EnhancerDB
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  3. vista28142[chr19:1169743-1170349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28142[chr19:1169743-1170349]
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Tissue distribution of vista28142
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Transcription factor that possibly regulate vista28142[chr19:1169743-1170349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1168832 1170449 POLR2A UCSC Txn Factor no Conserved 108350524
chr19 1169873 1170176 USF2 UCSC Txn Factor no Conserved 108350615
chr19 1169875 1170182 USF1 UCSC Txn Factor no Conserved 108350617
chr19 1169899 1170195 MAX UCSC Txn Factor no Conserved 108350628
chr19 1169942 1170176 BHLHE40 UCSC Txn Factor no Conserved 108350638
chr19 1169973 1170277 GATA2 UCSC Txn Factor no Conserved 108350644
chr19 1170326 1170649 ESR1 UCSC Txn Factor no Conserved 108350666
chr19 1169735 1169750 AR JASPAR yes 70779070
chr19 1169735 1169750 AR JASPAR yes 111997568
chr19 1169742 1169763 IRF1 JASPAR yes 70779071
chr19 1169742 1169763 IRF1 JASPAR yes 111997569
chr19 1169761 1169779 IRF2 JASPAR yes 70779072
chr19 1169761 1169779 IRF2 JASPAR yes 111997570
chr19 1169762 1169783 IRF1 JASPAR yes 70779073
chr19 1169762 1169783 IRF1 JASPAR yes 111997571
chr19 1169764 1169779 PRDM1 JASPAR yes 70779074
chr19 1169764 1169779 STAT2 JASPAR yes 70779075
chr19 1169764 1169779 PRDM1 JASPAR yes 111997572
chr19 1169764 1169779 STAT2 JASPAR yes 111997573
chr19 1169765 1169779 STAT1 JASPAR yes 70779076
chr19 1169765 1169779 STAT1 JASPAR yes 111997574
chr19 1169766 1169778 IRF1 JASPAR yes 70779077
chr19 1169766 1169778 IRF1 JASPAR yes 111997575
chr19 1169766 1169780 IRF7 JASPAR yes 70779078
chr19 1169766 1169780 IRF7 JASPAR yes 111997576
chr19 1169766 1169781 IRF9 JASPAR yes 70779079
chr19 1169766 1169781 IRF9 JASPAR yes 111997577
chr19 1169771 1169775 YY1 TRANSFAC yes 70779080
chr19 1169771 1169775 YY1 TRANSFAC yes 111997578
chr19 1169785 1169796 FOXH1 JASPAR yes 70779081
chr19 1169785 1169796 FOXH1 JASPAR yes 111997579
chr19 1169789 1169795 ZNF354C JASPAR yes 70779082
chr19 1169789 1169795 ZNF354C JASPAR yes 111997580
chr19 1169792 1169806 ZIC1 JASPAR yes 70779083
chr19 1169792 1169806 ZIC1 JASPAR yes 111997581
chr19 1169803 1169807 LFA1 TRANSFAC yes 70779084
chr19 1169803 1169807 LFA1 TRANSFAC yes 111997582
chr19 1169804 1169814 HEY2 JASPAR yes 70779085
chr19 1169804 1169814 ID4 JASPAR yes 70779086
chr19 1169804 1169814 TCF4 JASPAR yes 70779087
chr19 1169804 1169814 HEY2 JASPAR yes 111997583
chr19 1169804 1169814 ID4 JASPAR yes 111997584
chr19 1169804 1169814 TCF4 JASPAR yes 111997585
chr19 1169805 1169814 SNAI2 JASPAR yes 70779088
chr19 1169805 1169814 SNAI2 JASPAR yes 111997586
chr19 1169806 1169811 USF2 TRANSFAC yes 70779089
chr19 1169806 1169811 USF2 TRANSFAC yes 111997587
chr19 1169809 1169813 NFE TRANSFAC yes 70779090
chr19 1169809 1169813 NFE TRANSFAC yes 111997588
chr19 1169817 1169831 JUN JASPAR yes 70779091
chr19 1169817 1169831 JUN JASPAR yes 111997589
chr19 1169819 1169830 BATF JASPAR yes 70779092
