EnhancerDB
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  3. vista28123[chr19:947564-948104]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28123[chr19:947564-948104]
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Tissue distribution of vista28123
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Transcription factor that possibly regulate vista28123[chr19:947564-948104]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 947571 948084 NFIC UCSC Txn Factor no Conserved 108348476
chr19 947572 948128 RUNX3 UCSC Txn Factor no Conserved 108348479
chr19 947612 948031 BATF UCSC Txn Factor no Conserved 108348482
chr19 947683 948069 TCF3 UCSC Txn Factor no Conserved 108348503
chr19 947695 948083 TCF12 UCSC Txn Factor no Conserved 108348505
chr19 947715 948023 SPI1 UCSC Txn Factor no Conserved 108348510
chr19 947777 948107 BHLHE40 UCSC Txn Factor no Conserved 108348532
chr19 947875 948165 ZNF143 UCSC Txn Factor no Conserved 108348548
chr19 947550 947565 MYBL2 JASPAR yes 70777938
chr19 947550 947565 MYBL2 JASPAR yes 111985804
chr19 947573 947588 RFX5 JASPAR yes 70777939
chr19 947573 947588 RFX5 JASPAR yes 111985805
chr19 947606 947623 PAX1 JASPAR yes 70777940
chr19 947606 947623 PAX9 JASPAR yes 70777941
chr19 947606 947623 PAX1 JASPAR yes 111985806
chr19 947606 947623 PAX9 JASPAR yes 111985807
chr19 947620 947627 CEBPA TRANSFAC yes 70777942
chr19 947620 947627 CEBPA TRANSFAC yes 111985808
chr19 947630 947638 CREB1 JASPAR yes 70777943
chr19 947630 947638 CREB1 JASPAR yes 111985809
chr19 947631 947643 CREB1 JASPAR yes 70777944
chr19 947631 947643 CREB1 JASPAR yes 111985810
chr19 947634 947645 NRL JASPAR yes 70777945
chr19 947634 947645 NRL JASPAR yes 111985811
chr19 947643 947651 SP1 TRANSFAC yes 70777946
chr19 947643 947651 SP1 TRANSFAC yes 111985812
chr19 947653 947663 MLX JASPAR yes 70777947
chr19 947653 947663 SREBF2 JASPAR yes 70777948
chr19 947653 947663 TFE3 JASPAR yes 70777949
chr19 947653 947663 TFEC JASPAR yes 70777950
chr19 947653 947663 MLX JASPAR yes 111985813
chr19 947653 947663 SREBF2 JASPAR yes 111985814
chr19 947653 947663 TFE3 JASPAR yes 111985815
chr19 947653 947663 TFEC JASPAR yes 111985816
chr19 947665 947675 RELA JASPAR yes 70777951
chr19 947665 947675 REL JASPAR yes 70777952
chr19 947665 947675 RELA JASPAR yes 111985817
chr19 947665 947675 REL JASPAR yes 111985818
chr19 947665 947676 FOXH1 JASPAR yes 70777953
chr19 947665 947676 FOXH1 JASPAR yes 111985819
chr19 947669 947675 ZNF354C JASPAR yes 70777954
chr19 947669 947675 ZNF354C JASPAR yes 111985820
chr19 947722 947726 YY1 TRANSFAC yes 70777955
chr19 947722 947726 YY1 TRANSFAC yes 111985821
chr19 947736 947748 MEF2A JASPAR yes 70777956
chr19 947736 947748 MEF2B JASPAR yes 70777957
chr19 947736 947748 MEF2D JASPAR yes 70777958
chr19 947736 947748 MEF2A JASPAR yes 111985822
chr19 947736 947748 MEF2B JASPAR yes 111985823
