EnhancerDB
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  3. vista28099[chr19:675402-675838]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28099[chr19:675402-675838]
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Tissue distribution of vista28099
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Transcription factor that possibly regulate vista28099[chr19:675402-675838]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 675552 678270 POLR2A UCSC Txn Factor no Conserved 108345698
chr19 675434 675442 FEV JASPAR yes 70776711
chr19 675434 675442 FEV JASPAR yes 111969622
chr19 675442 675455 SMAD2 JASPAR yes 70776712
chr19 675442 675455 SMAD2 JASPAR yes 111969623
chr19 675460 675473 TFAP2B JASPAR yes 70776713
chr19 675460 675473 TFAP2C JASPAR yes 70776714
chr19 675460 675473 TFAP2B JASPAR yes 111969624
chr19 675460 675473 TFAP2C JASPAR yes 111969625
chr19 675461 675473 TFAP2A JASPAR yes 70776715
chr19 675461 675473 TFAP2B JASPAR yes 70776716
chr19 675461 675473 TFAP2C JASPAR yes 70776717
chr19 675461 675473 TFAP2A JASPAR yes 111969626
chr19 675461 675473 TFAP2B JASPAR yes 111969627
chr19 675461 675473 TFAP2C JASPAR yes 111969628
chr19 675463 675472 TFAP2A JASPAR yes 70776718
chr19 675463 675472 TFAP2A JASPAR yes 111969629
chr19 675474 675489 TFAP2C JASPAR yes 70776719
chr19 675474 675489 TFAP2C JASPAR yes 111969630
chr19 675476 675488 TFAP2A JASPAR yes 70776720
chr19 675476 675488 TFAP2A JASPAR yes 111969631
chr19 675500 675508 MEIS2 JASPAR yes 70776721
chr19 675500 675508 MEIS3 JASPAR yes 70776722
chr19 675500 675508 MEIS2 JASPAR yes 111969632
chr19 675500 675508 MEIS3 JASPAR yes 111969633
chr19 675501 675505 NFE TRANSFAC yes 70776723
chr19 675501 675505 NFE TRANSFAC yes 111969634
chr19 675530 675538 FOXO3 JASPAR yes 70776724
chr19 675530 675538 FOXO3 JASPAR yes 111969635
chr19 675537 675555 MAFF JASPAR yes 70776725
chr19 675537 675555 MAFF JASPAR yes 111969636
chr19 675539 675550 FOXA1 JASPAR yes 70776726
chr19 675539 675550 FOXA1 JASPAR yes 111969637
chr19 675539 675554 MAFK JASPAR yes 70776727
chr19 675539 675554 MAFK JASPAR yes 111969638
chr19 675553 675564 E2F6 JASPAR yes 70776728
chr19 675553 675564 E2F6 JASPAR yes 111969639
chr19 675560 675567 SPIB JASPAR yes 70776729
chr19 675560 675567 SPIB JASPAR yes 111969640
chr19 675571 675581 HMBOX1 JASPAR yes 70776730
chr19 675571 675581 HMBOX1 JASPAR yes 111969641
chr19 675573 675584 FOXP2 JASPAR yes 70776731
chr19 675573 675584 FOXP2 JASPAR yes 111969642
chr19 675575 675582 FOXD2 JASPAR yes 70776732
chr19 675575 675582 FOXI1 JASPAR yes 70776733
chr19 675575 675582 FOXL1 JASPAR yes 70776734
chr19 675575 675582 FOXO4 JASPAR yes 70776735
chr19 675575 675582 FOXO6 JASPAR yes 70776736
chr19 675575 675582 FOXP3 JASPAR yes 70776737
chr19 675575 675582 FOXD2 JASPAR yes 111969643
chr19 675575 675582 FOXI1 JASPAR yes 111969644
chr19 675575 675582 FOXL1 JASPAR yes 111969645
chr19 675575 675582 FOXO4 JASPAR yes 111969646
chr19 675575 675582 FOXO6 JASPAR yes 111969647
chr19 675575 675582 FOXP3 JASPAR yes 111969648
chr19 675575 675583 FOXD1 JASPAR yes 70776738
chr19 675575 675583 FOXG1 JASPAR yes 70776739
chr19 675575 675583 FOXO3 JASPAR yes 70776740
chr19 675575 675583 FOXD1 JASPAR yes 111969649
chr19 675575 675583 FOXG1 JASPAR yes 111969650
chr19 675575 675583 FOXO3 JASPAR yes 111969651
chr19 675578 675590 TEAD1 JASPAR yes 70776741
chr19 675578 675590 TEAD1 JASPAR yes 111969652
chr19 675603 675617 MTF1 JASPAR yes 70776742
chr19 675603 675617 MTF1 JASPAR yes 111969653
chr19 675611 675617 TCF4 TRANSFAC yes 70776743
chr19 675611 675617 TCF4 TRANSFAC yes 111969654
chr19 675623 675637 PLAG1 JASPAR yes 70776744
chr19 675623 675637 PLAG1 JASPAR yes 111969655
chr19 675634 675638 LFA1 TRANSFAC yes 70776745
chr19 675634 675638 LFA1 TRANSFAC yes 111969656
chr19 675643 675655 TFAP2C JASPAR yes 70776746
chr19 675643 675655 TFAP2C JASPAR yes 111969657
chr19 675643 675658 TFAP2A JASPAR yes 70776747
chr19 675643 675658 TFAP2C JASPAR yes 70776748
chr19 675643 675658 TFAP2A JASPAR yes 111969658
chr19 675643 675658 TFAP2C JASPAR yes 111969659
chr19 675649 675654 SP1 TRANSFAC yes 70776749
chr19 675649 675654 SP1 TRANSFAC yes 111969660