chr19 1169819 1169830 BATF JASPAR yes 111997590
chr19 1169820 1169831 JUNB JASPAR yes 70779093
chr19 1169820 1169831 JUNB JASPAR yes 111997591
chr19 1169821 1169832 FOS JASPAR yes 70779094
chr19 1169821 1169832 FOSL1 JASPAR yes 70779095
chr19 1169821 1169832 FOS JASPAR yes 111997592
chr19 1169821 1169832 FOSL1 JASPAR yes 111997593
chr19 1169822 1169831 JDP2 JASPAR yes 70779096
chr19 1169822 1169831 JDP2 JASPAR yes 111997594
chr19 1169872 1169885 HSF2 JASPAR yes 70779097
chr19 1169872 1169885 HSF2 JASPAR yes 111997595
chr19 1169878 1169888 TEAD1 JASPAR yes 70779098
chr19 1169878 1169888 TEAD4 JASPAR yes 70779099
chr19 1169878 1169888 TEAD1 JASPAR yes 111997596
chr19 1169878 1169888 TEAD4 JASPAR yes 111997597
chr19 1169879 1169887 TEAD3 JASPAR yes 70779100
chr19 1169879 1169887 TEAD3 JASPAR yes 111997598
chr19 1169895 1169901 HiNF-A TRANSFAC yes 70779101
chr19 1169895 1169901 HiNF-A TRANSFAC yes 111997599
chr19 1169908 1169914 MZF1 JASPAR yes 70779102
chr19 1169908 1169914 MZF1 JASPAR yes 111997600
chr19 1169913 1169923 MYF6 JASPAR yes 70779103
chr19 1169913 1169923 MYF6 JASPAR yes 111997601
chr19 1169927 1169933 SP1 TRANSFAC yes 70779104
chr19 1169927 1169933 SP1 TRANSFAC yes 111997602
chr19 1169927 1169937 SP1 JASPAR yes 70779105
chr19 1169927 1169937 SP1 JASPAR yes 111997603
chr19 1169938 1169950 INSM1 JASPAR yes 70779106
chr19 1169938 1169950 INSM1 JASPAR yes 111997604
chr19 1169946 1169961 RUNX2 JASPAR yes 70779107
chr19 1169946 1169961 RUNX2 JASPAR yes 111997605
chr19 1169954 1169959 SP1 TRANSFAC yes 70779108
chr19 1169954 1169959 SP1 TRANSFAC yes 111997606
chr19 1169970 1169981 FOXH1 JASPAR yes 70779109
chr19 1169970 1169981 FOXH1 JASPAR yes 111997607
chr19 1169987 1170001 CREB3 JASPAR yes 70779110
chr19 1169987 1170001 CREB3L1 JASPAR yes 70779111
chr19 1169987 1170001 CREB3 JASPAR yes 111997608
chr19 1169987 1170001 CREB3L1 JASPAR yes 111997609
chr19 1169988 1169998 MAX JASPAR yes 70779112
chr19 1169988 1169998 MAX JASPAR yes 111997610
chr19 1169988 1169999 USF1 JASPAR yes 70779113
chr19 1169988 1169999 USF1 JASPAR yes 111997611
chr19 1169989 1169999 BHLHE40 JASPAR yes 70779114
chr19 1169989 1169999 BHLHE41 JASPAR yes 70779115
chr19 1169989 1169999 HEY1 JASPAR yes 70779116
chr19 1169989 1169999 HEY2 JASPAR yes 70779117
chr19 1169989 1169999 MLXIPL JASPAR yes 70779118
chr19 1169989 1169999 MLX JASPAR yes 70779119
chr19 1169989 1169999 MNT JASPAR yes 70779120
chr19 1169989 1169999 SREBF2 JASPAR yes 70779121
chr19 1169989 1169999 TFE3 JASPAR yes 70779122
chr19 1169989 1169999 TFEB JASPAR yes 70779123
chr19 1169989 1169999 TFEC JASPAR yes 70779124
chr19 1169989 1169999 BHLHE40 JASPAR yes 111997612
chr19 1169989 1169999 BHLHE41 JASPAR yes 111997613
chr19 1169989 1169999 HEY1 JASPAR yes 111997614
chr19 1169989 1169999 HEY2 JASPAR yes 111997615
chr19 1169989 1169999 MLXIPL JASPAR yes 111997616
chr19 1169989 1169999 MLX JASPAR yes 111997617
chr19 1169989 1169999 MNT JASPAR yes 111997618
chr19 1169989 1169999 SREBF2 JASPAR yes 111997619
chr19 1169989 1169999 TFE3 JASPAR yes 111997620
chr19 1169989 1169999 TFEB JASPAR yes 111997621
