EnhancerDB
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  3. vista28126[chr19:954903-955312]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28126[chr19:954903-955312]
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Tissue distribution of vista28126
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Transcription factor that possibly regulate vista28126[chr19:954903-955312]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 954363 955136 ZBTB7A UCSC Txn Factor no Conserved 108348871
chr19 954814 955240 EBF1 UCSC Txn Factor no Conserved 108348936
chr19 954867 955322 RUNX3 UCSC Txn Factor no Conserved 108348967
chr19 954892 955141 EGR1 UCSC Txn Factor no Conserved 108348973
chr19 955297 955546 PAX5 UCSC Txn Factor no Conserved 108349019
chr19 954895 954910 TFAP2C JASPAR yes 70778150
chr19 954895 954910 TFAP2C JASPAR yes 111987063
chr19 954897 954912 TFAP2A JASPAR yes 70778151
chr19 954897 954912 TFAP2A JASPAR yes 111987064
chr19 954897 954914 RARA JASPAR yes 70778152
chr19 954897 954914 RARA JASPAR yes 111987065
chr19 954898 954909 EBF1 JASPAR yes 70778153
chr19 954898 954909 EBF1 JASPAR yes 111987066
chr19 954899 954908 TFAP2A JASPAR yes 70778154
chr19 954899 954908 TFAP2A JASPAR yes 111987067
chr19 954905 954918 NR2F1 JASPAR yes 70778155
chr19 954905 954918 NR2F1 JASPAR yes 111987068
chr19 954908 954925 RXRA JASPAR yes 70778156
chr19 954908 954925 RXRA JASPAR yes 111987069
chr19 954909 954913 ESR1 TRANSFAC yes 70778157
chr19 954909 954913 ESR1 TRANSFAC yes 111987070
chr19 954913 954918 SP1 TRANSFAC yes 70778158
chr19 954913 954918 SP1 TRANSFAC yes 111987071
chr19 954939 954947 GATA3 JASPAR yes 70778159
chr19 954939 954947 GATA3 JASPAR yes 111987072
chr19 954955 954969 EBF1 JASPAR yes 70778160
chr19 954955 954969 EBF1 JASPAR yes 111987073
chr19 954957 954968 EBF1 JASPAR yes 70778161
chr19 954957 954968 EBF1 JASPAR yes 111987074
chr19 954961 954966 TFAP2A TRANSFAC yes 70778162
chr19 954961 954966 TFAP2A TRANSFAC yes 111987075
chr19 954961 954967 MZF1 JASPAR yes 70778163
chr19 954961 954967 MZF1 JASPAR yes 111987076
chr19 954963 954969 MAZ TRANSFAC yes 70778164
chr19 954963 954969 MAZ TRANSFAC yes 111987077
chr19 954967 954977 NFKB1 JASPAR yes 70778165
chr19 954967 954977 RELA JASPAR yes 70778166
chr19 954967 954977 REL JASPAR yes 70778167
chr19 954967 954977 NFKB1 JASPAR yes 111987078
chr19 954967 954977 RELA JASPAR yes 111987079
chr19 954967 954977 REL JASPAR yes 111987080
chr19 954967 954978 NFKB1 JASPAR yes 70778168
chr19 954967 954978 NFKB1 JASPAR yes 111987081
chr19 954967 954982 HSF1 JASPAR yes 70778169
chr19 954967 954982 HSF1 JASPAR yes 111987082
chr19 954972 954978 ETS1 JASPAR yes 70778170
chr19 954972 954978 ETS1 JASPAR yes 111987083
chr19 954988 954992 H1TF2 TRANSFAC yes 70778171
chr19 954988 954992 NFE TRANSFAC yes 70778172
chr19 954988 954992 SRF TRANSFAC yes 70778173
chr19 954988 954992 H1TF2 TRANSFAC yes 111987084
chr19 954988 954992 NFE TRANSFAC yes 111987085
chr19 954988 954992 SRF TRANSFAC yes 111987086
chr19 955012 955032 RREB1 JASPAR yes 70778174
chr19 955012 955032 RREB1 JASPAR yes 111987087
chr19 955014 955034 RREB1 JASPAR yes 70778175
chr19 955014 955034 RREB1 JASPAR yes 111987088
chr19 955016 955036 RREB1 JASPAR yes 70778176