chr19 947736 947748 MEF2D JASPAR yes 111985824
chr19 947744 947749 GATA2 JASPAR yes 70777959
chr19 947744 947749 GATA2 JASPAR yes 111985825
chr19 947747 947752 SP1 TRANSFAC yes 70777960
chr19 947747 947752 SP1 TRANSFAC yes 111985826
chr19 947747 947753 SP1 TRANSFAC yes 70777961
chr19 947747 947753 SP1 TRANSFAC yes 111985827
chr19 947767 947778 FOXH1 JASPAR yes 70777962
chr19 947767 947778 FOXH1 JASPAR yes 111985828
chr19 947771 947775 YY1 TRANSFAC yes 70777963
chr19 947771 947775 YY1 TRANSFAC yes 111985829
chr19 947791 947796 SP1 TRANSFAC yes 70777964
chr19 947791 947796 SP1 TRANSFAC yes 111985830
chr19 947819 947832 ZBTB18 JASPAR yes 70777965
chr19 947819 947832 ZBTB18 JASPAR yes 111985831
chr19 947821 947831 NEUROG2 JASPAR yes 70777966
chr19 947821 947831 NEUROG2 JASPAR yes 111985832
chr19 947821 947833 TAL1 JASPAR yes 70777967
chr19 947821 947833 TAL1 JASPAR yes 111985833
chr19 947824 947844 TP53 JASPAR yes 70777968
chr19 947824 947844 TP53 JASPAR yes 111985834
chr19 947836 947845 THAP1 JASPAR yes 70777969
chr19 947836 947845 THAP1 JASPAR yes 111985835
chr19 947847 947861 SPI1 JASPAR yes 70777970
chr19 947847 947861 SPI1 JASPAR yes 111985836
chr19 947851 947857 MZF1 JASPAR yes 70777971
chr19 947851 947857 MZF1 JASPAR yes 111985837
chr19 947854 947858 H1TF2 TRANSFAC yes 70777972
chr19 947854 947858 NFE TRANSFAC yes 70777973
chr19 947854 947858 SRF TRANSFAC yes 70777974
chr19 947854 947858 H1TF2 TRANSFAC yes 111985838
chr19 947854 947858 NFE TRANSFAC yes 111985839
chr19 947854 947858 SRF TRANSFAC yes 111985840
chr19 947860 947866 MZF1 JASPAR yes 70777975
chr19 947860 947866 MZF1 JASPAR yes 111985841
chr19 947865 947870 SP1 TRANSFAC yes 70777976
chr19 947865 947870 SP1 TRANSFAC yes 111985842
chr19 947871 947876 SP1 TRANSFAC yes 70777977
chr19 947871 947876 SP1 TRANSFAC yes 111985843
chr19 947871 947877 SP1 TRANSFAC yes 70777978
chr19 947871 947877 SP1 TRANSFAC yes 111985844
chr19 947882 947895 ZBTB18 JASPAR yes 70777979
chr19 947882 947895 ZBTB18 JASPAR yes 111985845
chr19 947907 947918 NRL JASPAR yes 70777980
chr19 947907 947918 NRL JASPAR yes 111985846
chr19 947918 947933 PRDM1 JASPAR yes 70777981
chr19 947918 947933 STAT2 JASPAR yes 70777982
chr19 947918 947933 PRDM1 JASPAR yes 111985847
chr19 947918 947933 STAT2 JASPAR yes 111985848
chr19 947922 947927 MYB TRANSFAC yes 70777983
chr19 947922 947927 MYB TRANSFAC yes 111985849
chr19 947947 947952 SP1 TRANSFAC yes 70777984
chr19 947947 947952 SP1 TRANSFAC yes 111985850
chr19 947948 947953 SP1 TRANSFAC yes 70777985
chr19 947948 947953 SP1 TRANSFAC yes 111985851
chr19 947948 947954 SP1 TRANSFAC yes 70777986
chr19 947948 947954 SP1 TRANSFAC yes 111985852
chr19 947950 947963 NFKB1 JASPAR yes 70777987
chr19 947950 947963 NFKB2 JASPAR yes 70777988
chr19 947950 947963 NFKB1 JASPAR yes 111985853
chr19 947950 947963 NFKB2 JASPAR yes 111985854
chr19 947951 947962 NFKB1 JASPAR yes 70777989
