EnhancerDB
  1. Home
  2. Enhancers
  3. vista28106[chr19:778993-779222]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28106[chr19:778993-779222]
Back to top
Tissue distribution of vista28106
Back to top
Transcription factor that possibly regulate vista28106[chr19:778993-779222]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 778934 779294 MYC UCSC Txn Factor no Conserved 108346457
chr19 778953 779303 MAX UCSC Txn Factor no Conserved 108346465
chr19 778962 779233 CEBPB UCSC Txn Factor no Conserved 108346471
chr19 778999 779004 ETS2 TRANSFAC yes 70777077
chr19 778999 779004 ETS2 TRANSFAC yes 111976064
chr19 779000 779015 HSF1 JASPAR yes 70777078
chr19 779000 779015 HSF1 JASPAR yes 111976065
chr19 779017 779031 RORA JASPAR yes 70777079
chr19 779017 779031 RORA JASPAR yes 111976066
chr19 779025 779029 LFA1 TRANSFAC yes 70777080
chr19 779025 779029 LFA1 TRANSFAC yes 111976067
chr19 779047 779057 NFATC3 JASPAR yes 70777081
chr19 779047 779057 NFATC3 JASPAR yes 111976068
chr19 779048 779055 NFATC2 JASPAR yes 70777082
chr19 779048 779055 NFATC2 JASPAR yes 111976069
chr19 779059 779068 ELK4 JASPAR yes 70777083
chr19 779059 779068 ELK4 JASPAR yes 111976070
chr19 779070 779085 HSF1 JASPAR yes 70777084
chr19 779070 779085 HSF1 JASPAR yes 111976071
chr19 779104 779115 CEBPB JASPAR yes 70777085
chr19 779104 779115 CEBPB JASPAR yes 111976072
chr19 779105 779115 CEBPB JASPAR yes 70777086
chr19 779105 779115 CEBPE JASPAR yes 70777087
chr19 779105 779115 CEBPG JASPAR yes 70777088
chr19 779105 779115 CEBPB JASPAR yes 111976073
chr19 779105 779115 CEBPE JASPAR yes 111976074
chr19 779105 779115 CEBPG JASPAR yes 111976075
chr19 779105 779116 CEBPA JASPAR yes 70777089
chr19 779105 779116 CEBPA JASPAR yes 111976076
chr19 779110 779114 H1TF2 TRANSFAC yes 70777090
chr19 779110 779114 NFE TRANSFAC yes 70777091
chr19 779110 779114 SRF TRANSFAC yes 70777092
chr19 779110 779114 H1TF2 TRANSFAC yes 111976077
chr19 779110 779114 NFE TRANSFAC yes 111976078
chr19 779110 779114 SRF TRANSFAC yes 111976079
chr19 779115 779128 TFAP2A JASPAR yes 70777093
chr19 779115 779128 TFAP2B JASPAR yes 70777094
chr19 779115 779128 TFAP2C JASPAR yes 70777095
chr19 779115 779128 TFAP2A JASPAR yes 111976080
chr19 779115 779128 TFAP2B JASPAR yes 111976081
chr19 779115 779128 TFAP2C JASPAR yes 111976082
chr19 779123 779127 LFA1 TRANSFAC yes 70777096
chr19 779123 779127 LFA1 TRANSFAC yes 111976083
chr19 779123 779133 MAX JASPAR yes 70777097
chr19 779123 779133 MAX JASPAR yes 111976084
chr19 779123 779134 USF2 JASPAR yes 70777098
chr19 779123 779134 USF2 JASPAR yes 111976085
SNP sites on vista28106[chr19:778993-779222]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 779211 rs115652616 G A
CEBPB MAX MYC
5367512
Genes possibly regulated by vista28106[chr19:778993-779222]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 16467
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 29960
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 72133
chr19 797075 812327 + PTBP1 ENSG00000011304.12 797075 0.67 1.0 16716 82147
chr19 812518 821967 - LPPR3 ENSG00000129951.14 821967 0.95 0.95 16717 57255
chr19 825097 832017 + AZU1 ENSG00000172232.5 825097 0.94 0.92 16718 54125
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 38259
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 28208
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 19769
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28106[chr19:778993-779222]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 804977 804999 + hsa-miR-4745-3p MIMAT0019879 797451 0.0016380910778639292 0.868225 0.0 795
Expression level of miRNAs
Back to top