASPAR yes 111964401
chr19 511398 511408 GABPA JASPAR yes 70776224
chr19 511398 511408 GABPA JASPAR yes 111964402
chr19 511398 511411 ELF1 JASPAR yes 70776225
chr19 511398 511411 ELF1 JASPAR yes 111964403
chr19 511404 511410 NFE2 TRANSFAC yes 70776226
chr19 511404 511410 NFE2 TRANSFAC yes 111964404
chr19 511404 511419 TFAP2A JASPAR yes 70776227
chr19 511404 511419 TFAP2A JASPAR yes 111964405
chr19 511406 511419 TFAP2A JASPAR yes 70776228
chr19 511406 511419 TFAP2B JASPAR yes 70776229
chr19 511406 511419 TFAP2C JASPAR yes 70776230
chr19 511406 511419 TFAP2A JASPAR yes 111964406
chr19 511406 511419 TFAP2B JASPAR yes 111964407
chr19 511406 511419 TFAP2C JASPAR yes 111964408
chr19 511407 511419 TFAP2A JASPAR yes 70776231
chr19 511407 511419 TFAP2B JASPAR yes 70776232
chr19 511407 511419 TFAP2C JASPAR yes 70776233
chr19 511407 511419 TFAP2A JASPAR yes 111964409
chr19 511407 511419 TFAP2B JASPAR yes 111964410
chr19 511407 511419 TFAP2C JASPAR yes 111964411
chr19 511413 511426 ZBTB18 JASPAR yes 70776234
chr19 511413 511426 ZBTB18 JASPAR yes 111964412
chr19 511414 511426 NHLH1 JASPAR yes 70776235
chr19 511414 511426 NHLH1 JASPAR yes 111964413
chr19 511415 511425 NHLH1 JASPAR yes 70776236
chr19 511415 511425 NHLH1 JASPAR yes 111964414
chr19 511419 511434 RFX5 JASPAR yes 70776237
chr19 511419 511434 RFX5 JASPAR yes 111964415
chr19 511438 511448 ALX3 JASPAR yes 70776238
chr19 511438 511448 EMX1 JASPAR yes 70776239
chr19 511438 511448 EMX2 JASPAR yes 70776240
chr19 511438 511448 EVX2 JASPAR yes 70776241
chr19 511438 511448 GSX1 JASPAR yes 70776242
chr19 511438 511448 GSX2 JASPAR yes 70776243
chr19 511438 511448 HOXA2 JASPAR yes 70776244
chr19 511438 511448 HOXB2 JASPAR yes 70776245
chr19 511438 511448 HOXB3 JASPAR yes 70776246
chr19 511438 511448 MEOX1 JASPAR yes 70776247
chr19 511438 511448 MEOX2 JASPAR yes 70776248
chr19 511438 511448 NOTO JASPAR yes 70776249
chr19 511438 511448 ALX3 JASPAR yes 111964416
chr19 511438 511448 EMX1 JASPAR yes 111964417
chr19 511438 511448 EMX2 JASPAR yes 111964418
chr19 511438 511448 EVX2 JASPAR yes 111964419
chr19 511438 511448 GSX1 JASPAR yes 111964420
chr19 511438 511448 GSX2 JASPAR yes 111964421
chr19 511438 511448 HOXA2 JASPAR yes 111964422
chr19 511438 511448 HOXB2 JASPAR yes 111964423
chr19 511438 511448 HOXB3 JASPAR yes 111964424
chr19 511438 511448 MEOX1 JASPAR yes 111964425
chr19 511438 511448 MEOX2 JASPAR yes 111964426
chr19 511438 511448 NOTO JASPAR yes 111964427
chr19 511439 511447 DLX6 JASPAR yes 70776250
chr19 511439 511447 EN1 JASPAR yes 70776251
chr19 511439 511447 LBX1 JASPAR yes 70776252
chr19 511439 511447 PAX4 JASPAR yes 70776253
chr19 511439 511447 PDX1 JASPAR yes 70776254
chr19 511439 511447 VAX1 JASPAR yes 70776255
chr19 511439 511447 VAX2 JASPAR yes 70776256
chr19 511439 511447 VSX1 JASPAR yes 70776257
chr19 511439 511447 VSX2 JASPAR yes 70776258
chr19 511439 511447 DLX6 JASPAR yes 111964428
chr19 511439 511447 EN1 JASPAR yes 111964429
chr19 511439 511447 LBX1 JASPAR yes 111964430
chr19 511439 511447 PAX4 JASPAR yes 111964431
chr19 511439 511447 PDX1 JASPAR yes 111964432
chr19 511439 511447 VAX1 JASPAR yes 111964433
chr19 511439 511447 VAX2 JASPAR yes 111964434
chr19 511439 511447 VSX1 JASPAR yes 111964435
chr19 511439 511447 VSX2 JASPAR yes 111964436
chr19 511444 511461 ZNF410 JASPAR yes 70776259
chr19 511444 511461 ZNF410 JASPAR yes 111964437
chr19 511446 511461 MEF2C JASPAR yes 70776260
chr19 511446 511461 MEF2C JASPAR yes 111964438
chr19 511447 511462 MEF2A JASPAR yes 70776261
chr19 511447 511462 MEF2A JASPAR yes 111964439
chr19 511458 511467 SNAI2 JASPAR yes 70776262
