EnhancerDB
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  3. vista28096[chr19:660293-660821]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28096[chr19:660293-660821]
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Tissue distribution of vista28096
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Transcription factor that possibly regulate vista28096[chr19:660293-660821]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 660365 660681 EBF1 UCSC Txn Factor no Conserved 108345292
chr19 660292 660303 NFE2L2 JASPAR yes 70776539
chr19 660292 660303 NFE2L2 JASPAR yes 111969510
chr19 660295 660307 NHLH1 JASPAR yes 70776540
chr19 660295 660307 NHLH1 JASPAR yes 111969511
chr19 660296 660306 NHLH1 JASPAR yes 70776541
chr19 660296 660306 NHLH1 JASPAR yes 111969512
chr19 660307 660312 SP1 TRANSFAC yes 70776542
chr19 660307 660312 SP1 TRANSFAC yes 111969513
chr19 660323 660344 REST JASPAR yes 70776543
chr19 660323 660344 REST JASPAR yes 111969514
chr19 660324 660343 REST JASPAR yes 70776544
chr19 660324 660343 REST JASPAR yes 111969515
chr19 660358 660370 NHLH1 JASPAR yes 70776545
chr19 660358 660370 NHLH1 JASPAR yes 111969516
chr19 660359 660369 NHLH1 JASPAR yes 70776546
chr19 660359 660369 NHLH1 JASPAR yes 111969517
chr19 660385 660389 LFA1 TRANSFAC yes 70776547
chr19 660385 660389 LFA1 TRANSFAC yes 111969518
chr19 660397 660417 ESR1 JASPAR yes 70776548
chr19 660397 660417 ESR1 JASPAR yes 111969519
chr19 660402 660417 ESR2 JASPAR yes 70776549
chr19 660402 660417 ESR2 JASPAR yes 111969520
chr19 660420 660426 ATF1 TRANSFAC yes 70776550
chr19 660420 660426 ATF1 TRANSFAC yes 111969521
chr19 660456 660466 ID4 JASPAR yes 70776551
chr19 660456 660466 ID4 JASPAR yes 111969522
chr19 660481 660486 SP1 TRANSFAC yes 70776552
chr19 660481 660486 SP1 TRANSFAC yes 111969523
chr19 660481 660487 SP1 TRANSFAC yes 70776553
chr19 660481 660487 SP1 TRANSFAC yes 111969524
chr19 660486 660497 FOS JASPAR yes 70776554
chr19 660486 660497 FOSL1 JASPAR yes 70776555
chr19 660486 660497 JUND JASPAR yes 70776556
chr19 660486 660497 FOS JASPAR yes 111969525
chr19 660486 660497 FOSL1 JASPAR yes 111969526
chr19 660486 660497 JUND JASPAR yes 111969527
chr19 660487 660498 FOSL2 JASPAR yes 70776557
chr19 660487 660498 JUNB JASPAR yes 70776558
chr19 660487 660498 NFE2L2 JASPAR yes 70776559
chr19 660487 660498 FOSL2 JASPAR yes 111969528
chr19 660487 660498 JUNB JASPAR yes 111969529
chr19 660487 660498 NFE2L2 JASPAR yes 111969530
chr19 660487 660501 JUN JASPAR yes 70776560
chr19 660487 660501 JUN JASPAR yes 111969531
chr19 660492 660511 REST JASPAR yes 70776561
chr19 660492 660511 REST JASPAR yes 111969532
chr19 660494 660506 TFAP2A JASPAR yes 70776562
chr19 660494 660506 TFAP2B JASPAR yes 70776563
chr19 660494 660506 TFAP2C JASPAR yes 70776564
chr19 660494 660506 TFAP2A JASPAR yes 111969533
chr19 660494 660506 TFAP2B JASPAR yes 111969534
