EnhancerDB
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  3. vista28114[chr19:867005-867400]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28114[chr19:867005-867400]
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Tissue distribution of vista28114
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Transcription factor that possibly regulate vista28114[chr19:867005-867400]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 867003 867013 MAX JASPAR yes 70777462
chr19 867003 867013 MAX JASPAR yes 111980362
chr19 867039 867044 SP1 TRANSFAC yes 70777463
chr19 867039 867044 SP1 TRANSFAC yes 111980363
chr19 867039 867045 SP1 TRANSFAC yes 70777464
chr19 867039 867045 SP1 TRANSFAC yes 111980364
chr19 867039 867046 SP1 TRANSFAC yes 70777465
chr19 867039 867046 SP1 TRANSFAC yes 111980365
chr19 867040 867052 INSM1 JASPAR yes 70777466
chr19 867040 867052 INSM1 JASPAR yes 111980366
chr19 867042 867062 RREB1 JASPAR yes 70777467
chr19 867042 867062 RREB1 JASPAR yes 111980367
chr19 867059 867076 NR3C1 JASPAR yes 70777468
chr19 867059 867076 NR3C2 JASPAR yes 70777469
chr19 867059 867076 NR3C1 JASPAR yes 111980368
chr19 867059 867076 NR3C2 JASPAR yes 111980369
chr19 867061 867076 AR JASPAR yes 70777470
chr19 867061 867076 AR JASPAR yes 111980370
chr19 867073 867077 NFE TRANSFAC yes 70777471
chr19 867073 867077 NFE TRANSFAC yes 111980371
chr19 867073 867086 SMAD2 JASPAR yes 70777472
chr19 867073 867086 SMAD2 JASPAR yes 111980372
chr19 867077 867081 NFE TRANSFAC yes 70777473
chr19 867077 867081 NFE TRANSFAC yes 111980373
chr19 867104 867110 ZNF354C JASPAR yes 70777474
chr19 867104 867110 ZNF354C JASPAR yes 111980374
chr19 867136 867156 PPARG JASPAR yes 70777475
chr19 867136 867156 PPARG JASPAR yes 111980375
chr19 867171 867192 ZNF263 JASPAR yes 70777476
chr19 867171 867192 ZNF263 JASPAR yes 111980376
chr19 867189 867194 SP1 TRANSFAC yes 70777477
chr19 867189 867194 SP1 TRANSFAC yes 111980377
chr19 867189 867196 SP1 TRANSFAC yes 70777478
chr19 867189 867196 SP1 TRANSFAC yes 111980378
chr19 867196 867217 REST JASPAR yes 70777479
chr19 867196 867217 REST JASPAR yes 111980379
chr19 867197 867216 REST JASPAR yes 70777480
chr19 867197 867216 REST JASPAR yes 111980380
chr19 867201 867213 TFAP2B JASPAR yes 70777481
chr19 867201 867213 TFAP2B JASPAR yes 111980381
chr19 867202 867211 TFAP2A JASPAR yes 70777482
chr19 867202 867211 TFAP2A JASPAR yes 111980382
chr19 867207 867220 NFKB2 JASPAR yes 70777483
chr19 867207 867220 NFKB2 JASPAR yes 111980383
chr19 867212 867216 NFE TRANSFAC yes 70777484
chr19 867212 867216 NFE TRANSFAC yes 111980384
chr19 867221 867242 ZNF263 JASPAR yes 70777485
chr19 867221 867242 ZNF263 JASPAR yes 111980385
chr19 867225 867231 YY1 JASPAR yes 70777486
chr19 867225 867231 YY1 JASPAR yes 111980386
chr19 867227 867242 TFAP2C JASPAR yes 70777487
chr19 867227 867242 TFAP2C JASPAR yes 111980387
chr19 867247 867265 ESR2 JASPAR yes 70777488
chr19 867247 867265 ESR2 JASPAR yes 111980388
chr19 867248 867258 SP1 JASPAR yes 70777489
chr19 867248 867258 SP1 JASPAR yes 111980389
chr19 867248 867268 ESR1 JASPAR yes 70777490
chr19 867248 867268 ESR1 JASPAR yes 111980390
chr19 867286 867296 SP1 JASPAR yes 70777491