chr19 511458 511467 SNAI2 JASPAR yes 111964440
chr19 511458 511468 TCF3 JASPAR yes 70776263
chr19 511458 511468 TCF4 JASPAR yes 70776264
chr19 511458 511468 TCF3 JASPAR yes 111964441
chr19 511458 511468 TCF4 JASPAR yes 111964442
chr19 511460 511469 ZEB1 JASPAR yes 70776265
chr19 511460 511469 ZEB1 JASPAR yes 111964443
chr19 511462 511467 SP1 TRANSFAC yes 70776266
chr19 511462 511467 SP1 TRANSFAC yes 111964444
chr19 511465 511470 SP1 TRANSFAC yes 70776267
chr19 511465 511470 SP1 TRANSFAC yes 111964445
chr19 511483 511493 MSC JASPAR yes 70776268
chr19 511483 511493 MSC JASPAR yes 111964446
chr19 511491 511495 NFE TRANSFAC yes 70776269
chr19 511491 511495 NFE TRANSFAC yes 111964447
chr19 511499 511509 ID4 JASPAR yes 70776270
chr19 511499 511509 TCF3 JASPAR yes 70776271
chr19 511499 511509 TCF4 JASPAR yes 70776272
chr19 511499 511509 ID4 JASPAR yes 111964448
chr19 511499 511509 TCF3 JASPAR yes 111964449
chr19 511499 511509 TCF4 JASPAR yes 111964450
chr19 511501 511506 USF2 TRANSFAC yes 70776273
chr19 511501 511506 USF2 TRANSFAC yes 111964451
chr19 511562 511572 ID4 JASPAR yes 70776274
chr19 511562 511572 TCF4 JASPAR yes 70776275
chr19 511562 511572 ID4 JASPAR yes 111964452
chr19 511562 511572 TCF4 JASPAR yes 111964453
chr19 511571 511585 STAT1 JASPAR yes 70776276
chr19 511571 511585 STAT1 JASPAR yes 111964454
chr19 511571 511586 PRDM1 JASPAR yes 70776277
chr19 511571 511586 PRDM1 JASPAR yes 111964455
chr19 511586 511598 NHLH1 JASPAR yes 70776278
chr19 511586 511598 NHLH1 JASPAR yes 111964456
chr19 511586 511599 ZBTB18 JASPAR yes 70776279
chr19 511586 511599 ZBTB18 JASPAR yes 111964457
chr19 511587 511597 NHLH1 JASPAR yes 70776280
chr19 511587 511597 NHLH1 JASPAR yes 111964458
chr19 511592 511602 SP1 JASPAR yes 70776281
chr19 511592 511602 SP1 JASPAR yes 111964459
chr19 511594 511600 MAZ TRANSFAC yes 70776282
chr19 511594 511600 MAZ TRANSFAC yes 111964460
chr19 511599 511603 LFA1 TRANSFAC yes 70776283
chr19 511599 511603 LFA1 TRANSFAC yes 111964461
chr19 511614 511634 TP53 JASPAR yes 70776284
chr19 511614 511634 TP53 JASPAR yes 111964462
chr19 511616 511636 TP63 JASPAR yes 70776285
chr19 511616 511636 TP63 JASPAR yes 111964463
SNP sites on vista28089[chr19:511222-511648]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 511292 rs61432952 G A
POLR2A TCF7L2
5364563
chr19 511453 rs3745924 A G
MEF2A MEF2C POLR2A TCF12 TCF7L2 ZNF410
5364564
chr19 511468 rs186608433 G T
POLR2A SP1 TCF12 TCF3 TCF4 TCF7L2 ZEB1
5364565
chr19 511508 rs191802731 G A
ID4 POLR2A TCF12 TCF3 TCF4 TCF7L2
5364566
chr19 511526 rs182442286 C T
POLR2A TCF12 TCF7L2
5364567
chr19 511549 rs563739221 C T
POLR2A TCF12 TCF7L2
5364568
chr19 511615 rs573568513 C G,T
POLR2A TCF12 TP53
5364569
Genes possibly regulated by vista28089[chr19:511222-511648]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 416583 460996 - SHC2 ENSG00000129946.6 460996 0.87 1.0 16701 49774
chr19 463346 474983 - ODF3L2 ENSG00000181781.5 474983 0.86 1.0 16702 63761
chr19 489176 505347 + MADCAM1 ENSG00000099866.10 489176 0.8 0.87 16703 77954
chr19 507299 519654 + TPGS1 ENSG00000141933.8 507299 0.64 1.0 16704 96077
chr19 531714 542097 + CDC34 ENSG00000099804.4 531714 0.52 1.0 16705 79934
chr19 544034 549919 + GZMM ENSG00000197540.3 544034 0.95 1.0 16706 67614
chr19 571297 583493 + BSG ENSG00000172270.14 571297 0.64 1.0 16707 40351
chr19 589893 617159 + HCN2 ENSG00000099822.2 589893 0.94 0.98 16708 21755
Expression level of Genes
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miRNAs possibly regulated by vista28089[chr19:511222-511648]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results