chr19 1169989 1169999 TFEC JASPAR yes 111997622
chr19 1169989 1170000 USF1 JASPAR yes 70779125
chr19 1169989 1170000 USF2 JASPAR yes 70779126
chr19 1169989 1170000 USF1 JASPAR yes 111997623
chr19 1169989 1170000 USF2 JASPAR yes 111997624
chr19 1169989 1170007 TP63 JASPAR yes 70779127
chr19 1169989 1170007 TP73 JASPAR yes 70779128
chr19 1169989 1170007 TP63 JASPAR yes 111997625
chr19 1169989 1170007 TP73 JASPAR yes 111997626
chr19 1169990 1170000 MAX JASPAR yes 70779129
chr19 1169990 1170000 MAX JASPAR yes 111997627
chr19 1169991 1169996 MYC TRANSFAC yes 70779130
chr19 1169991 1169996 USF1 TRANSFAC yes 70779131
chr19 1169991 1169996 USF2 TRANSFAC yes 70779132
chr19 1169991 1169996 MYC TRANSFAC yes 111997628
chr19 1169991 1169996 USF1 TRANSFAC yes 111997629
chr19 1169991 1169996 USF2 TRANSFAC yes 111997630
chr19 1169994 1170006 GLI2 JASPAR yes 70779133
chr19 1169994 1170006 GLI2 JASPAR yes 111997631
chr19 1170033 1170047 MTF1 JASPAR yes 70779134
chr19 1170033 1170047 MTF1 JASPAR yes 111997632
chr19 1170040 1170045 ATF1 TRANSFAC yes 70779135
chr19 1170040 1170045 ATF1 TRANSFAC yes 111997633
chr19 1170055 1170065 MAX JASPAR yes 70779136
chr19 1170055 1170065 MAX JASPAR yes 111997634
chr19 1170055 1170066 USF1 JASPAR yes 70779137
chr19 1170055 1170066 USF2 JASPAR yes 70779138
chr19 1170055 1170066 USF1 JASPAR yes 111997635
chr19 1170055 1170066 USF2 JASPAR yes 111997636
chr19 1170055 1170067 HES7 JASPAR yes 70779139
chr19 1170055 1170067 HES7 JASPAR yes 111997637
chr19 1170056 1170066 BHLHE40 JASPAR yes 70779140
chr19 1170056 1170066 BHLHE41 JASPAR yes 70779141
chr19 1170056 1170066 HEY1 JASPAR yes 70779142
chr19 1170056 1170066 HEY2 JASPAR yes 70779143
chr19 1170056 1170066 MLXIPL JASPAR yes 70779144
chr19 1170056 1170066 MLX JASPAR yes 70779145
chr19 1170056 1170066 MNT JASPAR yes 70779146
chr19 1170056 1170066 TFE3 JASPAR yes 70779147
chr19 1170056 1170066 TFEB JASPAR yes 70779148
chr19 1170056 1170066 TFEC JASPAR yes 70779149
chr19 1170056 1170066 BHLHE40 JASPAR yes 111997638
chr19 1170056 1170066 BHLHE41 JASPAR yes 111997639
chr19 1170056 1170066 HEY1 JASPAR yes 111997640
chr19 1170056 1170066 HEY2 JASPAR yes 111997641
chr19 1170056 1170066 MLXIPL JASPAR yes 111997642
chr19 1170056 1170066 MLX JASPAR yes 111997643
chr19 1170056 1170066 MNT JASPAR yes 111997644
chr19 1170056 1170066 TFE3 JASPAR yes 111997645
chr19 1170056 1170066 TFEB JASPAR yes 111997646
chr19 1170056 1170066 TFEC JASPAR yes 111997647
chr19 1170058 1170063 MYC TRANSFAC yes 70779150
chr19 1170058 1170063 USF1 TRANSFAC yes 70779151
chr19 1170058 1170063 USF2 TRANSFAC yes 70779152
chr19 1170058 1170063 MYC TRANSFAC yes 111997648
chr19 1170058 1170063 USF1 TRANSFAC yes 111997649
chr19 1170058 1170063 USF2 TRANSFAC yes 111997650
chr19 1170118 1170132 MTF1 JASPAR yes 70779153
chr19 1170118 1170132 MTF1 JASPAR yes 111997651
chr19 1170137 1170150 DUXA JASPAR yes 70779154
chr19 1170137 1170150 DUXA JASPAR yes 111997652
chr19 1170147 1170155 SP1 TRANSFAC yes 70779155
chr19 1170147 1170155 SP1 TRANSFAC yes 111997653
chr19 1170147 1170157 SP1 JASPAR yes 70779156
