EnhancerDB
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  3. vista28149[chr19:1207906-1208235]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28149[chr19:1207906-1208235]
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Tissue distribution of vista28149
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Transcription factor that possibly regulate vista28149[chr19:1207906-1208235]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1207244 1208344 POLR2A UCSC Txn Factor no Conserved 108351236
chr19 1207524 1208316 GATA2 UCSC Txn Factor no Conserved 108351291
chr19 1207633 1208362 GATA1 UCSC Txn Factor no Conserved 108351299
chr19 1207842 1208194 CCNT2 UCSC Txn Factor no Conserved 108351337
chr19 1207853 1208192 HMGN3 UCSC Txn Factor no Conserved 108351346
chr19 1207872 1208099 EGR1 UCSC Txn Factor no Conserved 108351355
chr19 1207874 1208210 TAL1 UCSC Txn Factor no Conserved 108351359
chr19 1207877 1208209 TEAD4 UCSC Txn Factor no Conserved 108351361
chr19 1207898 1208167 PML UCSC Txn Factor no Conserved 108351373
chr19 1207922 1208085 BHLHE40 UCSC Txn Factor no Conserved 108351382
chr19 1207948 1208102 EP300 UCSC Txn Factor no Conserved 108351392
chr19 1207948 1208225 STAT5A UCSC Txn Factor no Conserved 108351393
chr19 1207937 1207941 LFA1 TRANSFAC yes 70779462
chr19 1207937 1207941 LFA1 TRANSFAC yes 112002329
chr19 1207963 1207975 NHLH1 JASPAR yes 70779463
chr19 1207963 1207975 NHLH1 JASPAR yes 112002330
chr19 1207964 1207974 TFAP4 JASPAR yes 70779464
chr19 1207964 1207974 TFAP4 JASPAR yes 112002331
chr19 1207964 1207976 TAL1 JASPAR yes 70779465
chr19 1207964 1207976 TAL1 JASPAR yes 112002332
chr19 1207969 1207989 RREB1 JASPAR yes 70779466
chr19 1207969 1207989 RREB1 JASPAR yes 112002333
chr19 1207971 1207976 SP1 TRANSFAC yes 70779467
chr19 1207971 1207976 SP1 TRANSFAC yes 112002334
chr19 1207972 1207982 ZNF740 JASPAR yes 70779468
chr19 1207972 1207982 ZNF740 JASPAR yes 112002335
chr19 1207983 1207996 NFKB1 JASPAR yes 70779469
chr19 1207983 1207996 NFKB2 JASPAR yes 70779470
chr19 1207983 1207996 NFKB1 JASPAR yes 112002336
chr19 1207983 1207996 NFKB2 JASPAR yes 112002337
chr19 1207984 1207995 NFKB1 JASPAR yes 70779471
chr19 1207984 1207995 NFKB1 JASPAR yes 112002338
chr19 1208018 1208028 ID4 JASPAR yes 70779472
chr19 1208018 1208028 TCF3 JASPAR yes 70779473
chr19 1208018 1208028 TCF4 JASPAR yes 70779474
chr19 1208018 1208028 ID4 JASPAR yes 112002339
chr19 1208018 1208028 TCF3 JASPAR yes 112002340
chr19 1208018 1208028 TCF4 JASPAR yes 112002341
chr19 1208019 1208028 SNAI2 JASPAR yes 70779475
chr19 1208019 1208028 SNAI2 JASPAR yes 112002342
chr19 1208020 1208025 USF2 TRANSFAC yes 70779476
chr19 1208020 1208025 USF2 TRANSFAC yes 112002343
chr19 1208024 1208043 CTCF JASPAR yes 70779477
chr19 1208024 1208043 CTCF JASPAR yes 112002344
chr19 1208035 1208040 SP1 TRANSFAC yes 70779478
chr19 1208035 1208040 SP1 TRANSFAC yes 112002345
chr19 1208075 1208078 MYB TRANSFAC yes 70779479
chr19 1208075 1208078 MYB TRANSFAC yes 112002346
chr19 1208083 1208098 HNF4G JASPAR yes 70779480
chr19 1208083 1208098 HNF4G JASPAR yes 112002347
chr19 1208090 1208104 SPIC JASPAR yes 70779481
chr19 1208090 1208104 SPIC JASPAR yes 112002348
chr19 1208096 1208113 BCL6B JASPAR yes 70779482
chr19 1208096 1208113 BCL6B JASPAR yes 112002349
chr19 1208097 1208105 FOXO3 JASPAR yes 70779483
chr19 1208097 1208105 FOXO3 JASPAR yes 112002350
chr19 1208097 1208112 STAT1 JASPAR yes 70779484
chr19 1208097 1208112 STAT1 JASPAR yes 112002351
chr19 1208099 1208110 STAT1 JASPAR yes 70779485
chr19 1208099 1208110 STAT3 JASPAR yes 70779486
chr19 1208099 1208110 STAT1 JASPAR yes 112002352
chr19 1208099 1208110 STAT3 JASPAR yes 112002353
chr19 1208109 1208123 GATA2 JASPAR yes 70779487
chr19 1208109 1208123 GATA2 JASPAR yes 112002354
chr19 1208113 1208121 GATA3 JASPAR yes 70779488
chr19 1208113 1208121 GATA5 JASPAR yes 70779489
chr19 1208113 1208121 GATA3 JASPAR yes 112002355
chr19 1208113 1208121 GATA5 JASPAR yes 112002356
chr19 1208143 1208163 ESR1 JASPAR yes 70779490
chr19 1208143 1208163 ESR1 JASPAR yes 112002357
chr19 1208147 1208162 AR JASPAR yes 70779491
chr19 1208147 1208162 AR JASPAR yes 112002358