chr19 947951 947962 NFKB1 JASPAR yes 111985855
chr19 947951 947964 NFKB1 JASPAR yes 70777990
chr19 947951 947964 NFKB2 JASPAR yes 70777991
chr19 947951 947964 NFKB1 JASPAR yes 111985856
chr19 947951 947964 NFKB2 JASPAR yes 111985857
chr19 947952 947962 NFKB1 JASPAR yes 70777992
chr19 947952 947962 NFKB1 JASPAR yes 111985858
chr19 947952 947963 NFKB1 JASPAR yes 70777993
chr19 947952 947963 NFKB1 JASPAR yes 111985859
chr19 947953 947964 NFKB1 JASPAR yes 70777994
chr19 947953 947964 NFKB1 JASPAR yes 111985860
chr19 947956 947968 TFAP2A JASPAR yes 70777995
chr19 947956 947968 TFAP2A JASPAR yes 111985861
chr19 947958 947967 TFAP2A JASPAR yes 70777996
chr19 947958 947967 TFAP2A JASPAR yes 111985862
chr19 947968 947972 ESR1 TRANSFAC yes 70777997
chr19 947968 947972 ESR1 TRANSFAC yes 111985863
chr19 947969 947979 ID4 JASPAR yes 70777998
chr19 947969 947979 ID4 JASPAR yes 111985864
chr19 948012 948021 HiNF-C TRANSFAC yes 70777999
chr19 948012 948021 HiNF-C TRANSFAC yes 111985865
chr19 948012 948022 SP1 JASPAR yes 70778000
chr19 948012 948022 SP1 JASPAR yes 111985866
chr19 948013 948019 SP1 TRANSFAC yes 70778001
chr19 948013 948019 SP1 TRANSFAC yes 111985867
chr19 948014 948019 SP1 TRANSFAC yes 70778002
chr19 948014 948019 SP1 TRANSFAC yes 111985868
chr19 948014 948025 E2F4 JASPAR yes 70778003
chr19 948014 948025 E2F4 JASPAR yes 111985869
chr19 948015 948020 SP1 TRANSFAC yes 70778004
chr19 948015 948020 SP1 TRANSFAC yes 111985870
chr19 948015 948021 SP1 TRANSFAC yes 70778005
chr19 948015 948021 SP1 TRANSFAC yes 111985871
chr19 948019 948024 ETS2 TRANSFAC yes 70778006
chr19 948019 948024 ETS2 TRANSFAC yes 111985872
chr19 948022 948037 TFAP2A JASPAR yes 70778007
chr19 948022 948037 TFAP2A JASPAR yes 111985873
chr19 948023 948037 NR2F1 JASPAR yes 70778008
chr19 948023 948037 NR2F1 JASPAR yes 111985874
chr19 948024 948039 TFAP2C JASPAR yes 70778009
chr19 948024 948039 TFAP2C JASPAR yes 111985875
chr19 948028 948041 NR2F1 JASPAR yes 70778010
chr19 948028 948041 NR2F1 JASPAR yes 111985876
chr19 948029 948037 CREB1 JASPAR yes 70778011
chr19 948029 948037 CREB1 JASPAR yes 111985877
chr19 948030 948038 NR4A2 JASPAR yes 70778012
chr19 948030 948038 NR4A2 JASPAR yes 111985878
chr19 948032 948036 ESR1 TRANSFAC yes 70778013
chr19 948032 948036 ESR1 TRANSFAC yes 111985879
chr19 948051 948059 FOXC1 JASPAR yes 70778014
chr19 948051 948059 FOXC1 JASPAR yes 111985880
chr19 948053 948060 NKX3-1 JASPAR yes 70778015
chr19 948053 948060 NKX3-1 JASPAR yes 111985881
chr19 948067 948085 ESR1 JASPAR yes 70778016
chr19 948067 948085 ESR1 JASPAR yes 111985882
chr19 948068 948086 ESR2 JASPAR yes 70778017
chr19 948068 948086 ESR2 JASPAR yes 111985883
chr19 948069 948084 ESR2 JASPAR yes 70778018
chr19 948069 948084 ESR2 JASPAR yes 111985884
chr19 948069 948089 ESR1 JASPAR yes 70778019
chr19 948069 948089 ESR1 JASPAR yes 111985885
