EnhancerDB
  1. Home
  2. Enhancers
  3. vista28122[chr19:934999-935434]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28122[chr19:934999-935434]
Back to top
Tissue distribution of vista28122
Back to top
Transcription factor that possibly regulate vista28122[chr19:934999-935434]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 934889 935193 FOXA1 UCSC Txn Factor no Conserved 108348353
chr19 934905 935170 FOXA2 UCSC Txn Factor no Conserved 108348358
chr19 934958 935214 MXI1 UCSC Txn Factor no Conserved 108348372
chr19 934984 935192 BHLHE40 UCSC Txn Factor no Conserved 108348378
chr19 935139 935583 GATA2 UCSC Txn Factor no Conserved 108348391
chr19 934993 935004 FOXA1 JASPAR yes 70777823
chr19 934993 935004 FOXA1 JASPAR yes 111983853
chr19 934993 935008 FOXA1 JASPAR yes 70777824
chr19 934993 935008 FOXA1 JASPAR yes 111983854
chr19 935036 935047 E2F4 JASPAR yes 70777825
chr19 935036 935047 E2F6 JASPAR yes 70777826
chr19 935036 935047 E2F4 JASPAR yes 111983855
chr19 935036 935047 E2F6 JASPAR yes 111983856
chr19 935037 935048 E2F1 JASPAR yes 70777827
chr19 935037 935048 E2F1 JASPAR yes 111983857
chr19 935041 935046 SP1 TRANSFAC yes 70777828
chr19 935041 935046 SP1 TRANSFAC yes 111983858
chr19 935057 935062 SP1 TRANSFAC yes 70777829
chr19 935057 935062 SP1 TRANSFAC yes 111983859
chr19 935061 935076 FOXA1 JASPAR yes 70777830
chr19 935061 935076 FOXA1 JASPAR yes 111983860
chr19 935065 935076 FOXA1 JASPAR yes 70777831
chr19 935065 935076 FOXA1 JASPAR yes 111983861
chr19 935076 935087 NRF1 JASPAR yes 70777832
chr19 935076 935087 NRF1 JASPAR yes 111983862
chr19 935080 935086 NFE2 TRANSFAC yes 70777833
chr19 935080 935086 NFE2 TRANSFAC yes 111983863
chr19 935082 935091 SP1 TRANSFAC yes 70777834
chr19 935082 935091 SP1 TRANSFAC yes 111983864
chr19 935083 935093 SP1 JASPAR yes 70777835
chr19 935083 935093 SP1 JASPAR yes 111983865
chr19 935086 935098 INSM1 JASPAR yes 70777836
chr19 935086 935098 INSM1 JASPAR yes 111983866
chr19 935089 935100 FLI1 JASPAR yes 70777837
chr19 935089 935100 FLI1 JASPAR yes 111983867
chr19 935091 935099 EHF JASPAR yes 70777838
chr19 935091 935099 EHF JASPAR yes 111983868
chr19 935092 935103 STAT1 JASPAR yes 70777839
chr19 935092 935103 STAT3 JASPAR yes 70777840
chr19 935092 935103 STAT1 JASPAR yes 111983869
chr19 935092 935103 STAT3 JASPAR yes 111983870
chr19 935096 935110 CREB3L1 JASPAR yes 70777841
chr19 935096 935110 CREB3L1 JASPAR yes 111983871
chr19 935097 935109 HES5 JASPAR yes 70777842
chr19 935097 935109 HES7 JASPAR yes 70777843
chr19 935097 935109 HES5 JASPAR yes 111983872
chr19 935097 935109 HES7 JASPAR yes 111983873
chr19 935098 935108 BHLHE40 JASPAR yes 70777844
chr19 935098 935108 HEY1 JASPAR yes 70777845
chr19 935098 935108 HEY2 JASPAR yes 70777846
chr19 935098 935108 MAX JASPAR yes 70777847
chr19 935098 935108 MLX JASPAR yes 70777848
chr19 935098 935108 MNT JASPAR yes 70777849
chr19 935098 935108 TFE3 JASPAR yes 70777850
chr19 935098 935108 TFEB JASPAR yes 70777851
chr19 935098 935108 BHLHE40 JASPAR yes 111983874
chr19 935098 935108 HEY1 JASPAR yes 111983875
chr19 935098 935108 HEY2 JASPAR yes 111983876
chr19 935098 935108 MAX JASPAR yes 111983877
chr19 935098 935108 MLX JASPAR yes 111983878
chr19 935098 935108 MNT JASPAR yes 111983879