chr19 1208157 1208177 ESR1 JASPAR yes 70779492
chr19 1208157 1208177 ESR1 JASPAR yes 112002359
chr19 1208160 1208178 ESR1 JASPAR yes 70779493
chr19 1208160 1208178 ESR2 JASPAR yes 70779494
chr19 1208160 1208178 ESR1 JASPAR yes 112002360
chr19 1208160 1208178 ESR2 JASPAR yes 112002361
chr19 1208161 1208178 ESR1 JASPAR yes 70779495
chr19 1208161 1208178 ESR1 JASPAR yes 112002362
chr19 1208161 1208179 ESR2 JASPAR yes 70779496
chr19 1208161 1208179 ESR2 JASPAR yes 112002363
chr19 1208162 1208177 ESR2 JASPAR yes 70779497
chr19 1208162 1208177 ESR2 JASPAR yes 112002364
chr19 1208162 1208182 ESR1 JASPAR yes 70779498
chr19 1208162 1208182 ESR1 JASPAR yes 112002365
chr19 1208163 1208167 LFA1 TRANSFAC yes 70779499
chr19 1208163 1208167 LFA1 TRANSFAC yes 112002366
chr19 1208167 1208180 NR2F1 JASPAR yes 70779500
chr19 1208167 1208180 NR2F1 JASPAR yes 112002367
chr19 1208169 1208180 ESRRA JASPAR yes 70779501
chr19 1208169 1208180 ESRRB JASPAR yes 70779502
chr19 1208169 1208180 ESRRA JASPAR yes 112002368
chr19 1208169 1208180 ESRRB JASPAR yes 112002369
chr19 1208171 1208181 RORA JASPAR yes 70779503
chr19 1208171 1208181 RORA JASPAR yes 112002370
chr19 1208175 1208189 GLIS3 JASPAR yes 70779504
chr19 1208175 1208189 GLIS3 JASPAR yes 112002371
chr19 1208179 1208200 ZNF263 JASPAR yes 70779505
chr19 1208179 1208200 ZNF263 JASPAR yes 112002372
chr19 1208185 1208189 H4TF2 TRANSFAC yes 70779506
chr19 1208185 1208189 H4TF2 TRANSFAC yes 112002373
chr19 1208189 1208199 SP1 JASPAR yes 70779507
chr19 1208189 1208199 SP1 JASPAR yes 112002374
chr19 1208191 1208197 MAZ TRANSFAC yes 70779508
chr19 1208191 1208197 MAZ TRANSFAC yes 112002375
chr19 1208208 1208226 IRF2 JASPAR yes 70779509
chr19 1208208 1208226 IRF2 JASPAR yes 112002376
chr19 1208211 1208226 PRDM1 JASPAR yes 70779510
chr19 1208211 1208226 PRDM1 JASPAR yes 112002377
chr19 1208214 1208235 ZNF263 JASPAR yes 70779511
chr19 1208214 1208235 ZNF263 JASPAR yes 112002378
chr19 1208220 1208228 EHF JASPAR yes 70779512
chr19 1208220 1208228 EHF JASPAR yes 112002379
chr19 1208235 1208240 SP1 TRANSFAC yes 70779513
chr19 1208235 1208240 SP1 TRANSFAC yes 112002380
SNP sites on vista28149[chr19:1207906-1208235]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1207908 rs552886516 T C
CCNT2 EGR1 GATA1 GATA2 HMGN3 PML POLR2A TAL1 TEAD4
5373277
chr19 1207968 rs147463204 A C
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NHLH1 PML POLR2A STAT5A TAL1 TEAD4 TFAP4
5373278
chr19 1207989 rs571455034 G A
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 NFKB1 NFKB2 PML POLR2A RREB1 STAT5A TAL1 TEAD4
5373279
chr19 1208005 rs529345347 G A,T
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373280
chr19 1208016 rs374599606 C G
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373281
chr19 1208055 rs34973804 C G
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373282
chr19 1208066 rs570340590 C T
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373283
chr19 1208072 rs7256801 T C
BHLHE40 CCNT2 EGR1 EP300 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373284
chr19 1208146 rs534657069 G T
CCNT2 ESR1 GATA1 GATA2 HMGN3 PML POLR2A STAT5A TAL1 TEAD4
5373285
chr19 1208196 rs571328110 G A
GATA1 GATA2 MAZ POLR2A SP1 STAT5A TAL1 TEAD4 ZNF263
5373286
Genes possibly regulated by vista28149[chr19:1207906-1208235]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 66376
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 81500
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 70209
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 66486
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 59683
chr19 1259384 1274879 + CIRBP ENSG00000099622.9 1259384 0.71 1.0 16740 48851
chr19 1275026 1279248 + C19orf24 ENSG00000228300.9 1275026 0.65 1.0 16741 33209
chr19 1285890 1378430 + MUM1 ENSG00000160953.10 1285890 0.71 1.0 16742 22345
chr19 1286153 1301430 + EFNA2 ENSG00000099617.2 1286153 0.97 1.0 16743 22082
Expression level of Genes
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miRNAs possibly regulated by vista28149[chr19:1207906-1208235]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results