EnhancerDB
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  3. vista28121[chr19:933164-933556]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28121[chr19:933164-933556]
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Tissue distribution of vista28121
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Transcription factor that possibly regulate vista28121[chr19:933164-933556]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 933168 933183 ZIC3 JASPAR yes 70777740
chr19 933168 933183 ZIC4 JASPAR yes 70777741
chr19 933168 933183 ZIC3 JASPAR yes 111983533
chr19 933168 933183 ZIC4 JASPAR yes 111983534
chr19 933168 933184 GLIS1 JASPAR yes 70777742
chr19 933168 933184 GLIS1 JASPAR yes 111983535
chr19 933169 933182 TFAP2A JASPAR yes 70777743
chr19 933169 933182 TFAP2B JASPAR yes 70777744
chr19 933169 933182 TFAP2A JASPAR yes 111983536
chr19 933169 933182 TFAP2B JASPAR yes 111983537
chr19 933169 933183 GLIS2 JASPAR yes 70777745
chr19 933169 933183 GLIS3 JASPAR yes 70777746
chr19 933169 933183 ZIC1 JASPAR yes 70777747
chr19 933169 933183 GLIS2 JASPAR yes 111983538
chr19 933169 933183 GLIS3 JASPAR yes 111983539
chr19 933169 933183 ZIC1 JASPAR yes 111983540
chr19 933173 933183 ZNF740 JASPAR yes 70777748
chr19 933173 933183 ZNF740 JASPAR yes 111983541
chr19 933173 933185 ZBTB7B JASPAR yes 70777749
chr19 933173 933185 ZBTB7C JASPAR yes 70777750
chr19 933173 933185 ZBTB7B JASPAR yes 111983542
chr19 933173 933185 ZBTB7C JASPAR yes 111983543
chr19 933203 933217 PLAG1 JASPAR yes 70777751
chr19 933203 933217 PLAG1 JASPAR yes 111983544
chr19 933211 933221 ZNF740 JASPAR yes 70777752
chr19 933211 933221 ZNF740 JASPAR yes 111983545
chr19 933212 933232 RREB1 JASPAR yes 70777753
chr19 933212 933232 RREB1 JASPAR yes 111983546
chr19 933215 933226 FOSL2 JASPAR yes 70777754
chr19 933215 933226 FOSL2 JASPAR yes 111983547
chr19 933215 933229 PLAG1 JASPAR yes 70777755
chr19 933215 933229 PLAG1 JASPAR yes 111983548
chr19 933223 933232 ZEB1 JASPAR yes 70777756
chr19 933223 933232 ZEB1 JASPAR yes 111983549
chr19 933224 933232 TBX5 JASPAR yes 70777757
chr19 933224 933232 TBX5 JASPAR yes 111983550
chr19 933273 933278 SP1 TRANSFAC yes 70777758
chr19 933273 933278 SP1 TRANSFAC yes 111983551
chr19 933287 933292 SP1 TRANSFAC yes 70777759
chr19 933287 933292 SP1 TRANSFAC yes 111983552
chr19 933287 933294 SP1 TRANSFAC yes 70777760
chr19 933287 933294 SP1 TRANSFAC yes 111983553
chr19 933287 933301 PLAG1 JASPAR yes 70777761
chr19 933287 933301 PLAG1 JASPAR yes 111983554
chr19 933289 933304 ZIC3 JASPAR yes 70777762
chr19 933289 933304 ZIC4 JASPAR yes 70777763
chr19 933289 933304 ZIC3 JASPAR yes 111983555
chr19 933289 933304 ZIC4 JASPAR yes 111983556
chr19 933290 933304 GLIS2 JASPAR yes 70777764
chr19 933290 933304 ZIC1 JASPAR yes 70777765
chr19 933290 933304 GLIS2 JASPAR yes 111983557
chr19 933290 933304 ZIC1 JASPAR yes 111983558
chr19 933297 933311 PLAG1 JASPAR yes 70777766
chr19 933297 933311 PLAG1 JASPAR yes 111983559
chr19 933297 933315 ESR1 JASPAR yes 70777767
chr19 933297 933315 ESR1 JASPAR yes 111983560
chr19 933319 933333 SPI1 JASPAR yes 70777768
chr19 933319 933333 SPI1 JASPAR yes 111983561
chr19 933320 933333 ELF1 JASPAR yes 70777769
chr19 933320 933333 ELF1 JASPAR yes 111983562
chr19 933321 933333 EHF JASPAR yes 70777770
