EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr19	1133257	1134601	POLR2A	UCSC Txn Factor	no	Conserved	108350333
chr19	1133257	1134601	POLR2A	UCSC Txn Factor	no	Conserved	108350334
chr19	1133568	1133908	SP1	UCSC Txn Factor	no	Conserved	108350382
chr19	1133574	1133979	NFYB	UCSC Txn Factor	no	Conserved	108350385
chr19	1133607	1133877	FOS	UCSC Txn Factor	no	Conserved	108350390
chr19	1133735	1134000	RUNX3	UCSC Txn Factor	no	Conserved	108350400
chr19	1133543	1133547	NFE	TRANSFAC	yes		70778789
chr19	1133565	1133579	RXRB	JASPAR	yes		70778790
chr19	1133565	1133579	RXRG	JASPAR	yes		70778791
chr19	1133570	1133589	CTCF	JASPAR	yes		70778792
chr19	1133581	1133591	SP1	JASPAR	yes		70778793
chr19	1133601	1133605	H4TF2	TRANSFAC	yes		70778794
chr19	1133607	1133620	TFAP2A	JASPAR	yes		70778795
chr19	1133607	1133620	TFAP2B	JASPAR	yes		70778796
chr19	1133607	1133620	TFAP2C	JASPAR	yes		70778797
chr19	1133621	1133626	SP1	TRANSFAC	yes		70778798
chr19	1133627	1133644	BCL6B	JASPAR	yes		70778799
chr19	1133639	1133647	SP1	TRANSFAC	yes		70778800
chr19	1133639	1133649	SP1	JASPAR	yes		70778801
chr19	1133640	1133646	SP1	TRANSFAC	yes		70778802
chr19	1133642	1133647	SP1	TRANSFAC	yes		70778803
chr19	1133642	1133654	E2F8	JASPAR	yes		70778804
chr19	1133644	1133660	NFYA	JASPAR	yes		70778805
chr19	1133649	1133653	H1TF2	TRANSFAC	yes		70778806
chr19	1133649	1133653	NFE	TRANSFAC	yes		70778807
chr19	1133649	1133653	SRF	TRANSFAC	yes		70778808
chr19	1133650	1133665	FOXP1	JASPAR	yes		70778809
chr19	1133651	1133661	NFATC3	JASPAR	yes		70778810
chr19	1133653	1133660	NFATC2	JASPAR	yes		70778811
chr19	1133654	1133662	FOXO3	JASPAR	yes		70778812
chr19	1133656	1133671	NFYB	JASPAR	yes		70778813
chr19	1133658	1133674	NFYA	JASPAR	yes		70778814
chr19	1133663	1133667	H1TF2	TRANSFAC	yes		70778815
chr19	1133663	1133667	NFE	TRANSFAC	yes		70778816
chr19	1133663	1133667	SRF	TRANSFAC	yes		70778817
chr19	1133663	1133677	SPI1	JASPAR	yes		70778818
chr19	1133663	1133677	SPIC	JASPAR	yes		70778819
chr19	1133667	1133672	TFAP2A	TRANSFAC	yes		70778820
chr19	1133667	1133673	MZF1	JASPAR	yes		70778821
chr19	1133669	1133674	ETS2	TRANSFAC	yes		70778822
chr19	1133696	1133711	NFYB	JASPAR	yes		70778823
chr19	1133698	1133714	NFYA	JASPAR	yes		70778824
chr19	1133699	1133717	NFYA	JASPAR	yes		70778825
chr19	1133703	1133707	H1TF2	TRANSFAC	yes		70778826
chr19	1133703	1133707	NFE	TRANSFAC	yes		70778827
chr19	1133703	1133707	SRF	TRANSFAC	yes		70778828
chr19	1133725	1133740	NFYB	JASPAR	yes		70778829
chr19	1133727	1133743	NFYA	JASPAR	yes		70778830
chr19	1133728	1133746	NFYA	JASPAR	yes		70778831
chr19	1133732	1133736	H1TF2	TRANSFAC	yes		70778832
chr19	1133732	1133736	NFE	TRANSFAC	yes		70778833
chr19	1133732	1133736	SRF	TRANSFAC	yes		70778834
chr19	1133754	1133769	NFYB	JASPAR	yes		70778835
chr19	1133756	1133772	NFYA	JASPAR	yes		70778836
chr19	1133757	1133775	NFYA	JASPAR	yes		70778837
chr19	1133761	1133765	H1TF2	TRANSFAC	yes		70778838
chr19	1133761	1133765	NFE	TRANSFAC	yes		70778839
chr19	1133761	1133765	SRF	TRANSFAC	yes		70778840
chr19	1133783	1133798	NFYB	JASPAR	yes		70778841
chr19	1133785	1133801	NFYA	JASPAR	yes		70778842
chr19	1133786	1133804	NFYA	JASPAR	yes		70778843
chr19	1133790	1133794	H1TF2	TRANSFAC	yes		70778844
chr19	1133790	1133794	NFE	TRANSFAC	yes		70778845
chr19	1133790	1133794	SRF	TRANSFAC	yes		70778846
chr19	1133799	1133820	REST	JASPAR	yes		70778847
chr19	1133831	1133851	RREB1	JASPAR	yes		70778848
chr19	1133835	1133855	RREB1	JASPAR	yes		70778849
chr19	1133838	1133853	RUNX2	JASPAR	yes		70778850
chr19	1133838	1133858	RREB1	JASPAR	yes		70778851
chr19	1133844	1133859	RUNX2	JASPAR	yes		70778852
chr19	1133845	1133854	RUNX2	JASPAR	yes		70778853
chr19	1133845	1133855	RUNX3	JASPAR	yes		70778854

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr19	1133696	rs572048552	T	C,G	FOS NFYB POLR2A SP1	5372153
chr19	1133718	rs557804226	C	T	FOS NFYB POLR2A SP1	5372154
chr19	1133734	rs576081025	C	T	FOS H1TF2 NFE NFYA NFYB POLR2A SP1 SRF	5372155
chr19	1133748	rs541608599	G	A	FOS NFYB POLR2A RUNX3 SP1	5372156
chr19	1133818	rs113675022	T	G	FOS NFYB POLR2A REST RUNX3 SP1	5372157
chr19	1133833	rs78468943	C	A,G	FOS NFYB POLR2A RREB1 RUNX3 SP1	5372158

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id
chr19	1040102	1065571	+	ABCA7	ENSG00000064687.8	1040102	0.85	1.0	16731	6560
chr19	1065922	1086627	+	HMHA1	ENSG00000180448.6	1065922	0.89	1.0	16732	32380
chr19	1086594	1095598	-	POLR2E	ENSG00000099817.7	1095598	0.68	1.0	16733	62056
chr19	1103936	1106787	+	GPX4	ENSG00000167468.12	1103936	0.68	1.0	16734	70394
chr19	1107636	1174282	-	SBNO2	ENSG00000064932.11	1174282	0.75	1.0	16735	59583
chr19	1189406	1228428	+	STK11	ENSG00000118046.10	1189406	0.59	1.0	16736	44459

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista28137[chr19:1133542-1133865]

Tissue distribution of vista28137

Transcription factor that possibly regulate vista28137[chr19:1133542-1133865]

SNP sites on vista28137[chr19:1133542-1133865]

Genes possibly regulated by vista28137[chr19:1133542-1133865]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista28137[chr19:1133542-1133865]

Details of miRNAs

Expression level of miRNAs