chr19 660494 660506 TFAP2C JASPAR yes 111969535
chr19 660501 660505 LFA1 TRANSFAC yes 70776565
chr19 660501 660505 LFA1 TRANSFAC yes 111969536
chr19 660509 660515 MZF1 JASPAR yes 70776566
chr19 660509 660515 MZF1 JASPAR yes 111969537
chr19 660523 660538 ZIC3 JASPAR yes 70776567
chr19 660523 660538 ZIC3 JASPAR yes 111969538
chr19 660524 660529 SP1 TRANSFAC yes 70776568
chr19 660524 660529 SP1 TRANSFAC yes 111969539
chr19 660538 660542 LFA1 TRANSFAC yes 70776569
chr19 660538 660542 LFA1 TRANSFAC yes 111969540
chr19 660546 660561 RFX5 JASPAR yes 70776570
chr19 660546 660561 RFX5 JASPAR yes 111969541
chr19 660554 660559 TFAP2A TRANSFAC yes 70776571
chr19 660554 660559 TFAP2A TRANSFAC yes 111969542
chr19 660554 660560 MZF1 JASPAR yes 70776572
chr19 660554 660560 MZF1 JASPAR yes 111969543
chr19 660555 660568 NFKB2 JASPAR yes 70776573
chr19 660555 660568 NFKB2 JASPAR yes 111969544
chr19 660556 660565 NF-kappaB TRANSFAC yes 70776574
chr19 660556 660565 NF-kappaB TRANSFAC yes 111969545
chr19 660556 660566 NFKB1 JASPAR yes 70776575
chr19 660556 660566 RELA JASPAR yes 70776576
chr19 660556 660566 REL JASPAR yes 70776577
chr19 660556 660566 NFKB1 JASPAR yes 111969546
chr19 660556 660566 RELA JASPAR yes 111969547
chr19 660556 660566 REL JASPAR yes 111969548
chr19 660556 660567 NF-kappaB TRANSFAC yes 70776578
chr19 660556 660567 NFKB1 JASPAR yes 70776579
chr19 660556 660567 NF-kappaB TRANSFAC yes 111969549
chr19 660556 660567 NFKB1 JASPAR yes 111969550
chr19 660557 660567 NFKB1 JASPAR yes 70776580
chr19 660557 660567 NFKB1 JASPAR yes 111969551
chr19 660563 660569 MZF1 JASPAR yes 70776581
chr19 660563 660569 MZF1 JASPAR yes 111969552
chr19 660594 660600 MZF1 JASPAR yes 70776582
chr19 660594 660600 MZF1 JASPAR yes 111969553
chr19 660608 660618 ID4 JASPAR yes 70776583
chr19 660608 660618 TCF3 JASPAR yes 70776584
chr19 660608 660618 TCF4 JASPAR yes 70776585
chr19 660608 660618 ID4 JASPAR yes 111969554
chr19 660608 660618 TCF3 JASPAR yes 111969555
chr19 660608 660618 TCF4 JASPAR yes 111969556
chr19 660610 660619 ZEB1 JASPAR yes 70776586
chr19 660610 660619 ZEB1 JASPAR yes 111969557
chr19 660620 660624 YY1 TRANSFAC yes 70776587
chr19 660620 660624 YY1 TRANSFAC yes 111969558
chr19 660620 660635 STAT1 JASPAR yes 70776588
chr19 660620 660635 STAT1 JASPAR yes 111969559
chr19 660622 660633 STAT1 JASPAR yes 70776589
chr19 660622 660633 STAT3 JASPAR yes 70776590
chr19 660622 660633 STAT1 JASPAR yes 111969560
chr19 660622 660633 STAT3 JASPAR yes 111969561
chr19 660627 660643 POU4F2 JASPAR yes 70776591
chr19 660627 660643 POU4F2 JASPAR yes 111969562
chr19 660628 660644 POU4F3 JASPAR yes 70776592
chr19 660628 660644 POU4F3 JASPAR yes 111969563
chr19 660630 660644 POU4F1 JASPAR yes 70776593
chr19 660630 660644 POU4F1 JASPAR yes 111969564
chr19 660632 660638 TBP TRANSFAC yes 70776594
chr19 660632 660638 TBP TRANSFAC yes 111969565