chr19 933321 933333 ELF4 JASPAR yes 70777771
chr19 933321 933333 EHF JASPAR yes 111983563
chr19 933321 933333 ELF4 JASPAR yes 111983564
chr19 933321 933334 ELF3 JASPAR yes 70777772
chr19 933321 933334 ELF3 JASPAR yes 111983565
chr19 933322 933333 ELF5 JASPAR yes 70777773
chr19 933322 933333 ELF5 JASPAR yes 111983566
chr19 933323 933329 PEA3 TRANSFAC yes 70777774
chr19 933323 933329 PEA3 TRANSFAC yes 111983567
chr19 933323 933333 ETV6 JASPAR yes 70777775
chr19 933323 933333 ETV6 JASPAR yes 111983568
chr19 933323 933334 FLI1 JASPAR yes 70777776
chr19 933323 933334 FLI1 JASPAR yes 111983569
chr19 933324 933332 EHF JASPAR yes 70777777
chr19 933324 933332 EHF JASPAR yes 111983570
chr19 933325 933332 SPI1 JASPAR yes 70777778
chr19 933325 933332 SPI1 JASPAR yes 111983571
chr19 933333 933338 SP1 TRANSFAC yes 70777779
chr19 933333 933338 SP1 TRANSFAC yes 111983572
chr19 933333 933344 NFKB1 JASPAR yes 70777780
chr19 933333 933344 NFKB1 JASPAR yes 111983573
chr19 933337 933342 SP1 TRANSFAC yes 70777781
chr19 933337 933342 SP1 TRANSFAC yes 111983574
chr19 933337 933343 SP1 TRANSFAC yes 70777782
chr19 933337 933343 SP1 TRANSFAC yes 111983575
chr19 933350 933362 TFAP2A JASPAR yes 70777783
chr19 933350 933362 TFAP2B JASPAR yes 70777784
chr19 933350 933362 TFAP2C JASPAR yes 70777785
chr19 933350 933362 TFAP2A JASPAR yes 111983576
chr19 933350 933362 TFAP2B JASPAR yes 111983577
chr19 933350 933362 TFAP2C JASPAR yes 111983578
chr19 933350 933365 ZIC4 JASPAR yes 70777786
chr19 933350 933365 ZIC4 JASPAR yes 111983579
chr19 933351 933362 TFAP2A JASPAR yes 70777787
chr19 933351 933362 TFAP2B JASPAR yes 70777788
chr19 933351 933362 TFAP2A JASPAR yes 111983580
chr19 933351 933362 TFAP2B JASPAR yes 111983581
chr19 933351 933365 ZIC1 JASPAR yes 70777789
chr19 933351 933365 ZIC1 JASPAR yes 111983582
chr19 933357 933362 SP1 TRANSFAC yes 70777790
chr19 933357 933362 SP1 TRANSFAC yes 111983583
chr19 933367 933380 ELF1 JASPAR yes 70777791
chr19 933367 933380 ELF1 JASPAR yes 111983584
chr19 933370 933377 SPIB JASPAR yes 70777792
chr19 933370 933377 SPIB JASPAR yes 111983585
chr19 933370 933380 ETV6 JASPAR yes 70777793
chr19 933370 933380 GABPA JASPAR yes 70777794
chr19 933370 933380 ETV6 JASPAR yes 111983586
chr19 933370 933380 GABPA JASPAR yes 111983587
chr19 933370 933381 ELK4 JASPAR yes 70777795
chr19 933370 933381 FLI1 JASPAR yes 70777796
chr19 933370 933381 ELK4 JASPAR yes 111983588
chr19 933370 933381 FLI1 JASPAR yes 111983589
chr19 933371 933379 EHF JASPAR yes 70777797
chr19 933371 933379 EHF JASPAR yes 111983590
chr19 933372 933379 SPI1 JASPAR yes 70777798
chr19 933372 933379 SPI1 JASPAR yes 111983591
chr19 933374 933389 RFX5 JASPAR yes 70777799
chr19 933374 933389 RFX5 JASPAR yes 111983592
chr19 933383 933388 SP1 TRANSFAC yes 70777800
chr19 933383 933388 SP1 TRANSFAC yes 111983593
chr19 933384 933389 SP1 TRANSFAC yes 70777801
chr19 933384 933389 SP1 TRANSFAC yes 111983594
chr19 933384 933390 SP1 TRANSFAC yes 70777802
chr19 933384 933390 SP1 TRANSFAC yes 111983595
chr19 933391 933406 LEF1 JASPAR yes 70777803
chr19 933391 933406 LEF1 JASPAR yes 111983596
chr19 933392 933406 TCF7L2 JASPAR yes 70777804
chr19 933392 933406 TCF7L2 JASPAR yes 111983597
chr19 933420 933424 LFA1 TRANSFAC yes 70777805
chr19 933420 933424 LFA1 TRANSFAC yes 111983598