chr19 675653 675674 REST JASPAR yes 70776750
chr19 675653 675674 REST JASPAR yes 111969661
chr19 675654 675669 HNF4G JASPAR yes 70776751
chr19 675654 675669 NR2C2 JASPAR yes 70776752
chr19 675654 675669 HNF4G JASPAR yes 111969662
chr19 675654 675669 NR2C2 JASPAR yes 111969663
chr19 675655 675670 HNF4A JASPAR yes 70776753
chr19 675655 675670 HNF4A JASPAR yes 111969664
chr19 675659 675665 SOX10 JASPAR yes 70776754
chr19 675659 675665 SOX10 JASPAR yes 111969665
chr19 675677 675697 RREB1 JASPAR yes 70776755
chr19 675677 675697 RREB1 JASPAR yes 111969666
chr19 675679 675699 RREB1 JASPAR yes 70776756
chr19 675679 675699 RREB1 JASPAR yes 111969667
chr19 675681 675701 RREB1 JASPAR yes 70776757
chr19 675681 675701 RREB1 JASPAR yes 111969668
chr19 675683 675703 RREB1 JASPAR yes 70776758
chr19 675683 675703 RREB1 JASPAR yes 111969669
chr19 675685 675705 RREB1 JASPAR yes 70776759
chr19 675685 675705 RREB1 JASPAR yes 111969670
chr19 675687 675707 RREB1 JASPAR yes 70776760
chr19 675687 675707 RREB1 JASPAR yes 111969671
chr19 675689 675709 RREB1 JASPAR yes 70776761
chr19 675689 675709 RREB1 JASPAR yes 111969672
chr19 675691 675711 RREB1 JASPAR yes 70776762
chr19 675691 675711 RREB1 JASPAR yes 111969673
chr19 675697 675717 RREB1 JASPAR yes 70776763
chr19 675697 675717 RREB1 JASPAR yes 111969674
chr19 675716 675731 TFAP2A JASPAR yes 70776764
chr19 675716 675731 TFAP2A JASPAR yes 111969675
chr19 675717 675731 EBF1 JASPAR yes 70776765
chr19 675717 675731 GLIS2 JASPAR yes 70776766
chr19 675717 675731 EBF1 JASPAR yes 111969676
chr19 675717 675731 GLIS2 JASPAR yes 111969677
chr19 675718 675733 TFAP2C JASPAR yes 70776767
chr19 675718 675733 TFAP2C JASPAR yes 111969678
chr19 675719 675730 EBF1 JASPAR yes 70776768
chr19 675719 675730 EBF1 JASPAR yes 111969679
chr19 675725 675730 SP1 TRANSFAC yes 70776769
chr19 675725 675730 SP1 TRANSFAC yes 111969680
chr19 675748 675769 REST JASPAR yes 70776770
chr19 675748 675769 REST JASPAR yes 111969681
chr19 675788 675792 NFE TRANSFAC yes 70776771
chr19 675788 675792 NFE TRANSFAC yes 111969682
chr19 675809 675813 NFE TRANSFAC yes 70776772
chr19 675809 675813 NFE TRANSFAC yes 111969683
chr19 675813 675833 RREB1 JASPAR yes 70776773
chr19 675813 675833 RREB1 JASPAR yes 111969684
chr19 675814 675834 RREB1 JASPAR yes 70776774
chr19 675814 675834 RREB1 JASPAR yes 111969685
chr19 675816 675836 RREB1 JASPAR yes 70776775
chr19 675816 675836 RREB1 JASPAR yes 111969686
chr19 675817 675837 RREB1 JASPAR yes 70776776
chr19 675817 675837 RREB1 JASPAR yes 111969687
chr19 675828 675834 MZF1 JASPAR yes 70776777
chr19 675828 675834 MZF1 JASPAR yes 111969688
chr19 675829 675839 SP1 JASPAR yes 70776778
chr19 675829 675839 SP1 JASPAR yes 111969689
SNP sites on vista28099[chr19:675402-675838]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 675477 rs185938024 C T
TFAP2A TFAP2C
5366259
chr19 675513 rs2301742 T G no 5366260
chr19 675648 rs147632142 CA C
POLR2A TFAP2A TFAP2C
5366261
chr19 675673 rs559061170 G A
POLR2A REST
5366262
chr19 675677 rs563691197 G A
POLR2A RREB1
5366263
chr19 675681 rs35083191 G A
POLR2A RREB1
5366264
chr19 675748 rs139223124 T A
POLR2A REST
5366265
chr19 675799 rs529441538 C T
POLR2A
5366266
chr19 675827 rs73918176 A T
POLR2A RREB1
5366267
chr19 675835 rs181033909 C T
POLR2A RREB1 SP1
5366268
Genes possibly regulated by vista28099[chr19:675402-675838]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 589893 617159 + HCN2 ENSG00000099822.2 589893 0.94 0.98 16708 14491
chr19 617223 633597 - POLRMT ENSG00000099821.9 633597 0.61 1.0 16709 58195
chr19 639879 643703 + FGF22 ENSG00000070388.7 639879 0.92 1.0 16710 64477
chr19 647526 663277 - RNF126 ENSG00000070423.13 663277 0.58 1.0 16711 87875
chr19 676392 683385 + FSTL3 ENSG00000070404.5 676392 0.76 0.99 16712 99446
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 80378
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 66885
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 24712
Expression level of Genes
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miRNAs possibly regulated by vista28099[chr19:675402-675838]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results