EnhancerDB
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  3. vista28108[chr19:789308-789721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28108[chr19:789308-789721]
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Tissue distribution of vista28108
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Transcription factor that possibly regulate vista28108[chr19:789308-789721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 789287 789308 ZNF263 JASPAR yes 70777200
chr19 789287 789308 ZNF263 JASPAR yes 111977473
chr19 789288 789309 ZNF263 JASPAR yes 70777201
chr19 789288 789309 ZNF263 JASPAR yes 111977474
chr19 789310 789316 NFE2 TRANSFAC yes 70777202
chr19 789310 789316 NFE2 TRANSFAC yes 111977478
chr19 789311 789323 TFAP2A JASPAR yes 70777203
chr19 789311 789323 TFAP2B JASPAR yes 70777204
chr19 789311 789323 TFAP2C JASPAR yes 70777205
chr19 789311 789323 TFAP2A JASPAR yes 111977479
chr19 789311 789323 TFAP2B JASPAR yes 111977480
chr19 789311 789323 TFAP2C JASPAR yes 111977481
chr19 789364 789376 PKNOX1 JASPAR yes 70777206
chr19 789364 789376 TGIF2 JASPAR yes 70777207
chr19 789364 789376 PKNOX1 JASPAR yes 111977482
chr19 789364 789376 TGIF2 JASPAR yes 111977483
chr19 789369 789377 MEIS3 JASPAR yes 70777208
chr19 789369 789377 MEIS3 JASPAR yes 111977484
chr19 789370 789374 NFE TRANSFAC yes 70777209
chr19 789370 789374 NFE TRANSFAC yes 111977485
chr19 789384 789393 HIC2 JASPAR yes 70777210
chr19 789384 789393 HIC2 JASPAR yes 111977486
chr19 789386 789393 SP1 TRANSFAC yes 70777211
chr19 789386 789393 SP1 TRANSFAC yes 111977487
chr19 789388 789393 SP1 TRANSFAC yes 70777212
chr19 789388 789393 SP1 TRANSFAC yes 111977488
chr19 789392 789407 JUND JASPAR yes 70777213
chr19 789392 789407 JUND JASPAR yes 111977489
chr19 789393 789406 JUN JASPAR yes 70777214
chr19 789393 789406 JUN JASPAR yes 111977490
chr19 789395 789410 JUND JASPAR yes 70777215
chr19 789395 789410 JUND JASPAR yes 111977491
chr19 789408 789411 MYB TRANSFAC yes 70777216
chr19 789408 789411 MYB TRANSFAC yes 111977492
chr19 789408 789418 PAX3 JASPAR yes 70777217
chr19 789408 789418 PAX7 JASPAR yes 70777218
chr19 789408 789418 PAX3 JASPAR yes 111977493
chr19 789408 789418 PAX7 JASPAR yes 111977494
chr19 789409 789419 POU6F2 JASPAR yes 70777219
chr19 789409 789419 POU6F2 JASPAR yes 111977495
chr19 789410 789420 ALX3 JASPAR yes 70777220
chr19 789410 789420 EMX1 JASPAR yes 70777221
chr19 789410 789420 EMX2 JASPAR yes 70777222
chr19 789410 789420 ESX1 JASPAR yes 70777223
chr19 789410 789420 GBX1 JASPAR yes 70777224
chr19 789410 789420 GSX1 JASPAR yes 70777225
chr19 789410 789420 GSX2 JASPAR yes 70777226
chr19 789410 789420 HOXA2 JASPAR yes 70777227
chr19 789410 789420 HOXB2 JASPAR yes 70777228
chr19 789410 789420 LHX2 JASPAR yes 70777229
chr19 789410 789420 LHX6 JASPAR yes 70777230
chr19 789410 789420 MEOX1 JASPAR yes 70777231
chr19 789410 789420 NOTO JASPAR yes 70777232
chr19 789410 789420 ALX3 JASPAR yes 111977496
chr19 789410 789420 EMX1 JASPAR yes 111977497
chr19 789410 789420 EMX2 JASPAR yes 111977498
chr19 789410 789420 ESX1 JASPAR yes 111977499
chr19 789410 789420 GBX1 JASPAR yes 111977500
chr19 789410 789420 GSX1 JASPAR yes 111977501
chr19 789410 789420 GSX2 JASPAR yes 111977502
chr19 789410 789420 HOXA2 JASPAR yes 111977503
chr19 789410 789420 HOXB2 JASPAR yes 111977504
chr19 789410 789420 LHX2 JASPAR yes 111977505
chr19 789410 789420 LHX6 JASPAR yes 111977506
chr19 789410 789420 MEOX1 JASPAR yes 111977507
chr19 789410 789420 NOTO JASPAR yes 111977508
chr19 789411 789419 DLX6 JASPAR yes 70777233
chr19 789411 789419 EN1 JASPAR yes 70777234
chr19 789411 789419 LBX1 JASPAR yes 70777235
chr19 789411 789419 PAX4 JASPAR yes 70777236
chr19 789411 789419 PDX1 JASPAR yes 70777237
chr19 789411 789419 VAX1 JASPAR yes 70777238
chr19 789411 789419 VAX2 JASPAR yes 70777239
chr19 789411 789419 VSX1 JASPAR yes 70777240
chr19 789411 789419 VSX2 JASPAR yes 70777241
chr19 789411 789419 DLX6 JASPAR yes 111977509
chr19 789411 789419 EN1 JASPAR yes 111977510
chr19 789411 789419 LBX1 JASPAR yes 111977511
chr19 789411 789419 PAX4 JASPAR yes 111977512
chr19 789411 789419 PDX1 JASPAR yes 111977513
chr19 789411 789419 VAX1 JASPAR yes 111977514
chr19 789411 789419 VAX2 JASPAR yes 111977515