chr19 935098 935108 TFE3 JASPAR yes 111983880
chr19 935098 935108 TFEB JASPAR yes 111983881
chr19 935098 935109 USF2 JASPAR yes 70777852
chr19 935098 935109 USF2 JASPAR yes 111983882
chr19 935099 935109 MAX JASPAR yes 70777853
chr19 935099 935109 MAX JASPAR yes 111983883
chr19 935100 935105 MYC TRANSFAC yes 70777854
chr19 935100 935105 USF1 TRANSFAC yes 70777855
chr19 935100 935105 USF2 TRANSFAC yes 70777856
chr19 935100 935105 MYC TRANSFAC yes 111983884
chr19 935100 935105 USF1 TRANSFAC yes 111983885
chr19 935100 935105 USF2 TRANSFAC yes 111983886
chr19 935100 935107 USF1 JASPAR yes 70777857
chr19 935100 935107 USF1 JASPAR yes 111983887
chr19 935130 935140 NFIA JASPAR yes 70777858
chr19 935130 935140 NFIA JASPAR yes 111983888
chr19 935131 935140 NFIX JASPAR yes 70777859
chr19 935131 935140 NFIX JASPAR yes 111983889
chr19 935132 935138 NFIC JASPAR yes 70777860
chr19 935132 935138 NFIC JASPAR yes 111983890
chr19 935136 935141 MYC TRANSFAC yes 70777861
chr19 935136 935141 MYC TRANSFAC yes 111983891
chr19 935157 935176 REST JASPAR yes 70777862
chr19 935157 935176 REST JASPAR yes 111983892
chr19 935160 935164 H4TF2 TRANSFAC yes 70777863
chr19 935160 935164 H4TF2 TRANSFAC yes 111983893
chr19 935181 935184 MYB TRANSFAC yes 70777864
chr19 935181 935184 MYB TRANSFAC yes 111983894
chr19 935181 935191 HINFP JASPAR yes 70777865
chr19 935181 935191 HINFP JASPAR yes 111983895
chr19 935181 935192 ELK4 JASPAR yes 70777866
chr19 935181 935192 ELK4 JASPAR yes 111983896
chr19 935181 935194 ELF3 JASPAR yes 70777867
chr19 935181 935194 ELF3 JASPAR yes 111983897
chr19 935182 935192 ELK1 JASPAR yes 70777868
chr19 935182 935192 ETV6 JASPAR yes 70777869
chr19 935182 935192 ELK1 JASPAR yes 111983898
chr19 935182 935192 ETV6 JASPAR yes 111983899
chr19 935182 935193 ELF5 JASPAR yes 70777870
chr19 935182 935193 ELF5 JASPAR yes 111983900
chr19 935182 935194 EHF JASPAR yes 70777871
chr19 935182 935194 ELF1 JASPAR yes 70777872
chr19 935182 935194 ELF4 JASPAR yes 70777873
chr19 935182 935194 EHF JASPAR yes 111983901
chr19 935182 935194 ELF1 JASPAR yes 111983902
chr19 935182 935194 ELF4 JASPAR yes 111983903
chr19 935182 935195 ELF1 JASPAR yes 70777874
chr19 935182 935195 ELF1 JASPAR yes 111983904
chr19 935184 935190 ETS1 JASPAR yes 70777875
chr19 935184 935190 SPI1 JASPAR yes 70777876
chr19 935184 935190 ETS1 JASPAR yes 111983905
chr19 935184 935190 SPI1 JASPAR yes 111983906
chr19 935193 935210 BCL6B JASPAR yes 70777877
chr19 935193 935210 BCL6B JASPAR yes 111983907
chr19 935202 935214 PKNOX1 JASPAR yes 70777878
chr19 935202 935214 PKNOX2 JASPAR yes 70777879
chr19 935202 935214 TGIF1 JASPAR yes 70777880
chr19 935202 935214 TGIF2 JASPAR yes 70777881
chr19 935202 935214 PKNOX1 JASPAR yes 111983908
chr19 935202 935214 PKNOX2 JASPAR yes 111983909
chr19 935202 935214 TGIF1 JASPAR yes 111983910
chr19 935202 935214 TGIF2 JASPAR yes 111983911
chr19 935203 935213 MSC JASPAR yes 70777882
chr19 935203 935213 MYF6 JASPAR yes 70777883
chr19 935203 935213 NHLH1 JASPAR yes 70777884
chr19 935203 935213 TFAP4 JASPAR yes 70777885
chr19 935203 935213 MSC JASPAR yes 111983912
chr19 935203 935213 MYF6 JASPAR yes 111983913
chr19 935203 935213 NHLH1 JASPAR yes 111983914
chr19 935203 935213 TFAP4 JASPAR yes 111983915
chr19 935221 935225 NFE TRANSFAC yes 70777886