chr19 1170147 1170157 SP1 JASPAR yes 111997654
chr19 1170161 1170166 SP1 TRANSFAC yes 70779157
chr19 1170161 1170166 SP1 TRANSFAC yes 111997655
chr19 1170164 1170175 EBF1 JASPAR yes 70779158
chr19 1170164 1170175 EBF1 JASPAR yes 111997656
chr19 1170169 1170188 REST JASPAR yes 70779159
chr19 1170169 1170188 REST JASPAR yes 111997657
chr19 1170170 1170184 PLAG1 JASPAR yes 70779160
chr19 1170170 1170184 PLAG1 JASPAR yes 111997658
chr19 1170173 1170182 TFAP2A JASPAR yes 70779161
chr19 1170173 1170182 TFAP2A JASPAR yes 111997659
chr19 1170192 1170197 SP1 TRANSFAC yes 70779162
chr19 1170192 1170197 SP1 TRANSFAC yes 111997660
chr19 1170242 1170257 TFAP2C JASPAR yes 70779163
chr19 1170242 1170257 TFAP2C JASPAR yes 111997661
chr19 1170244 1170257 TFAP2A JASPAR yes 70779164
chr19 1170244 1170257 TFAP2B JASPAR yes 70779165
chr19 1170244 1170257 TFAP2C JASPAR yes 70779166
chr19 1170244 1170257 TFAP2A JASPAR yes 111997662
chr19 1170244 1170257 TFAP2B JASPAR yes 111997663
chr19 1170244 1170257 TFAP2C JASPAR yes 111997664
chr19 1170258 1170279 REST JASPAR yes 70779167
chr19 1170258 1170279 REST JASPAR yes 111997665
chr19 1170259 1170278 REST JASPAR yes 70779168
chr19 1170259 1170278 REST JASPAR yes 111997666
chr19 1170294 1170302 TBX5 JASPAR yes 70779169
chr19 1170294 1170302 TBX5 JASPAR yes 111997667
chr19 1170301 1170316 ZIC3 JASPAR yes 70779170
chr19 1170301 1170316 ZIC4 JASPAR yes 70779171
chr19 1170301 1170316 ZIC3 JASPAR yes 111997668
chr19 1170301 1170316 ZIC4 JASPAR yes 111997669
chr19 1170302 1170316 ZIC1 JASPAR yes 70779172
chr19 1170302 1170316 ZIC1 JASPAR yes 111997670
chr19 1170311 1170326 ESR2 JASPAR yes 70779173
chr19 1170311 1170326 ESR2 JASPAR yes 111997671
chr19 1170311 1170331 ESR1 JASPAR yes 70779174
chr19 1170311 1170331 ESR1 JASPAR yes 111997672
SNP sites on vista28142[chr19:1169743-1170349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1169876 rs551799581 C T
HSF2 POLR2A USF1 USF2
5372702
chr19 1169881 rs11882501 C T
HSF2 POLR2A TEAD1 TEAD3 TEAD4 USF1 USF2
5372703
chr19 1169905 rs548536065 C T
MAX POLR2A USF1 USF2
5372704
chr19 1170009 rs112839997 A AC
BHLHE40 GATA2 MAX POLR2A USF1 USF2
5372705
chr19 1170079 rs538785490 G A
BHLHE40 GATA2 MAX POLR2A USF1 USF2
5372706
chr19 1170102 rs182870996 G A
BHLHE40 GATA2 MAX POLR2A USF1 USF2
5372707
chr19 1170297 rs4807629 A G
POLR2A TBX5
5372708
Genes possibly regulated by vista28142[chr19:1169743-1170349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 25855
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 34193
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 96067
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 80943
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 32323
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 28600
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 21797
chr19 1259384 1274879 + CIRBP ENSG00000099622.9 1259384 0.71 1.0 16740 10965
Expression level of Genes
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miRNAs possibly regulated by vista28142[chr19:1169743-1170349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results