chr19 789411 789419 VSX1 JASPAR yes 111977516
chr19 789411 789419 VSX2 JASPAR yes 111977517
chr19 789412 789423 PHOX2A JASPAR yes 70777242
chr19 789412 789423 PHOX2A JASPAR yes 111977518
chr19 789433 789437 YY1 TRANSFAC yes 70777243
chr19 789433 789437 YY1 TRANSFAC yes 111977519
chr19 789435 789453 SRF JASPAR yes 70777244
chr19 789435 789453 SRF JASPAR yes 111977520
chr19 789436 789448 SRF JASPAR yes 70777245
chr19 789436 789448 SRF JASPAR yes 111977521
chr19 789446 789450 H4TF2 TRANSFAC yes 70777246
chr19 789446 789450 H4TF2 TRANSFAC yes 111977522
chr19 789451 789455 YY1 TRANSFAC yes 70777247
chr19 789451 789455 YY1 TRANSFAC yes 111977523
chr19 789497 789517 RREB1 JASPAR yes 70777248
chr19 789497 789517 RREB1 JASPAR yes 111977524
chr19 789503 789513 SREBF2 JASPAR yes 70777249
chr19 789503 789513 SREBF2 JASPAR yes 111977525
chr19 789506 789516 SP1 JASPAR yes 70777250
chr19 789506 789516 SP1 JASPAR yes 111977526
chr19 789527 789533 SOX10 JASPAR yes 70777251
chr19 789527 789533 SOX10 JASPAR yes 111977527
chr19 789536 789551 NR2C2 JASPAR yes 70777252
chr19 789536 789551 NR2C2 JASPAR yes 111977528
chr19 789539 789549 SP1 JASPAR yes 70777253
chr19 789539 789549 SP1 JASPAR yes 111977529
chr19 789542 789552 MZF1 JASPAR yes 70777254
chr19 789542 789552 MZF1 JASPAR yes 111977530
chr19 789570 789590 ESR1 JASPAR yes 70777255
chr19 789570 789590 ESR1 JASPAR yes 111977531
chr19 789574 789592 ESR1 JASPAR yes 70777256
chr19 789574 789592 ESR2 JASPAR yes 70777257
chr19 789574 789592 ESR1 JASPAR yes 111977532
chr19 789574 789592 ESR2 JASPAR yes 111977533
chr19 789575 789590 ESR2 JASPAR yes 70777258
chr19 789575 789590 ESR2 JASPAR yes 111977534
chr19 789578 789586 EHF JASPAR yes 70777259
chr19 789578 789586 EHF JASPAR yes 111977535
chr19 789584 789601 RARA JASPAR yes 70777260
chr19 789584 789601 RARA JASPAR yes 111977536
chr19 789596 789607 FLI1 JASPAR yes 70777261
chr19 789596 789607 FLI1 JASPAR yes 111977537
chr19 789597 789610 ELF1 JASPAR yes 70777262
chr19 789597 789610 ELF1 JASPAR yes 111977538
chr19 789598 789606 EHF JASPAR yes 70777263
chr19 789598 789606 EHF JASPAR yes 111977539
chr19 789625 789636 FLI1 JASPAR yes 70777264
chr19 789625 789636 FLI1 JASPAR yes 111977540
chr19 789664 789668 NFE TRANSFAC yes 70777265
chr19 789664 789668 NFE TRANSFAC yes 111977541
chr19 789671 789684 SCRT2 JASPAR yes 70777266
chr19 789671 789684 SCRT2 JASPAR yes 111977542
chr19 789673 789679 PTF TRANSFAC yes 70777267
chr19 789673 789679 PTF TRANSFAC yes 111977543
chr19 789696 789708 INSM1 JASPAR yes 70777268
chr19 789696 789708 INSM1 JASPAR yes 111977544
chr19 789710 789713 MYB TRANSFAC yes 70777269
chr19 789710 789713 MYB TRANSFAC yes 111977545
SNP sites on vista28108[chr19:789308-789721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 789326 rs351968 C A,G no 5367769
chr19 789369 rs113917923 G A
MEIS3 PKNOX1 TGIF2
5367770
chr19 789381 rs10420069 G A no 5367771
chr19 789454 rs10405462 T C
YY1
5367772
chr19 789494 rs142041993 G A no 5367773
chr19 789516 rs374978241 C T
RREB1 SP1
5367774
chr19 789594 rs373886245 C CG
RARA
5367775
chr19 789594 rs552495472 C CG
RARA
5367776
chr19 789631 rs568331751 T A,C
FLI1
5367777
Genes possibly regulated by vista28108[chr19:789308-789721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 685521 695460 - PRSS57 ENSG00000185198.7 695460 0.97 0.99 16713 6152
chr19 708953 748329 + PALM ENSG00000099864.13 708953 0.78 1.0 16714 19645
chr19 751126 764319 + MISP ENSG00000099812.6 751126 0.95 1.0 16715 61818
chr19 797075 812327 + PTBP1 ENSG00000011304.12 797075 0.67 1.0 16716 92646
chr19 812518 821967 - LPPR3 ENSG00000129951.14 821967 0.95 0.95 16717 67754
chr19 825097 832017 + AZU1 ENSG00000172232.5 825097 0.94 0.92 16718 64624
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 48758
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 38707
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 30268
Expression level of Genes
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miRNAs possibly regulated by vista28108[chr19:789308-789721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 804977 804999 + hsa-miR-4745-3p MIMAT0019879 797451 0.0037941064879220944 0.868225 0.0 795
Expression level of miRNAs
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