EnhancerDB
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  3. vista28130[chr19:1016614-1016952]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28130[chr19:1016614-1016952]
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Tissue distribution of vista28130
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Transcription factor that possibly regulate vista28130[chr19:1016614-1016952]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1016799 1017415 ZNF263 UCSC Txn Factor no Conserved 108349587
chr19 1016651 1016655 H4TF2 TRANSFAC yes 70778364
chr19 1016651 1016655 H4TF2 TRANSFAC yes 111989151
chr19 1016670 1016683 JUN JASPAR yes 70778365
chr19 1016670 1016683 JUN JASPAR yes 111989152
chr19 1016673 1016686 NR2F1 JASPAR yes 70778366
chr19 1016673 1016686 NR2F1 JASPAR yes 111989153
chr19 1016674 1016682 CREB1 JASPAR yes 70778367
chr19 1016674 1016682 CREB1 JASPAR yes 111989154
chr19 1016675 1016683 NR4A2 JASPAR yes 70778368
chr19 1016675 1016683 NR4A2 JASPAR yes 111989155
chr19 1016676 1016691 ESR2 JASPAR yes 70778369
chr19 1016676 1016691 ESR2 JASPAR yes 111989156
chr19 1016677 1016681 ESR1 TRANSFAC yes 70778370
chr19 1016677 1016681 ESR1 TRANSFAC yes 111989157
chr19 1016677 1016687 MAX JASPAR yes 70778371
chr19 1016677 1016687 MAX JASPAR yes 111989158
chr19 1016677 1016688 USF1 JASPAR yes 70778372
chr19 1016677 1016688 USF2 JASPAR yes 70778373
chr19 1016677 1016688 USF1 JASPAR yes 111989159
chr19 1016677 1016688 USF2 JASPAR yes 111989160
chr19 1016678 1016688 TFEB JASPAR yes 70778374
chr19 1016678 1016688 TFEC JASPAR yes 70778375
chr19 1016678 1016688 TFEB JASPAR yes 111989161
chr19 1016678 1016688 TFEC JASPAR yes 111989162
chr19 1016689 1016700 E2F6 JASPAR yes 70778376
chr19 1016689 1016700 E2F6 JASPAR yes 111989163
chr19 1016691 1016699 SP1 TRANSFAC yes 70778377
chr19 1016691 1016699 SP1 TRANSFAC yes 111989164
chr19 1016691 1016701 SP1 JASPAR yes 70778378
chr19 1016691 1016701 SP1 JASPAR yes 111989165
chr19 1016693 1016699 MAZ TRANSFAC yes 70778379
chr19 1016693 1016699 MAZ TRANSFAC yes 111989166
chr19 1016697 1016702 SP1 TRANSFAC yes 70778380
chr19 1016697 1016702 SP1 TRANSFAC yes 111989167
chr19 1016704 1016708 LFA1 TRANSFAC yes 70778381
chr19 1016704 1016708 LFA1 TRANSFAC yes 111989168
chr19 1016721 1016729 BARX1 JASPAR yes 70778382
chr19 1016721 1016729 BARX1 JASPAR yes 111989169
chr19 1016729 1016742 TFAP2A JASPAR yes 70778383
chr19 1016729 1016742 TFAP2B JASPAR yes 70778384
chr19 1016729 1016742 TFAP2C JASPAR yes 70778385
chr19 1016729 1016742 TFAP2A JASPAR yes 111989170
chr19 1016729 1016742 TFAP2B JASPAR yes 111989171
chr19 1016729 1016742 TFAP2C JASPAR yes 111989172
chr19 1016738 1016743 ETS2 TRANSFAC yes 70778386
chr19 1016738 1016743 ETS2 TRANSFAC yes 111989173
chr19 1016752 1016771 RFX2 JASPAR yes 70778387
chr19 1016752 1016771 RFX2 JASPAR yes 111989174
chr19 1016760 1016769 TFAP2A JASPAR yes 70778388
chr19 1016760 1016769 TFAP2A JASPAR yes 111989175
chr19 1016764 1016774 SP1 JASPAR yes 70778389
chr19 1016764 1016774 SP1 JASPAR yes 111989176
chr19 1016764 1016784 ESR1 JASPAR yes 70778390
chr19 1016764 1016784 ESR1 JASPAR yes 111989177
chr19 1016765 1016769 LFA1 TRANSFAC yes 70778391
chr19 1016765 1016769 LFA1 TRANSFAC yes 111989178
chr19 1016765 1016785 ESR1 JASPAR yes 70778392
chr19 1016765 1016785 ESR1 JASPAR yes 111989179
chr19 1016768 1016786 ESR2 JASPAR yes 70778393
chr19 1016768 1016786 ESR2 JASPAR yes 111989180
chr19 1016770 1016785 ESR2 JASPAR yes 70778394
chr19 1016770 1016785 ESR2 JASPAR yes 111989181
chr19 1016771 1016775 ESR1 TRANSFAC yes 70778395
chr19 1016771 1016775 ESR1 TRANSFAC yes 111989182
chr19 1016780 1016784 H4TF2 TRANSFAC yes 70778396
chr19 1016780 1016784 H4TF2 TRANSFAC yes 111989183
chr19 1016783 1016794 ESRRA JASPAR yes 70778397
chr19 1016783 1016794 ESRRA JASPAR yes 111989184