chr19 955016 955036 RREB1 JASPAR yes 111987089
chr19 955017 955031 PLAG1 JASPAR yes 70778177
chr19 955017 955031 PLAG1 JASPAR yes 111987090
chr19 955018 955033 RUNX2 JASPAR yes 70778178
chr19 955018 955033 RUNX2 JASPAR yes 111987091
chr19 955025 955037 ZBTB7A JASPAR yes 70778179
chr19 955025 955037 ZBTB7A JASPAR yes 111987092
chr19 955027 955032 SP1 TRANSFAC yes 70778180
chr19 955027 955032 SP1 TRANSFAC yes 111987093
chr19 955030 955035 SP1 TRANSFAC yes 70778181
chr19 955030 955035 SP1 TRANSFAC yes 111987094
chr19 955038 955043 H4TF1 TRANSFAC yes 70778182
chr19 955038 955043 H4TF1 TRANSFAC yes 111987095
chr19 955043 955059 ZNF143 JASPAR yes 70778183
chr19 955043 955059 ZNF143 JASPAR yes 111987096
chr19 955052 955064 CREB1 JASPAR yes 70778184
chr19 955052 955064 CREB1 JASPAR yes 111987097
chr19 955057 955062 ATF1 TRANSFAC yes 70778185
chr19 955057 955062 ATF1 TRANSFAC yes 111987098
chr19 955068 955082 NR2F1 JASPAR yes 70778186
chr19 955068 955082 NR2F1 JASPAR yes 111987099
chr19 955069 955079 SP1 JASPAR yes 70778187
chr19 955069 955079 SP1 JASPAR yes 111987100
chr19 955070 955074 LFA1 TRANSFAC yes 70778188
chr19 955070 955074 LFA1 TRANSFAC yes 111987101
chr19 955085 955106 REST JASPAR yes 70778189
chr19 955085 955106 REST JASPAR yes 111987102
chr19 955086 955105 REST JASPAR yes 70778190
chr19 955086 955105 REST JASPAR yes 111987103
chr19 955094 955103 ZEB1 JASPAR yes 70778191
chr19 955094 955103 ZEB1 JASPAR yes 111987104
chr19 955095 955105 TBR1 JASPAR yes 70778192
chr19 955095 955105 TBR1 JASPAR yes 111987105
chr19 955164 955178 GLIS2 JASPAR yes 70778193
chr19 955164 955178 GLIS2 JASPAR yes 111987106
chr19 955171 955189 ESR1 JASPAR yes 70778194
chr19 955171 955189 ESR1 JASPAR yes 111987107
chr19 955172 955177 SP1 TRANSFAC yes 70778195
chr19 955172 955177 SP1 TRANSFAC yes 111987108
chr19 955182 955193 YY2 JASPAR yes 70778196
chr19 955182 955193 YY2 JASPAR yes 111987109
chr19 955191 955195 LFA1 TRANSFAC yes 70778197
chr19 955191 955195 LFA1 TRANSFAC yes 111987110
chr19 955194 955214 ESR1 JASPAR yes 70778198
chr19 955194 955214 ESR1 JASPAR yes 111987111
chr19 955203 955208 MYC TRANSFAC yes 70778199
chr19 955203 955208 MYC TRANSFAC yes 111987112
chr19 955203 955215 HINFP JASPAR yes 70778200
chr19 955203 955215 HINFP JASPAR yes 111987113
chr19 955216 955226 MZF1 JASPAR yes 70778201
chr19 955216 955226 MZF1 JASPAR yes 111987114
chr19 955220 955235 TFAP2A JASPAR yes 70778202
chr19 955220 955235 TFAP2A JASPAR yes 111987115
chr19 955222 955237 TFAP2A JASPAR yes 70778203
chr19 955222 955237 TFAP2C JASPAR yes 70778204
chr19 955222 955237 TFAP2A JASPAR yes 111987116
chr19 955222 955237 TFAP2C JASPAR yes 111987117
chr19 955223 955234 EBF1 JASPAR yes 70778205
chr19 955223 955234 EBF1 JASPAR yes 111987118
chr19 955224 955233 TFAP2A JASPAR yes 70778206
chr19 955224 955233 TFAP2A JASPAR yes 111987119
chr19 955228 955233 SP1 TRANSFAC yes 70778207
chr19 955228 955233 SP1 TRANSFAC yes 111987120
chr19 955228 955246 ESR1 JASPAR yes 70778208
chr19 955228 955246 ESR1 JASPAR yes 111987121
chr19 955247 955264 ESR1 JASPAR yes 70778209
chr19 955247 955264 ESR1 JASPAR yes 111987122
chr19 955248 955254 SP1 TRANSFAC yes 70778210
chr19 955248 955254 SP1 TRANSFAC yes 111987123
