EnhancerDB
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  3. vista28140[chr19:1152270-1152379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28140[chr19:1152270-1152379]
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Tissue distribution of vista28140
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Transcription factor that possibly regulate vista28140[chr19:1152270-1152379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1152269 1152273 NFE TRANSFAC yes 70778949
chr19 1152269 1152273 NFE TRANSFAC yes 111995325
chr19 1152276 1152293 ZNF410 JASPAR yes 70778950
chr19 1152276 1152293 ZNF410 JASPAR yes 111995326
chr19 1152279 1152295 ZNF143 JASPAR yes 70778951
chr19 1152279 1152295 ZNF143 JASPAR yes 111995327
chr19 1152285 1152296 PROP1 JASPAR yes 70778952
chr19 1152285 1152296 PROP1 JASPAR yes 111995328
chr19 1152291 1152306 HNF1A JASPAR yes 70778953
chr19 1152291 1152306 HNF1A JASPAR yes 111995329
chr19 1152292 1152302 HOXB2 JASPAR yes 70778954
chr19 1152292 1152302 HOXB3 JASPAR yes 70778955
chr19 1152292 1152302 MNX1 JASPAR yes 70778956
chr19 1152292 1152302 POU6F1 JASPAR yes 70778957
chr19 1152292 1152302 HOXB2 JASPAR yes 111995330
chr19 1152292 1152302 HOXB3 JASPAR yes 111995331
chr19 1152292 1152302 MNX1 JASPAR yes 111995332
chr19 1152292 1152302 POU6F1 JASPAR yes 111995333
chr19 1152292 1152305 HNF1B JASPAR yes 70778958
chr19 1152292 1152305 HNF1B JASPAR yes 111995334
chr19 1152293 1152301 LMX1A JASPAR yes 70778959
chr19 1152293 1152301 LMX1B JASPAR yes 70778960
chr19 1152293 1152301 NKX6-1 JASPAR yes 70778961
chr19 1152293 1152301 NKX6-2 JASPAR yes 70778962
chr19 1152293 1152301 VAX1 JASPAR yes 70778963
chr19 1152293 1152301 VAX2 JASPAR yes 70778964
chr19 1152293 1152301 VSX1 JASPAR yes 70778965
chr19 1152293 1152301 VSX2 JASPAR yes 70778966
chr19 1152293 1152301 LMX1A JASPAR yes 111995335
chr19 1152293 1152301 LMX1B JASPAR yes 111995336
chr19 1152293 1152301 NKX6-1 JASPAR yes 111995337
chr19 1152293 1152301 NKX6-2 JASPAR yes 111995338
chr19 1152293 1152301 VAX1 JASPAR yes 111995339
chr19 1152293 1152301 VAX2 JASPAR yes 111995340
chr19 1152293 1152301 VSX1 JASPAR yes 111995341
chr19 1152293 1152301 VSX2 JASPAR yes 111995342
chr19 1152298 1152302 YY1 TRANSFAC yes 70778967
chr19 1152298 1152302 YY1 TRANSFAC yes 111995343
chr19 1152302 1152308 MZF1 JASPAR yes 70778968
chr19 1152302 1152308 MZF1 JASPAR yes 111995344
chr19 1152306 1152311 MYC TRANSFAC yes 70778969
chr19 1152306 1152311 MYC TRANSFAC yes 111995345
chr19 1152306 1152320 PLAG1 JASPAR yes 70778970
chr19 1152306 1152320 PLAG1 JASPAR yes 111995346
chr19 1152311 1152326 TFAP2A JASPAR yes 70778971
chr19 1152311 1152326 TFAP2A JASPAR yes 111995347
chr19 1152316 1152327 EBF1 JASPAR yes 70778972
chr19 1152316 1152327 EBF1 JASPAR yes 111995348
chr19 1152320 1152325 TFAP2A TRANSFAC yes 70778973
chr19 1152320 1152325 TFAP2A TRANSFAC yes 111995349
chr19 1152320 1152326 MZF1 JASPAR yes 70778974
chr19 1152320 1152326 MZF1 JASPAR yes 111995350
chr19 1152322 1152332 RELA JASPAR yes 70778975
chr19 1152322 1152332 REL JASPAR yes 70778976
chr19 1152322 1152332 RELA JASPAR yes 111995351
chr19 1152322 1152332 REL JASPAR yes 111995352
chr19 1152322 1152333 NFKB1 JASPAR yes 70778977
chr19 1152322 1152333 NFKB1 JASPAR yes 111995353
chr19 1152331 1152342 FLI1 JASPAR yes 70778978
chr19 1152331 1152342 FLI1 JASPAR yes 111995354
chr19 1152333 1152347 E2F7 JASPAR yes 70778979
chr19 1152333 1152347 E2F7 JASPAR yes 111995355
chr19 1152342 1152357 MEF2A JASPAR yes 70778980
chr19 1152342 1152357 MEF2A JASPAR yes 111995356
chr19 1152343 1152355 MEF2A JASPAR yes 70778981
chr19 1152343 1152355 MEF2B JASPAR yes 70778982
chr19 1152343 1152355 MEF2D JASPAR yes 70778983
chr19 1152343 1152355 MEF2A JASPAR yes 111995357
chr19 1152343 1152355 MEF2B JASPAR yes 111995358
chr19 1152343 1152355 MEF2D JASPAR yes 111995359
chr19 1152344 1152354 MEF2A JASPAR yes 70778984
chr19 1152344 1152354 MEF2A JASPAR yes 111995360
chr19 1152345 1152349 TEAD2 TRANSFAC yes 70778985
chr19 1152345 1152349 TEAD2 TRANSFAC yes 111995361
chr19 1152345 1152350 TBP TRANSFAC yes 70778986
chr19 1152345 1152350 TBP TRANSFAC yes 111995362
chr19 1152345 1152351 TMF TRANSFAC yes 70778987
chr19 1152345 1152351 TMF TRANSFAC yes 111995363
chr19 1152357 1152378 ZNF263 JASPAR yes 70778988
chr19 1152357 1152378 ZNF263 JASPAR yes 111995364
chr19 1152361 1152365 NFE TRANSFAC yes 70778989
chr19 1152361 1152365 NFE TRANSFAC yes 111995365
chr19 1152365 1152375 MZF1 JASPAR yes 70778990
chr19 1152365 1152375 MZF1 JASPAR yes 111995366
chr19 1152368 1152374 SP1 TRANSFAC yes 70778991
chr19 1152368 1152374 SP1 TRANSFAC yes 111995367
chr19 1152368 1152378 SP1 JASPAR yes 70778992
chr19 1152368 1152378 SP1 JASPAR yes 111995368
chr19 1152369 1152380 E2F6 JASPAR yes 70778993
chr19 1152369 1152380 E2F6 JASPAR yes 111995369
chr19 1152379 1152388 PITX3 JASPAR yes 70778994
chr19 1152379 1152388 PITX3 JASPAR yes 111995370
SNP sites on vista28140[chr19:1152270-1152379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1152310 rs12976934 C A,T
MYC PLAG1
5372387
chr19 1152313 rs75101177 A G
PLAG1 TFAP2A
5372388
chr19 1152379 rs181720035 C T
E2F6 PITX3
5372389
Genes possibly regulated by vista28140[chr19:1152270-1152379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1065922 1086627 + HMHA1 ENSG00000180448.6 1065922 0.89 1.0 16732 13652
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 43328
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 51666
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 78097
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 62973
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 14353
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 10630
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 3827
Expression level of Genes
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miRNAs possibly regulated by vista28140[chr19:1152270-1152379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results