chr19 1016783 1016796 NR2F1 JASPAR yes 70778398
chr19 1016783 1016796 NR2F1 JASPAR yes 111989185
chr19 1016787 1016791 ESR1 TRANSFAC yes 70778399
chr19 1016787 1016791 ESR1 TRANSFAC yes 111989186
chr19 1016787 1016799 INSM1 JASPAR yes 70778400
chr19 1016787 1016799 INSM1 JASPAR yes 111989187
chr19 1016790 1016801 E2F4 JASPAR yes 70778401
chr19 1016790 1016801 E2F4 JASPAR yes 111989188
chr19 1016790 1016805 NR2C2 JASPAR yes 70778402
chr19 1016790 1016805 NR2C2 JASPAR yes 111989189
chr19 1016800 1016804 LFA1 TRANSFAC yes 70778403
chr19 1016800 1016804 LFA1 TRANSFAC yes 111989190
chr19 1016829 1016849 ESR1 JASPAR yes 70778404
chr19 1016829 1016849 ESR1 JASPAR yes 111989191
chr19 1016834 1016842 MGA JASPAR yes 70778405
chr19 1016834 1016842 MGA JASPAR yes 111989192
chr19 1016861 1016873 HINFP JASPAR yes 70778406
chr19 1016861 1016873 HINFP JASPAR yes 111989193
chr19 1016863 1016873 HINFP JASPAR yes 70778407
chr19 1016863 1016873 HINFP JASPAR yes 111989194
chr19 1016878 1016882 LFA1 TRANSFAC yes 70778408
chr19 1016878 1016882 LFA1 TRANSFAC yes 111989195
chr19 1016887 1016895 FOXO3 JASPAR yes 70778409
chr19 1016887 1016895 FOXO3 JASPAR yes 111989196
chr19 1016888 1016901 EOMES JASPAR yes 70778410
chr19 1016888 1016901 EOMES JASPAR yes 111989197
chr19 1016900 1016914 MTF1 JASPAR yes 70778411
chr19 1016900 1016914 MTF1 JASPAR yes 111989198
chr19 1016938 1016952 JUN JASPAR yes 70778412
chr19 1016938 1016952 JUN JASPAR yes 111989199
chr19 1016940 1016951 BATF JASPAR yes 70778413
chr19 1016940 1016951 BATF JASPAR yes 111989200
chr19 1016941 1016952 FOSL2 JASPAR yes 70778414
chr19 1016941 1016952 JUNB JASPAR yes 70778415
chr19 1016941 1016952 FOSL2 JASPAR yes 111989201
chr19 1016941 1016952 JUNB JASPAR yes 111989202
chr19 1016942 1016953 FOS JASPAR yes 70778416
chr19 1016942 1016953 FOSL1 JASPAR yes 70778417
chr19 1016942 1016953 JUND JASPAR yes 70778418
chr19 1016942 1016953 FOS JASPAR yes 111989203
chr19 1016942 1016953 FOSL1 JASPAR yes 111989204
chr19 1016942 1016953 JUND JASPAR yes 111989205
chr19 1016943 1016952 JDP2 JASPAR yes 70778419
chr19 1016943 1016952 JDP2 JASPAR yes 111989206
chr19 1016943 1016957 JUN JASPAR yes 70778420
chr19 1016943 1016957 JUN JASPAR yes 111989207
chr19 1016950 1016958 CREB1 JASPAR yes 70778421
chr19 1016950 1016958 CREB1 JASPAR yes 111989208
chr19 1016951 1016963 CREB1 JASPAR yes 70778422
chr19 1016951 1016963 CREB1 JASPAR yes 111989209
chr19 1016952 1016957 ATF1 TRANSFAC yes 70778423
chr19 1016952 1016957 ATF1 TRANSFAC yes 111989210
SNP sites on vista28130[chr19:1016614-1016952]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1016648 rs553133681 C A,T no 5370653
chr19 1016718 rs56126437 C T no 5370654
chr19 1016849 rs113356551 C A,T
ESR1 ZNF263
5370655
chr19 1016879 rs78430277 G C
LFA1 ZNF263
5370656
Genes possibly regulated by vista28130[chr19:1016614-1016952]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 917287 921015 + KISS1R ENSG00000116014.5 917287 0.93 1.0 16724 673
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0.81 1.0 16725 9167
chr19 983174 994569 + WDR18 ENSG00000065268.6 983174 0.85 1.0 16726 66560
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 82987
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 83804
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 95835
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 90654
chr19 1040102 1065571 + ABCA7 ENSG00000064687.8 1040102 0.85 1.0 16731 76850
chr19 1065922 1086627 + HMHA1 ENSG00000180448.6 1065922 0.89 1.0 16732 51030
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 21354
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 13016
Expression level of Genes
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miRNAs possibly regulated by vista28130[chr19:1016614-1016952]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results