EnhancerDB
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  3. vista28091[chr19:555976-556322]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28091[chr19:555976-556322]
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Tissue distribution of vista28091
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Transcription factor that possibly regulate vista28091[chr19:555976-556322]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 555872 556999 POLR2A UCSC Txn Factor no Conserved 108344853
chr19 555959 556216 NR2F2 UCSC Txn Factor no Conserved 108344915
chr19 556008 556245 TAL1 UCSC Txn Factor no Conserved 108344950
chr19 556013 556243 TEAD4 UCSC Txn Factor no Conserved 108344954
chr19 556027 556227 GATA2 UCSC Txn Factor no Conserved 108344964
chr19 556063 556369 NR3C1 UCSC Txn Factor no Conserved 108344990
chr19 555966 555987 ZNF263 JASPAR yes 70776341
chr19 555966 555987 ZNF263 JASPAR yes 111967095
chr19 555979 555998 CTCF JASPAR yes 70776342
chr19 555979 555998 CTCF JASPAR yes 111967097
chr19 555981 555992 EBF1 JASPAR yes 70776343
chr19 555981 555992 EBF1 JASPAR yes 111967098
chr19 555986 555999 NR2F1 JASPAR yes 70776344
chr19 555986 555999 NR2F1 JASPAR yes 111967099
chr19 555987 556002 HNF4G JASPAR yes 70776345
chr19 555987 556002 HNF4G JASPAR yes 111967100
chr19 555987 556005 ESR2 JASPAR yes 70776346
chr19 555987 556005 ESR2 JASPAR yes 111967101
chr19 555988 555996 NR4A2 JASPAR yes 70776347
chr19 555988 555996 NR4A2 JASPAR yes 111967102
chr19 555988 556002 RXRB JASPAR yes 70776348
chr19 555988 556002 RXRG JASPAR yes 70776349
chr19 555988 556002 RXRB JASPAR yes 111967103
chr19 555988 556002 RXRG JASPAR yes 111967104
chr19 555988 556003 HNF4A JASPAR yes 70776350
chr19 555988 556003 HNF4A JASPAR yes 111967105
chr19 555989 556004 ESR2 JASPAR yes 70776351
chr19 555989 556004 ESR2 JASPAR yes 111967106
chr19 555990 555994 ESR1 TRANSFAC yes 70776352
chr19 555990 555994 ESR1 TRANSFAC yes 111967107
chr19 555997 556001 LFA1 TRANSFAC yes 70776353
chr19 555997 556001 LFA1 TRANSFAC yes 111967108
chr19 556000 556020 RREB1 JASPAR yes 70776354
chr19 556000 556020 RREB1 JASPAR yes 111967109
chr19 556002 556007 SP1 TRANSFAC yes 70776355
chr19 556002 556007 SP1 TRANSFAC yes 111967110
chr19 556002 556008 SP1 TRANSFAC yes 70776356
chr19 556002 556008 SP1 TRANSFAC yes 111967111
chr19 556002 556022 RREB1 JASPAR yes 70776357
chr19 556002 556022 RREB1 JASPAR yes 111967112
chr19 556003 556023 RREB1 JASPAR yes 70776358
chr19 556003 556023 RREB1 JASPAR yes 111967113
chr19 556003 556024 ZNF263 JASPAR yes 70776359
chr19 556003 556024 ZNF263 JASPAR yes 111967114
chr19 556004 556013 SP1 TRANSFAC yes 70776360
chr19 556004 556013 SP1 TRANSFAC yes 111967115
chr19 556004 556024 RREB1 JASPAR yes 70776361
chr19 556004 556024 RREB1 JASPAR yes 111967116
chr19 556005 556025 RREB1 JASPAR yes 70776362
chr19 556005 556025 RREB1 JASPAR yes 111967117
chr19 556007 556027 RREB1 JASPAR yes 70776363