chr19 660636 660650 IRF7 JASPAR yes 70776595
chr19 660636 660650 IRF7 JASPAR yes 111969566
chr19 660700 660721 ZNF263 JASPAR yes 70776596
chr19 660700 660721 ZNF263 JASPAR yes 111969567
chr19 660733 660743 SP1 JASPAR yes 70776597
chr19 660733 660743 SP1 JASPAR yes 111969568
chr19 660735 660756 ZNF263 JASPAR yes 70776598
chr19 660735 660756 ZNF263 JASPAR yes 111969569
chr19 660740 660760 RREB1 JASPAR yes 70776599
chr19 660740 660760 RREB1 JASPAR yes 111969570
chr19 660742 660757 NR2C2 JASPAR yes 70776600
chr19 660742 660757 NR2C2 JASPAR yes 111969571
chr19 660752 660758 SP1 TRANSFAC yes 70776601
chr19 660752 660758 SP1 TRANSFAC yes 111969572
chr19 660781 660801 RREB1 JASPAR yes 70776602
chr19 660781 660801 RREB1 JASPAR yes 111969573
chr19 660786 660802 GLIS1 JASPAR yes 70776603
chr19 660786 660802 GLIS1 JASPAR yes 111969574
chr19 660794 660802 HOXA5 JASPAR yes 70776604
chr19 660794 660802 HOXA5 JASPAR yes 111969575
chr19 660796 660804 BARX1 JASPAR yes 70776605
chr19 660796 660804 BARX1 JASPAR yes 111969576
chr19 660796 660805 VENTX JASPAR yes 70776606
chr19 660796 660805 VENTX JASPAR yes 111969577
chr19 660797 660808 PHOX2A JASPAR yes 70776607
chr19 660797 660808 PROP1 JASPAR yes 70776608
chr19 660797 660808 PHOX2A JASPAR yes 111969578
chr19 660797 660808 PROP1 JASPAR yes 111969579
chr19 660799 660808 SRY JASPAR yes 70776609
chr19 660799 660808 SRY JASPAR yes 111969580
SNP sites on vista28096[chr19:660293-660821]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 660448 rs116119469 G A
EBF1
5366002
chr19 660455 rs545887235 A G
EBF1
5366003
chr19 660473 rs564189987 G A
EBF1
5366004
chr19 660487 rs10601849 CCT C
EBF1 FOS FOSL1 FOSL2 JUN JUNB JUND NFE2L2 SP1
5366005
chr19 660596 rs116322418 C G
EBF1 MZF1
5366006
chr19 660657 rs3787007 G A
EBF1
5366007
chr19 660706 rs151004072 C G
ZNF263
5366008
chr19 660734 rs191863871 C T
SP1
5366009
chr19 660779 rs79609574 G A no 5366010
Genes possibly regulated by vista28096[chr19:660293-660821]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 571297 583493 + BSG ENSG00000172270.14 571297 0.64 1.0 16707 11004
chr19 589893 617159 + HCN2 ENSG00000099822.2 589893 0.94 0.98 16708 29600
chr19 617223 633597 - POLRMT ENSG00000099821.9 633597 0.61 1.0 16709 73304
chr19 639879 643703 + FGF22 ENSG00000070388.7 639879 0.92 1.0 16710 79586
chr19 647526 663277 - RNF126 ENSG00000070423.13 663277 0.58 1.0 16711 97544
chr19 676392 683385 + FSTL3 ENSG00000070404.5 676392 0.76 0.99 16712 84429
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 65361
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 51868
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 9695
Expression level of Genes
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miRNAs possibly regulated by vista28096[chr19:660293-660821]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results