chr19 933422 933432 GATA1 TRANSFAC yes 70777806
chr19 933422 933432 GATA1 TRANSFAC yes 111983599
chr19 933427 933446 CTCF JASPAR yes 70777807
chr19 933427 933446 CTCF JASPAR yes 111983600
chr19 933430 933442 TAL1 JASPAR yes 70777808
chr19 933430 933442 TAL1 JASPAR yes 111983601
chr19 933432 933442 OLIG1 JASPAR yes 70777809
chr19 933432 933442 OLIG3 JASPAR yes 70777810
chr19 933432 933442 OLIG1 JASPAR yes 111983602
chr19 933432 933442 OLIG3 JASPAR yes 111983603
chr19 933432 933444 TAL1 JASPAR yes 70777811
chr19 933432 933444 TAL1 JASPAR yes 111983604
chr19 933451 933461 TEAD1 JASPAR yes 70777812
chr19 933451 933461 TEAD4 JASPAR yes 70777813
chr19 933451 933461 TEAD1 JASPAR yes 111983605
chr19 933451 933461 TEAD4 JASPAR yes 111983606
chr19 933451 933463 TEAD1 JASPAR yes 70777814
chr19 933451 933463 TEAD1 JASPAR yes 111983607
chr19 933452 933460 TEAD3 JASPAR yes 70777815
chr19 933452 933460 TEAD3 JASPAR yes 111983608
chr19 933498 933510 TFAP2A JASPAR yes 70777816
chr19 933498 933510 TFAP2A JASPAR yes 111983609
chr19 933504 933517 NFKB1 JASPAR yes 70777817
chr19 933504 933517 NFKB1 JASPAR yes 111983610
chr19 933519 933534 TFAP2A JASPAR yes 70777818
chr19 933519 933534 TFAP2A JASPAR yes 111983611
chr19 933520 933531 TFAP2A JASPAR yes 70777819
chr19 933520 933531 TFAP2B JASPAR yes 70777820
chr19 933520 933531 TFAP2C JASPAR yes 70777821
chr19 933520 933531 TFAP2A JASPAR yes 111983612
chr19 933520 933531 TFAP2B JASPAR yes 111983613
chr19 933520 933531 TFAP2C JASPAR yes 111983614
chr19 933521 933530 TFAP2A JASPAR yes 70777822
chr19 933521 933530 TFAP2A JASPAR yes 111983615
SNP sites on vista28121[chr19:933164-933556]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 933173 rs377458703 C T
GLIS1 GLIS2 GLIS3 TFAP2A TFAP2B ZBTB7B ZBTB7C ZIC1 ZIC3 ZIC4 ZNF740
5369601
chr19 933196 rs350149 T A,C no 5369602
chr19 933200 rs116785032 A G no 5369603
chr19 933293 rs556380393 C T
GLIS2 PLAG1 SP1 ZIC1 ZIC3 ZIC4
5369604
chr19 933380 rs542979104 G A
ELF1 ELK4 ETV6 FLI1 GABPA RFX5
5369605
chr19 933388 rs572934814 G A
RFX5 SP1
5369606
chr19 933466 rs141361819 C T no 5369607
chr19 933487 rs350150 G A,C no 5369608
chr19 933521 rs532692336 C A,T
TFAP2A TFAP2B TFAP2C
5369609
chr19 933525 rs350151 C T
TFAP2A TFAP2B TFAP2C
5369610
Genes possibly regulated by vista28121[chr19:933164-933556]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 7799
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 17850
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 26289
chr19 867962 893218 - MED16 ENSG00000175221.10 893218 0.58 1.0 16722 60054
chr19 896503 913240 - R3HDM4 ENSG00000198858.5 913240 0.74 1.0 16723 80076
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 84123
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 92617
chr19 983174 994569 + WDR18 ENSG00000065268.6 983174 0.85 1.0 16726 50382
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 33955
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 33138
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 12439
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 7258
Expression level of Genes
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miRNAs possibly regulated by vista28121[chr19:933164-933556]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results