chr19 955249 955254 SP1 TRANSFAC yes 70778211
chr19 955249 955254 SP1 TRANSFAC yes 111987124
chr19 955250 955255 SP1 TRANSFAC yes 70778212
chr19 955250 955255 SP1 TRANSFAC yes 111987125
chr19 955250 955256 SP1 TRANSFAC yes 70778213
chr19 955250 955256 SP1 TRANSFAC yes 111987126
chr19 955253 955264 NFKB1 JASPAR yes 70778214
chr19 955253 955264 NFKB1 JASPAR yes 111987127
chr19 955254 955273 CTCF JASPAR yes 70778215
chr19 955254 955273 CTCF JASPAR yes 111987128
chr19 955256 955268 ZBTB7B JASPAR yes 70778216
chr19 955256 955268 ZBTB7B JASPAR yes 111987129
chr19 955257 955267 ZNF740 JASPAR yes 70778217
chr19 955257 955267 ZNF740 JASPAR yes 111987130
chr19 955257 955271 GLIS2 JASPAR yes 70778218
chr19 955257 955271 GLIS3 JASPAR yes 70778219
chr19 955257 955271 ZIC1 JASPAR yes 70778220
chr19 955257 955271 GLIS2 JASPAR yes 111987131
chr19 955257 955271 GLIS3 JASPAR yes 111987132
chr19 955257 955271 ZIC1 JASPAR yes 111987133
chr19 955257 955272 ZIC3 JASPAR yes 70778221
chr19 955257 955272 ZIC4 JASPAR yes 70778222
chr19 955257 955272 ZIC3 JASPAR yes 111987134
chr19 955257 955272 ZIC4 JASPAR yes 111987135
chr19 955260 955273 TFAP2A JASPAR yes 70778223
chr19 955260 955273 TFAP2A JASPAR yes 111987136
chr19 955282 955287 SP1 TRANSFAC yes 70778224
chr19 955282 955287 SP1 TRANSFAC yes 111987137
chr19 955291 955302 CDX2 JASPAR yes 70778225
chr19 955291 955302 CDX2 JASPAR yes 111987138
chr19 955291 955307 ZNF143 JASPAR yes 70778226
chr19 955291 955307 ZNF143 JASPAR yes 111987139
chr19 955293 955303 HOXA13 JASPAR yes 70778227
chr19 955293 955303 HOXB13 JASPAR yes 70778228
chr19 955293 955303 HOXA13 JASPAR yes 111987140
chr19 955293 955303 HOXB13 JASPAR yes 111987141
chr19 955305 955310 SP1 TRANSFAC yes 70778229
chr19 955305 955310 SP1 TRANSFAC yes 111987142
SNP sites on vista28126[chr19:954903-955312]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 954940 rs577850829 G A,C
EBF1 EGR1 GATA3 RUNX3 ZBTB7A
5370051
chr19 954977 rs557402676 C T
EBF1 EGR1 ETS1 HSF1 NFKB1 REL RELA RUNX3 ZBTB7A
5370052
chr19 955110 rs3746140 G T
EBF1 EGR1 RUNX3 ZBTB7A
5370053
chr19 955197 rs192804633 G A
EBF1 ESR1 RUNX3
5370054
chr19 955280 rs374748879 C A
RUNX3
5370055
Genes possibly regulated by vista28126[chr19:954903-955312]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 859453 863453 + CFD ENSG00000197766.3 859453 0.92 1.0 16721 4550
chr19 867962 893218 - MED16 ENSG00000175221.10 893218 0.58 1.0 16722 38315
chr19 896503 913240 - R3HDM4 ENSG00000198858.5 913240 0.74 1.0 16723 58337
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 62384
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 70878
chr19 983174 994569 + WDR18 ENSG00000065268.6 983174 0.85 1.0 16726 72138
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 55711
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 54894
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 34195
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 29014
chr19 1040102 1065571 + ABCA7 ENSG00000064687.8 1040102 0.85 1.0 16731 15210
Expression level of Genes
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miRNAs possibly regulated by vista28126[chr19:954903-955312]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results