chr19 948070 948090 ESR1 JASPAR yes 70778020
chr19 948070 948090 ESR1 JASPAR yes 111985886
chr19 948072 948092 PPARG JASPAR yes 70778021
chr19 948072 948092 PPARG JASPAR yes 111985887
chr19 948073 948091 ESR1 JASPAR yes 70778022
chr19 948073 948091 ESR1 JASPAR yes 111985888
chr19 948074 948092 ESR2 JASPAR yes 70778023
chr19 948074 948092 ESR2 JASPAR yes 111985889
chr19 948075 948090 ESR2 JASPAR yes 70778024
chr19 948075 948090 ESR2 JASPAR yes 111985890
chr19 948075 948095 ESR1 JASPAR yes 70778025
chr19 948075 948095 ESR1 JASPAR yes 111985891
chr19 948076 948087 ESRRA JASPAR yes 70778026
chr19 948076 948087 ESRRA JASPAR yes 111985892
chr19 948078 948095 RARA JASPAR yes 70778027
chr19 948078 948095 RARA JASPAR yes 111985893
chr19 948080 948090 SP1 JASPAR yes 70778028
chr19 948080 948090 SP1 JASPAR yes 111985894
chr19 948085 948095 SP1 JASPAR yes 70778029
chr19 948085 948095 SP1 JASPAR yes 111985895
SNP sites on vista28123[chr19:947564-948104]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 947574 rs568653435 C T
NFIC RFX5 RUNX3
5369912
chr19 947575 rs535730082 G A
NFIC RFX5 RUNX3
5369913
chr19 947590 rs547732105 C T
NFIC RUNX3
5369914
chr19 947712 rs118007399 C T
BATF NFIC RUNX3 TCF12 TCF3
5369915
chr19 947828 rs181726859 T C
BATF BHLHE40 NEUROG2 NFIC RUNX3 SPI1 TAL1 TCF12 TCF3 TP53 ZBTB18
5369916
chr19 947833 rs572455723 G A
BATF BHLHE40 NFIC RUNX3 SPI1 TAL1 TCF12 TCF3 TP53
5369917
chr19 947867 rs117775538 C T
BATF BHLHE40 NFIC RUNX3 SP1 SPI1 TCF12 TCF3
5369918
chr19 947957 rs562140909 A G,T
BATF BHLHE40 NFIC NFKB1 NFKB2 RUNX3 SPI1 TCF12 TCF3 TFAP2A ZNF143
5369919
chr19 947981 rs117964006 G A
BATF BHLHE40 NFIC RUNX3 SPI1 TCF12 TCF3 ZNF143
5369920
chr19 948002 rs547669461 C T
BATF BHLHE40 NFIC RUNX3 SPI1 TCF12 TCF3 ZNF143
5369921
Genes possibly regulated by vista28123[chr19:947564-948104]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 851014 856242 + ELANE ENSG00000197561.2 851014 0.92 0.0 16720 3450
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 11889
chr19 867962 893218 - MED16 ENSG00000175221.10 893218 0.58 1.0 16722 45654
chr19 896503 913240 - R3HDM4 ENSG00000198858.5 913240 0.74 1.0 16723 65676
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 69723
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 78217
chr19 983174 994569 + WDR18 ENSG00000065268.6 983174 0.85 1.0 16726 64930
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 48503
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 47686
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 26987
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 21806
chr19 1040102 1065571 + ABCA7 ENSG00000064687.8 1040102 0.85 1.0 16731 8002
Expression level of Genes
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miRNAs possibly regulated by vista28123[chr19:947564-948104]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results