chr19 935221 935225 NFE TRANSFAC yes 111983916
chr19 935238 935243 SP1 TRANSFAC yes 70777887
chr19 935238 935243 SP1 TRANSFAC yes 111983917
chr19 935240 935255 RFX5 JASPAR yes 70777888
chr19 935240 935255 RFX5 JASPAR yes 111983918
chr19 935252 935267 ZIC3 JASPAR yes 70777889
chr19 935252 935267 ZIC4 JASPAR yes 70777890
chr19 935252 935267 ZIC3 JASPAR yes 111983919
chr19 935252 935267 ZIC4 JASPAR yes 111983920
chr19 935253 935267 GLIS2 JASPAR yes 70777891
chr19 935253 935267 GLIS3 JASPAR yes 70777892
chr19 935253 935267 ZIC1 JASPAR yes 70777893
chr19 935253 935267 GLIS2 JASPAR yes 111983921
chr19 935253 935267 GLIS3 JASPAR yes 111983922
chr19 935253 935267 ZIC1 JASPAR yes 111983923
chr19 935256 935261 SP1 TRANSFAC yes 70777894
chr19 935256 935261 SP1 TRANSFAC yes 111983924
chr19 935256 935262 SP1 TRANSFAC yes 70777895
chr19 935256 935262 SP1 TRANSFAC yes 111983925
chr19 935261 935266 SP1 TRANSFAC yes 70777896
chr19 935261 935266 SP1 TRANSFAC yes 111983926
chr19 935261 935268 SP1 TRANSFAC yes 70777897
chr19 935261 935268 SP1 TRANSFAC yes 111983927
chr19 935261 935270 SP1 TRANSFAC yes 70777898
chr19 935261 935270 SP1 TRANSFAC yes 111983928
chr19 935262 935276 MTF1 JASPAR yes 70777899
chr19 935262 935276 MTF1 JASPAR yes 111983929
chr19 935297 935302 ETS2 TRANSFAC yes 70777900
chr19 935297 935302 ETS2 TRANSFAC yes 111983930
chr19 935304 935314 ID4 JASPAR yes 70777901
chr19 935304 935314 TCF4 JASPAR yes 70777902
chr19 935304 935314 ID4 JASPAR yes 111983931
chr19 935304 935314 TCF4 JASPAR yes 111983932
chr19 935306 935311 USF2 TRANSFAC yes 70777903
chr19 935306 935311 USF2 TRANSFAC yes 111983933
chr19 935311 935325 NR2F1 JASPAR yes 70777904
chr19 935311 935325 NR2F1 JASPAR yes 111983934
chr19 935318 935333 TFAP2A JASPAR yes 70777905
chr19 935318 935333 TFAP2A JASPAR yes 111983935
chr19 935320 935335 TFAP2C JASPAR yes 70777906
chr19 935320 935335 TFAP2C JASPAR yes 111983936
chr19 935321 935332 TFAP2A JASPAR yes 70777907
chr19 935321 935332 TFAP2B JASPAR yes 70777908
chr19 935321 935332 TFAP2C JASPAR yes 70777909
chr19 935321 935332 TFAP2A JASPAR yes 111983937
chr19 935321 935332 TFAP2B JASPAR yes 111983938
chr19 935321 935332 TFAP2C JASPAR yes 111983939
chr19 935321 935333 INSM1 JASPAR yes 70777910
chr19 935321 935333 TFAP2B JASPAR yes 70777911
chr19 935321 935333 TFAP2C JASPAR yes 70777912
chr19 935321 935333 INSM1 JASPAR yes 111983940
chr19 935321 935333 TFAP2B JASPAR yes 111983941
chr19 935321 935333 TFAP2C JASPAR yes 111983942
chr19 935322 935331 TFAP2A JASPAR yes 70777913
chr19 935322 935331 TFAP2A JASPAR yes 111983943
chr19 935326 935331 SP1 TRANSFAC yes 70777914
chr19 935326 935331 SP1 TRANSFAC yes 111983944
chr19 935327 935342 TFAP2C JASPAR yes 70777915
chr19 935327 935342 TFAP2C JASPAR yes 111983945
chr19 935332 935337 TFAP2A TRANSFAC yes 70777916
chr19 935332 935337 TFAP2A TRANSFAC yes 111983946
chr19 935332 935338 MZF1 JASPAR yes 70777917
chr19 935332 935338 MZF1 JASPAR yes 111983947
chr19 935355 935367 HES5 JASPAR yes 70777918
chr19 935355 935367 HES7 JASPAR yes 70777919
chr19 935355 935367 HES5 JASPAR yes 111983948
chr19 935355 935367 HES7 JASPAR yes 111983949
chr19 935356 935366 BHLHE40 JASPAR yes 70777920
chr19 935356 935366 BHLHE41 JASPAR yes 70777921
chr19 935356 935366 CLOCK JASPAR yes 70777922
