EnhancerDB
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  3. vista28146[chr19:1175432-1175562]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28146[chr19:1175432-1175562]
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Tissue distribution of vista28146
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Transcription factor that possibly regulate vista28146[chr19:1175432-1175562]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1175438 1175447 VENTX JASPAR yes 70779306
chr19 1175438 1175447 VENTX JASPAR yes 111998404
chr19 1175439 1175449 CUX1 JASPAR yes 70779307
chr19 1175439 1175449 CUX2 JASPAR yes 70779308
chr19 1175439 1175449 CUX1 JASPAR yes 111998405
chr19 1175439 1175449 CUX2 JASPAR yes 111998406
chr19 1175449 1175470 REST JASPAR yes 70779309
chr19 1175449 1175470 REST JASPAR yes 111998407
chr19 1175450 1175469 REST JASPAR yes 70779310
chr19 1175450 1175469 REST JASPAR yes 111998408
chr19 1175456 1175467 NFE2L2 JASPAR yes 70779311
chr19 1175456 1175467 NFE2L2 JASPAR yes 111998409
chr19 1175461 1175465 ESR1 TRANSFAC yes 70779312
chr19 1175461 1175465 ESR1 TRANSFAC yes 111998410
chr19 1175472 1175483 NFKB1 JASPAR yes 70779313
chr19 1175472 1175483 NFKB1 JASPAR yes 111998411
chr19 1175473 1175483 RELA JASPAR yes 70779314
chr19 1175473 1175483 REL JASPAR yes 70779315
chr19 1175473 1175483 RELA JASPAR yes 111998412
chr19 1175473 1175483 REL JASPAR yes 111998413
chr19 1175498 1175508 TFAP4 JASPAR yes 70779316
chr19 1175498 1175508 TFAP4 JASPAR yes 111998414
chr19 1175503 1175507 NFE TRANSFAC yes 70779317
chr19 1175503 1175507 NFE TRANSFAC yes 111998415
chr19 1175507 1175511 NFE TRANSFAC yes 70779318
chr19 1175507 1175511 NFE TRANSFAC yes 111998416
chr19 1175520 1175530 NFKB1 JASPAR yes 70779319
chr19 1175520 1175530 NFKB1 JASPAR yes 111998417
chr19 1175533 1175553 PPARG JASPAR yes 70779320
chr19 1175533 1175553 PPARG JASPAR yes 111998418
chr19 1175534 1175554 PPARG JASPAR yes 70779321
chr19 1175534 1175554 PPARG JASPAR yes 111998419
chr19 1175543 1175562 REST JASPAR yes 70779322
chr19 1175543 1175562 REST JASPAR yes 111998420
SNP sites on vista28146[chr19:1175432-1175562]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1175454 rs559634508 C G
REST
5372798
chr19 1175555 rs562984724 A G
REST
5372799
Genes possibly regulated by vista28146[chr19:1175432-1175562]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 20166
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 28504
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 98850
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 86156
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 37536
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 33813
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 27010
chr19 1259384 1274879 + CIRBP ENSG00000099622.9 1259384 0.71 1.0 16740 16178
chr19 1275026 1279248 + C19orf24 ENSG00000228300.9 1275026 0.65 1.0 16741 536
Expression level of Genes
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miRNAs possibly regulated by vista28146[chr19:1175432-1175562]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results