EnhancerDB
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  3. vista28100[chr19:678997-679265]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28100[chr19:678997-679265]
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Tissue distribution of vista28100
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Transcription factor that possibly regulate vista28100[chr19:678997-679265]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 679034 679043 PITX3 JASPAR yes 70776779
chr19 679034 679043 PITX3 JASPAR yes 111970222
chr19 679034 679044 GSC2 JASPAR yes 70776780
chr19 679034 679044 GSC JASPAR yes 70776781
chr19 679034 679044 GSC2 JASPAR yes 111970223
chr19 679034 679044 GSC JASPAR yes 111970224
chr19 679035 679043 OTX1 JASPAR yes 70776782
chr19 679035 679043 OTX2 JASPAR yes 70776783
chr19 679035 679043 RHOXF1 JASPAR yes 70776784
chr19 679035 679043 OTX1 JASPAR yes 111970225
chr19 679035 679043 OTX2 JASPAR yes 111970226
chr19 679035 679043 RHOXF1 JASPAR yes 111970227
chr19 679038 679058 ESR1 JASPAR yes 70776785
chr19 679038 679058 ESR1 JASPAR yes 111970228
chr19 679055 679067 GLI2 JASPAR yes 70776786
chr19 679055 679067 ZBTB7B JASPAR yes 70776787
chr19 679055 679067 ZBTB7C JASPAR yes 70776788
chr19 679055 679067 GLI2 JASPAR yes 111970229
chr19 679055 679067 ZBTB7B JASPAR yes 111970230
chr19 679055 679067 ZBTB7C JASPAR yes 111970231
chr19 679056 679068 ZBTB7A JASPAR yes 70776789
chr19 679056 679068 ZBTB7A JASPAR yes 111970232
chr19 679061 679065 H4TF2 TRANSFAC yes 70776790
chr19 679061 679065 H4TF2 TRANSFAC yes 111970233
chr19 679076 679097 ZNF263 JASPAR yes 70776791
chr19 679076 679097 ZNF263 JASPAR yes 111970234
chr19 679088 679099 E2F6 JASPAR yes 70776792
chr19 679088 679099 E2F6 JASPAR yes 111970235
chr19 679092 679106 PLAG1 JASPAR yes 70776793
chr19 679092 679106 PLAG1 JASPAR yes 111970236
chr19 679099 679113 GLIS2 JASPAR yes 70776794
chr19 679099 679113 GLIS2 JASPAR yes 111970237
chr19 679099 679114 ZIC4 JASPAR yes 70776795
chr19 679099 679114 ZIC4 JASPAR yes 111970238
chr19 679110 679125 STAT1 JASPAR yes 70776796
chr19 679110 679125 STAT1 JASPAR yes 111970239
chr19 679131 679144 SCRT2 JASPAR yes 70776797
chr19 679131 679144 SCRT2 JASPAR yes 111970240
chr19 679144 679159 TP53 JASPAR yes 70776798
chr19 679144 679159 TP53 JASPAR yes 111970241
chr19 679148 679157 HIC2 JASPAR yes 70776799
chr19 679148 679157 HIC2 JASPAR yes 111970242
chr19 679151 679155 LFA1 TRANSFAC yes 70776800
chr19 679151 679155 LFA1 TRANSFAC yes 111970243
chr19 679167 679179 ZBTB7B JASPAR yes 70776801
chr19 679167 679179 ZBTB7B JASPAR yes 111970244
chr19 679169 679179 ZNF740 JASPAR yes 70776802
chr19 679169 679179 ZNF740 JASPAR yes 111970245
chr19 679169 679183 GLIS2 JASPAR yes 70776803
chr19 679169 679183 GLIS3 JASPAR yes 70776804
chr19 679169 679183 GLIS2 JASPAR yes 111970246
chr19 679169 679183 GLIS3 JASPAR yes 111970247
chr19 679170 679190 RREB1 JASPAR yes 70776805
chr19 679170 679190 RREB1 JASPAR yes 111970248
chr19 679171 679191 RREB1 JASPAR yes 70776806
chr19 679171 679191 RREB1 JASPAR yes 111970249
chr19 679172 679193 ZNF263 JASPAR yes 70776807
chr19 679172 679193 ZNF263 JASPAR yes 111970250
chr19 679173 679183 SP1 JASPAR yes 70776808
chr19 679173 679183 SP1 JASPAR yes 111970251
chr19 679175 679185 ZNF740 JASPAR yes 70776809
chr19 679175 679185 ZNF740 JASPAR yes 111970252
chr19 679193 679208 TFAP2C JASPAR yes 70776810
chr19 679193 679208 TFAP2C JASPAR yes 111970253
chr19 679194 679203 TFAP2A JASPAR yes 70776811
chr19 679194 679203 TFAP2A JASPAR yes 111970254
chr19 679194 679205 EBF1 JASPAR yes 70776812
chr19 679194 679205 EBF1 JASPAR yes 111970255
chr19 679198 679203 TFAP2A TRANSFAC yes 70776813
chr19 679198 679203 TFAP2A TRANSFAC yes 111970256
chr19 679198 679204 MZF1 JASPAR yes 70776814
chr19 679198 679204 MZF1 JASPAR yes 111970257
chr19 679205 679219 NR2F1 JASPAR yes 70776815
chr19 679205 679219 NR2F1 JASPAR yes 111970258
chr19 679217 679227 GABPA JASPAR yes 70776816
chr19 679217 679227 GABPA JASPAR yes 111970259
chr19 679219 679225 ETS1 JASPAR yes 70776817
chr19 679219 679225 SPI1 JASPAR yes 70776818
chr19 679219 679225 ETS1 JASPAR yes 111970260
chr19 679219 679225 SPI1 JASPAR yes 111970261
chr19 679257 679261 YY1 TRANSFAC yes 70776819
chr19 679257 679261 YY1 TRANSFAC yes 111970262
chr19 679259 679272 ZBTB18 JASPAR yes 70776820
chr19 679259 679272 ZBTB18 JASPAR yes 111970263
SNP sites on vista28100[chr19:678997-679265]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 679003 rs111247833 G C no 5366318
chr19 679105 rs73506016 C T
GLIS2 PLAG1 ZIC4
5366319
Genes possibly regulated by vista28100[chr19:678997-679265]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 589893 617159 + HCN2 ENSG00000099822.2 589893 0.94 0.98 16708 10896
chr19 617223 633597 - POLRMT ENSG00000099821.9 633597 0.61 1.0 16709 54600
chr19 639879 643703 + FGF22 ENSG00000070388.7 639879 0.92 1.0 16710 60882
chr19 647526 663277 - RNF126 ENSG00000070423.13 663277 0.58 1.0 16711 84280
chr19 676392 683385 + FSTL3 ENSG00000070404.5 676392 0.76 0.99 16712 97395
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 83805
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 70312
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 28139
Expression level of Genes
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miRNAs possibly regulated by vista28100[chr19:678997-679265]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results