chr19 867286 867296 SP1 JASPAR yes 111980391
chr19 867293 867298 SP1 TRANSFAC yes 70777492
chr19 867293 867298 SP1 TRANSFAC yes 111980392
chr19 867293 867307 PLAG1 JASPAR yes 70777493
chr19 867293 867307 PLAG1 JASPAR yes 111980393
chr19 867304 867314 ZNF740 JASPAR yes 70777494
chr19 867304 867314 ZNF740 JASPAR yes 111980394
chr19 867309 867314 SP1 TRANSFAC yes 70777495
chr19 867309 867314 SP1 TRANSFAC yes 111980395
chr19 867309 867323 PLAG1 JASPAR yes 70777496
chr19 867309 867323 PLAG1 JASPAR yes 111980396
chr19 867320 867330 ZNF740 JASPAR yes 70777497
chr19 867320 867330 ZNF740 JASPAR yes 111980397
chr19 867325 867330 SP1 TRANSFAC yes 70777498
chr19 867325 867330 SP1 TRANSFAC yes 111980398
chr19 867325 867339 PLAG1 JASPAR yes 70777499
chr19 867325 867339 PLAG1 JASPAR yes 111980399
chr19 867350 867361 USF1 JASPAR yes 70777500
chr19 867350 867361 USF1 JASPAR yes 111980400
chr19 867370 867381 E2F4 JASPAR yes 70777501
chr19 867370 867381 E2F6 JASPAR yes 70777502
chr19 867370 867381 E2F4 JASPAR yes 111980401
chr19 867370 867381 E2F6 JASPAR yes 111980402
chr19 867371 867382 E2F1 JASPAR yes 70777503
chr19 867371 867382 E2F1 JASPAR yes 111980403
chr19 867392 867401 HIC2 JASPAR yes 70777504
chr19 867392 867401 HIC2 JASPAR yes 111980404
chr19 867395 867399 LFA1 TRANSFAC yes 70777505
chr19 867395 867399 LFA1 TRANSFAC yes 111980405
chr19 867400 867410 SREBF1 JASPAR yes 70777506
chr19 867400 867410 SREBF2 JASPAR yes 70777507
chr19 867400 867410 SREBF1 JASPAR yes 111980406
chr19 867400 867410 SREBF2 JASPAR yes 111980407
SNP sites on vista28114[chr19:867005-867400]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 867041 rs147381547 C CACCCCCGTGGCGGCTGG
INSM1 SP1
5368668
chr19 867072 rs149484596 TTCTG T
AR NR3C1 NR3C2
5368669
chr19 867079 rs1651892 T A,C,G
NFE SMAD2
5368670
chr19 867221 rs144457121 C CA
ZNF263
5368671
chr19 867233 rs377401546 AG A
TFAP2C ZNF263
5368672
chr19 867292 rs200071794 CGGGGGCCTTAAAGTGG C
SP1
5368673
chr19 867292 rs535625106 CGGGGGCCTTAAAGTGG C
SP1
5368674
chr19 867292 rs547315598 CGGGGGCCTTAAAGTGGGGGGGCCTTAAAGTGG C
SP1
5368675
chr19 867385 rs73492564 G A no 5368676
chr19 867389 rs114289589 C T no 5368677
Genes possibly regulated by vista28114[chr19:867005-867400]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 797075 812327 + PTBP1 ENSG00000011304.12 797075 0.67 1.0 16716 30070
chr19 812518 821967 - LPPR3 ENSG00000129951.14 821967 0.95 0.95 16717 54962
chr19 825097 832017 + AZU1 ENSG00000172232.5 825097 0.94 0.92 16718 58092
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 73958
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 84009
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 92448
chr19 867962 893218 - MED16 ENSG00000175221.10 893218 0.58 1.0 16722 74182
chr19 896503 913240 - R3HDM4 ENSG00000198858.5 913240 0.74 1.0 16723 54160
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 50113
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 41619
Expression level of Genes
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miRNAs possibly regulated by vista28114[chr19:867005-867400]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results