chr19 935356 935366 HEY1 JASPAR yes 70777923
chr19 935356 935366 HEY2 JASPAR yes 70777924
chr19 935356 935366 MAX JASPAR yes 70777925
chr19 935356 935366 MLXIPL JASPAR yes 70777926
chr19 935356 935366 MLX JASPAR yes 70777927
chr19 935356 935366 MNT JASPAR yes 70777928
chr19 935356 935366 BHLHE40 JASPAR yes 111983950
chr19 935356 935366 BHLHE41 JASPAR yes 111983951
chr19 935356 935366 CLOCK JASPAR yes 111983952
chr19 935356 935366 HEY1 JASPAR yes 111983953
chr19 935356 935366 HEY2 JASPAR yes 111983954
chr19 935356 935366 MAX JASPAR yes 111983955
chr19 935356 935366 MLXIPL JASPAR yes 111983956
chr19 935356 935366 MLX JASPAR yes 111983957
chr19 935356 935366 MNT JASPAR yes 111983958
chr19 935358 935363 MYC TRANSFAC yes 70777929
chr19 935358 935363 USF1 TRANSFAC yes 70777930
chr19 935358 935363 USF2 TRANSFAC yes 70777931
chr19 935358 935363 MYC TRANSFAC yes 111983959
chr19 935358 935363 USF1 TRANSFAC yes 111983960
chr19 935358 935363 USF2 TRANSFAC yes 111983961
chr19 935366 935370 LFA1 TRANSFAC yes 70777932
chr19 935366 935370 LFA1 TRANSFAC yes 111983962
chr19 935397 935411 XBP1 JASPAR yes 70777933
chr19 935397 935411 XBP1 JASPAR yes 111983963
chr19 935399 935404 ATF1 TRANSFAC yes 70777934
chr19 935399 935404 ATF1 TRANSFAC yes 111983964
chr19 935402 935421 CTCF JASPAR yes 70777935
chr19 935402 935421 CTCF JASPAR yes 111983965
chr19 935421 935429 MEIS3 JASPAR yes 70777936
chr19 935421 935429 MEIS3 JASPAR yes 111983966
chr19 935422 935426 NFE TRANSFAC yes 70777937
chr19 935422 935426 NFE TRANSFAC yes 111983967
SNP sites on vista28122[chr19:934999-935434]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 935120 rs528978224 G A
BHLHE40 FOXA1 FOXA2 MXI1
5369638
chr19 935145 rs113600791 C T
BHLHE40 FOXA1 FOXA2 GATA2 MXI1
5369639
chr19 935233 rs537813979 A C
GATA2
5369640
chr19 935254 rs561519058 C T
GATA2 GLIS2 GLIS3 RFX5 ZIC1 ZIC3 ZIC4
5369641
chr19 935268 rs572671533 G A
GATA2 MTF1 SP1
5369642
chr19 935292 rs116135891 G T
GATA2
5369643
chr19 935335 rs372812850 G C
GATA2 MZF1 TFAP2A TFAP2C
5369644
chr19 935361 rs73507564 C T
BHLHE40 BHLHE41 CLOCK GATA2 HES5 HES7 HEY1 HEY2 MAX MLX MLXIPL MNT MYC USF1 USF2
5369645
chr19 935367 rs374207526 G A
GATA2 HES5 HES7 LFA1
5369646
Genes possibly regulated by vista28122[chr19:934999-935434]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 840963 848175 + PRTN3 ENSG00000196415.5 840963 0.94 1.0 16719 5964
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 16015
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 24454
chr19 867962 893218 - MED16 ENSG00000175221.10 893218 0.58 1.0 16722 58219
chr19 896503 913240 - R3HDM4 ENSG00000198858.5 913240 0.74 1.0 16723 78241
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 82288
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 90782
chr19 983174 994569 + WDR18 ENSG00000065268.6 983174 0.85 1.0 16726 52260
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 35833
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 35016
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 14317
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 9136
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28122[chr19:934999-935434]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results