chr19 556007 556027 RREB1 JASPAR yes 111967118
chr19 556008 556022 PLAG1 JASPAR yes 70776364
chr19 556008 556022 PLAG1 JASPAR yes 111967119
chr19 556008 556028 RREB1 JASPAR yes 70776365
chr19 556008 556028 RREB1 JASPAR yes 111967120
chr19 556009 556019 SP1 JASPAR yes 70776366
chr19 556009 556019 SP1 JASPAR yes 111967121
chr19 556009 556029 RREB1 JASPAR yes 70776367
chr19 556009 556029 RREB1 JASPAR yes 111967122
chr19 556010 556020 SP1 JASPAR yes 70776368
chr19 556010 556020 SP1 JASPAR yes 111967123
chr19 556010 556030 RREB1 JASPAR yes 70776369
chr19 556010 556030 RREB1 JASPAR yes 111967124
chr19 556012 556032 RREB1 JASPAR yes 70776370
chr19 556012 556032 RREB1 JASPAR yes 111967125
chr19 556014 556024 SP1 JASPAR yes 70776371
chr19 556014 556024 SP1 JASPAR yes 111967126
chr19 556014 556034 RREB1 JASPAR yes 70776372
chr19 556014 556034 RREB1 JASPAR yes 111967127
chr19 556018 556028 SP1 JASPAR yes 70776373
chr19 556018 556028 SP1 JASPAR yes 111967128
chr19 556019 556029 SP1 JASPAR yes 70776374
chr19 556019 556029 SP1 JASPAR yes 111967129
chr19 556019 556033 ZIC1 JASPAR yes 70776375
chr19 556019 556033 ZIC1 JASPAR yes 111967130
chr19 556019 556034 ZIC3 JASPAR yes 70776376
chr19 556019 556034 ZIC4 JASPAR yes 70776377
chr19 556019 556034 ZIC3 JASPAR yes 111967131
chr19 556019 556034 ZIC4 JASPAR yes 111967132
chr19 556031 556035 H4TF2 TRANSFAC yes 70776378
chr19 556031 556035 H4TF2 TRANSFAC yes 111967133
chr19 556035 556045 SREBF1 JASPAR yes 70776379
chr19 556035 556045 SREBF2 JASPAR yes 70776380
chr19 556035 556045 SREBF1 JASPAR yes 111967134
chr19 556035 556045 SREBF2 JASPAR yes 111967135
chr19 556038 556057 CTCF JASPAR yes 70776381
chr19 556038 556057 CTCF JASPAR yes 111967136
chr19 556078 556096 NFYA JASPAR yes 70776382
chr19 556078 556096 NFYA JASPAR yes 111967137
chr19 556082 556094 FOXI1 JASPAR yes 70776383
chr19 556082 556094 FOXI1 JASPAR yes 111967138
chr19 556104 556109 SP1 TRANSFAC yes 70776384
chr19 556104 556109 SP1 TRANSFAC yes 111967139
chr19 556106 556115 TFAP2A JASPAR yes 70776385
chr19 556106 556115 TFAP2A JASPAR yes 111967140
chr19 556120 556130 GSC JASPAR yes 70776386
chr19 556120 556130 GSC JASPAR yes 111967141
chr19 556139 556150 NFE2 JASPAR yes 70776387
chr19 556139 556150 NFE2 JASPAR yes 111967142
chr19 556153 556164 E2F6 JASPAR yes 70776388
chr19 556153 556164 E2F6 JASPAR yes 111967143
chr19 556156 556170 ZIC1 JASPAR yes 70776389
chr19 556156 556170 ZIC1 JASPAR yes 111967144
chr19 556156 556171 ZIC3 JASPAR yes 70776390
chr19 556156 556171 ZIC4 JASPAR yes 70776391
chr19 556156 556171 ZIC3 JASPAR yes 111967145
chr19 556156 556171 ZIC4 JASPAR yes 111967146
chr19 556178 556184 MZF1 JASPAR yes 70776392
chr19 556178 556184 MZF1 JASPAR yes 111967147
chr19 556185 556193 SP1 TRANSFAC yes 70776393
chr19 556185 556193 SP1 TRANSFAC yes 111967148
chr19 556204 556209 TFAP2A TRANSFAC yes 70776394
chr19 556204 556209 TFAP2A TRANSFAC yes 111967149
chr19 556204 556210 MZF1 JASPAR yes 70776395
