EnhancerDB
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  3. vista28133[chr19:1085284-1085426]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28133[chr19:1085284-1085426]
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Tissue distribution of vista28133
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Transcription factor that possibly regulate vista28133[chr19:1085284-1085426]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1083957 1090459 POLR2A UCSC Txn Factor no Conserved 108349941
chr19 1085284 1085288 NFE TRANSFAC yes 70778666
chr19 1085284 1085288 NFE TRANSFAC yes 111991697
chr19 1085328 1085349 ZNF263 JASPAR yes 70778667
chr19 1085328 1085349 ZNF263 JASPAR yes 111991698
chr19 1085340 1085351 E2F6 JASPAR yes 70778668
chr19 1085340 1085351 E2F6 JASPAR yes 111991699
chr19 1085343 1085360 ZNF410 JASPAR yes 70778669
chr19 1085343 1085360 ZNF410 JASPAR yes 111991700
chr19 1085352 1085362 MAX JASPAR yes 70778670
chr19 1085352 1085362 MAX JASPAR yes 111991701
chr19 1085353 1085363 CLOCK JASPAR yes 70778671
chr19 1085353 1085363 MAX JASPAR yes 70778672
chr19 1085353 1085363 CLOCK JASPAR yes 111991702
chr19 1085353 1085363 MAX JASPAR yes 111991703
chr19 1085355 1085360 MYC TRANSFAC yes 70778673
chr19 1085355 1085360 USF1 TRANSFAC yes 70778674
chr19 1085355 1085360 USF2 TRANSFAC yes 70778675
chr19 1085355 1085360 MYC TRANSFAC yes 111991704
chr19 1085355 1085360 USF1 TRANSFAC yes 111991705
chr19 1085355 1085360 USF2 TRANSFAC yes 111991706
chr19 1085355 1085362 USF1 JASPAR yes 70778676
chr19 1085355 1085362 USF1 JASPAR yes 111991707
chr19 1085358 1085374 ZNF143 JASPAR yes 70778677
chr19 1085358 1085374 ZNF143 JASPAR yes 111991708
chr19 1085391 1085396 SP1 TRANSFAC yes 70778678
chr19 1085391 1085396 SP1 TRANSFAC yes 111991709
chr19 1085393 1085398 TFAP2A TRANSFAC yes 70778679
chr19 1085393 1085398 TFAP2A TRANSFAC yes 111991710
chr19 1085393 1085399 MZF1 JASPAR yes 70778680
chr19 1085393 1085399 MZF1 JASPAR yes 111991711
chr19 1085413 1085417 NFE TRANSFAC yes 70778681
chr19 1085413 1085417 NFE TRANSFAC yes 111991712
chr19 1085413 1085434 ZNF263 JASPAR yes 70778682
chr19 1085413 1085434 ZNF263 JASPAR yes 111991713
chr19 1085422 1085443 ZNF263 JASPAR yes 70778683
chr19 1085422 1085443 ZNF263 JASPAR yes 111991714
chr19 1085425 1085446 ZNF263 JASPAR yes 70778684
chr19 1085425 1085446 ZNF263 JASPAR yes 111991715
SNP sites on vista28133[chr19:1085284-1085426]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1085398 rs372652936 GAC G
MZF1 POLR2A TFAP2A
5371397
Genes possibly regulated by vista28133[chr19:1085284-1085426]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 999601 999952 + AC004528.1 ENSG00000269169.1 999601 0.0 0.0 16727 14317
chr19 1000418 1009731 + GRIN3B ENSG00000116032.5 1000418 0.81 1.0 16728 15134
chr19 1009647 1021117 - TMEM259 ENSG00000182087.8 1021117 0.65 1.0 16729 35833
chr19 1026298 1039068 + CNN2 ENSG00000064666.10 1026298 0.77 1.0 16730 41014
chr19 1040102 1065571 + ABCA7 ENSG00000064687.8 1040102 0.85 1.0 16731 54818
chr19 1065922 1086627 + HMHA1 ENSG00000180448.6 1065922 0.89 1.0 16732 80638
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 89828
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 81490
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 11144
Expression level of Genes
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miRNAs possibly regulated by vista28133[chr19:1085284-1085426]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results