EnhancerDB
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  3. vista28105[chr19:753188-753320]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28105[chr19:753188-753320]
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Tissue distribution of vista28105
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Transcription factor that possibly regulate vista28105[chr19:753188-753320]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 752459 753254 POLR2A UCSC Txn Factor no Conserved 108346065
chr19 752459 753254 POLR2A UCSC Txn Factor no Conserved 108346066
chr19 752489 753438 EP300 UCSC Txn Factor no Conserved 108346092
chr19 752489 753438 EP300 UCSC Txn Factor no Conserved 108346093
chr19 752494 753352 TCF12 UCSC Txn Factor no Conserved 108346099
chr19 752494 753352 TCF12 UCSC Txn Factor no Conserved 108346100
chr19 752666 753339 TFAP2C UCSC Txn Factor no Conserved 108346277
chr19 752666 753339 TFAP2C UCSC Txn Factor no Conserved 108346278
chr19 752686 753363 TFAP2A UCSC Txn Factor no Conserved 108346290
chr19 752686 753363 TFAP2A UCSC Txn Factor no Conserved 108346291
chr19 753143 753405 CEBPB UCSC Txn Factor no Conserved 108346349
chr19 753176 753188 NHLH1 JASPAR yes 70777065
chr19 753176 753188 NHLH1 JASPAR yes 111973597
chr19 753180 753192 FOXI1 JASPAR yes 70777066
chr19 753180 753192 FOXI1 JASPAR yes 111973601
chr19 753204 753208 H1TF2 TRANSFAC yes 70777067
chr19 753204 753208 NFE TRANSFAC yes 70777068
chr19 753204 753208 SRF TRANSFAC yes 70777069
chr19 753204 753208 H1TF2 TRANSFAC yes 111973602
chr19 753204 753208 NFE TRANSFAC yes 111973603
chr19 753204 753208 SRF TRANSFAC yes 111973604
chr19 753234 753238 YY1 TRANSFAC yes 70777070
chr19 753234 753238 YY1 TRANSFAC yes 111973605
chr19 753249 753253 YY1 TRANSFAC yes 70777071
chr19 753249 753253 YY1 TRANSFAC yes 111973606
chr19 753262 753268 ETS1 JASPAR yes 70777072
chr19 753262 753268 SPI1 JASPAR yes 70777073
chr19 753262 753268 ETS1 JASPAR yes 111973607
chr19 753262 753268 SPI1 JASPAR yes 111973608
chr19 753273 753282 JDP2 JASPAR yes 70777074
chr19 753273 753282 JDP2 JASPAR yes 111973609
chr19 753291 753305 MTF1 JASPAR yes 70777075
chr19 753291 753305 MTF1 JASPAR yes 111973610
chr19 753303 753309 MZF1 JASPAR yes 70777076
chr19 753303 753309 MZF1 JASPAR yes 111973611
SNP sites on vista28105[chr19:753188-753320]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 753212 rs141672952 C T
CEBPB EP300 POLR2A TCF12 TFAP2A TFAP2C
5367099
chr19 753264 rs76345093 G A
CEBPB EP300 ETS1 SPI1 TCF12 TFAP2A TFAP2C
5367100
chr19 753300 rs533850851 C T
CEBPB EP300 MTF1 TCF12 TFAP2A TFAP2C
5367101
chr19 753319 rs554521305 C A,T
CEBPB EP300 TCF12 TFAP2A TFAP2C
5367102
Genes possibly regulated by vista28105[chr19:753188-753320]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 647526 663277 - RNF126 ENSG00000070423.13 663277 0.58 1.0 16711 10089
chr19 676392 683385 + FSTL3 ENSG00000070404.5 676392 0.76 0.99 16712 23204
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 42272
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 55765
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 97938
chr19 797075 812327 + PTBP1 ENSG00000011304.12 797075 0.67 1.0 16716 56245
chr19 812518 821967 - LPPR3 ENSG00000129951.14 821967 0.95 0.95 16717 31353
chr19 825097 832017 + AZU1 ENSG00000172232.5 825097 0.94 0.92 16718 28223
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 12357
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 2306
Expression level of Genes
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miRNAs possibly regulated by vista28105[chr19:753188-753320]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 804977 804999 + hsa-miR-4745-3p MIMAT0019879 797451 0.0006792401566780628 0.868225 0.0 795
Expression level of miRNAs
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