chr19 556204 556210 MZF1 JASPAR yes 111967150
chr19 556229 556248 CTCF JASPAR yes 70776396
chr19 556229 556248 CTCF JASPAR yes 111967151
chr19 556239 556252 SMAD2 JASPAR yes 70776397
chr19 556239 556252 SMAD2 JASPAR yes 111967152
chr19 556256 556273 NR3C1 JASPAR yes 70776398
chr19 556256 556273 NR3C2 JASPAR yes 70776399
chr19 556256 556273 NR3C1 JASPAR yes 111967153
chr19 556256 556273 NR3C2 JASPAR yes 111967154
chr19 556285 556291 SP1 TRANSFAC yes 70776400
chr19 556285 556291 SP1 TRANSFAC yes 111967155
chr19 556294 556309 FOXP1 JASPAR yes 70776401
chr19 556294 556309 FOXP1 JASPAR yes 111967156
chr19 556297 556312 RUNX2 JASPAR yes 70776402
chr19 556297 556312 RUNX2 JASPAR yes 111967157
chr19 556304 556319 STAT2 JASPAR yes 70776403
chr19 556304 556319 STAT2 JASPAR yes 111967158
chr19 556308 556323 FOXP1 JASPAR yes 70776404
chr19 556308 556323 FOXP1 JASPAR yes 111967159
chr19 556317 556337 PPARG JASPAR yes 70776405
chr19 556317 556337 PPARG JASPAR yes 111967160
chr19 556320 556335 ESR2 JASPAR yes 70776406
chr19 556320 556335 ESR2 JASPAR yes 111967161
chr19 556320 556340 ESR1 JASPAR yes 70776407
chr19 556320 556340 ESR1 JASPAR yes 111967162
SNP sites on vista28091[chr19:555976-556322]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 556010 rs186037410 A G
NR2F2 PLAG1 POLR2A RREB1 SP1 TAL1 ZNF263
5365117
chr19 556021 rs544541153 C T
NR2F2 PLAG1 POLR2A RREB1 SP1 TAL1 TEAD4 ZIC1 ZIC3 ZIC4 ZNF263
5365118
chr19 556112 rs12462132 G A
GATA2 NR2F2 NR3C1 POLR2A TAL1 TEAD4 TFAP2A
5365119
chr19 556141 rs73918122 G A
GATA2 NFE2 NR2F2 NR3C1 POLR2A TAL1 TEAD4
5365120
chr19 556180 rs560643147 C T
GATA2 MZF1 NR2F2 NR3C1 POLR2A TAL1 TEAD4
5365121
chr19 556185 rs527734399 C A
GATA2 NR2F2 NR3C1 POLR2A SP1 TAL1 TEAD4
5365122
chr19 556249 rs564513690 A C
NR3C1 POLR2A SMAD2
5365123
chr19 556308 rs8106283 G T
FOXP1 NR3C1 POLR2A RUNX2 STAT2
5365124
Genes possibly regulated by vista28091[chr19:555976-556322]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 416583 460996 - SHC2 ENSG00000129946.6 460996 0.87 1.0 16701 5020
chr19 463346 474983 - ODF3L2 ENSG00000181781.5 474983 0.86 1.0 16702 19007
chr19 489176 505347 + MADCAM1 ENSG00000099866.10 489176 0.8 0.87 16703 33200
chr19 507299 519654 + TPGS1 ENSG00000141933.8 507299 0.64 1.0 16704 51323
chr19 531714 542097 + CDC34 ENSG00000099804.4 531714 0.52 1.0 16705 75738
chr19 544034 549919 + GZMM ENSG00000197540.3 544034 0.95 1.0 16706 88058
chr19 571297 583493 + BSG ENSG00000172270.14 571297 0.64 1.0 16707 85025
chr19 589893 617159 + HCN2 ENSG00000099822.2 589893 0.94 0.98 16708 66429
chr19 617223 633597 - POLRMT ENSG00000099821.9 633597 0.61 1.0 16709 22725
chr19 639879 643703 + FGF22 ENSG00000070388.7 639879 0.92 1.0 16710 16443
Expression level of Genes
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miRNAs possibly regulated by vista28091[chr19:555976-556322]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results