EnhancerDB
  1. Home
  2. Enhancers
  3. vista28152[chr19:1240232-1240534]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28152[chr19:1240232-1240534]
Back to top
Tissue distribution of vista28152
Back to top
Transcription factor that possibly regulate vista28152[chr19:1240232-1240534]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1239860 1240332 PHF8 UCSC Txn Factor no Conserved 108351576
chr19 1240114 1240633 ZBTB7A UCSC Txn Factor no Conserved 108351645
chr19 1240140 1240424 JUND UCSC Txn Factor no Conserved 108351659
chr19 1240165 1240529 EGR1 UCSC Txn Factor no Conserved 108351676
chr19 1240176 1240640 MAZ UCSC Txn Factor no Conserved 108351684
chr19 1240214 1240494 CREB1 UCSC Txn Factor no Conserved 108351712
chr19 1240221 1240523 NRF1 UCSC Txn Factor no Conserved 108351729
chr19 1240276 1240652 CTCF UCSC Txn Factor no Conserved 108351779
chr19 1240321 1240585 RAD21 UCSC Txn Factor no Conserved 108351805
chr19 1240247 1240252 SP1 TRANSFAC yes 70779688
chr19 1240248 1240267 REST JASPAR yes 70779689
chr19 1240253 1240273 ESR1 JASPAR yes 70779690
chr19 1240281 1240289 SP1 TRANSFAC yes 70779691
chr19 1240281 1240289 WT1 TRANSFAC yes 70779692
chr19 1240283 1240290 SP1 TRANSFAC yes 70779693
chr19 1240283 1240293 SP1 JASPAR yes 70779694
chr19 1240284 1240292 SP1 TRANSFAC yes 70779695
chr19 1240284 1240293 SP1 TRANSFAC yes 70779696
chr19 1240285 1240290 SP1 TRANSFAC yes 70779697
chr19 1240286 1240291 SP1 TRANSFAC yes 70779698
chr19 1240286 1240292 SP1 TRANSFAC yes 70779699
chr19 1240289 1240299 SP1 JASPAR yes 70779700
chr19 1240290 1240295 SP1 TRANSFAC yes 70779701
chr19 1240291 1240303 CREB1 JASPAR yes 70779702
chr19 1240291 1240306 JUND JASPAR yes 70779703
chr19 1240292 1240305 JUN JASPAR yes 70779704
chr19 1240293 1240307 ATF7 JASPAR yes 70779705
chr19 1240293 1240307 BATF3 JASPAR yes 70779706
chr19 1240293 1240307 CREB3 JASPAR yes 70779707
chr19 1240294 1240306 HLF JASPAR yes 70779708
chr19 1240294 1240306 JDP2 JASPAR yes 70779709
chr19 1240294 1240309 JUND JASPAR yes 70779710
chr19 1240295 1240308 JUN JASPAR yes 70779711
chr19 1240296 1240301 ATF1 TRANSFAC yes 70779712
chr19 1240296 1240304 CREB1 JASPAR yes 70779713
chr19 1240298 1240303 ATF1 TRANSFAC yes 70779714
chr19 1240315 1240326 NRF1 JASPAR yes 70779715
chr19 1240333 1240347 BATF3 JASPAR yes 70779716
chr19 1240357 1240362 SP1 TRANSFAC yes 70779717
chr19 1240357 1240368 NRF1 JASPAR yes 70779718
chr19 1240362 1240373 NRF1 JASPAR yes 70779719
chr19 1240376 1240382 ATF1 TRANSFAC yes 70779720
chr19 1240383 1240397 PLAG1 JASPAR yes 70779721
chr19 1240409 1240425 GLIS1 JASPAR yes 70779722
chr19 1240410 1240420 SP1 JASPAR yes 70779723
chr19 1240410 1240424 GLIS2 JASPAR yes 70779724
chr19 1240410 1240424 GLIS3 JASPAR yes 70779725
chr19 1240410 1240425 NR2C2 JASPAR yes 70779726
chr19 1240413 1240418 SP1 TRANSFAC yes 70779727
chr19 1240414 1240424 ZNF740 JASPAR yes 70779728
chr19 1240414 1240426 ZBTB7B JASPAR yes 70779729
chr19 1240414 1240426 ZBTB7C JASPAR yes 70779730
chr19 1240415 1240427 ZBTB7A JASPAR yes 70779731
chr19 1240446 1240465 CTCF JASPAR yes 70779732
chr19 1240471 1240492 REST JASPAR yes 70779733
chr19 1240483 1240487 H4TF2 TRANSFAC yes 70779734
chr19 1240492 1240498 MZF1 JASPAR yes 70779735
chr19 1240502 1240516 GLIS2 JASPAR yes 70779736
chr19 1240502 1240516 GLIS3 JASPAR yes 70779737
chr19 1240502 1240517 ZIC3 JASPAR yes 70779738
chr19 1240503 1240514 E2F4 JASPAR yes 70779739
chr19 1240503 1240514 E2F6 JASPAR yes 70779740
chr19 1240504 1240515 E2F1 JASPAR yes 70779741
SNP sites on vista28152[chr19:1240232-1240534]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1240332 rs149486497 C G,T
CREB1 CTCF EGR1 JUND MAZ NRF1 PHF8 RAD21 ZBTB7A
5373627
chr19 1240369 rs529920118 C T
CREB1 CTCF EGR1 JUND MAZ NRF1 RAD21 ZBTB7A
5373628
chr19 1240388 rs548430285 C T
CREB1 CTCF EGR1 JUND MAZ NRF1 PLAG1 RAD21 ZBTB7A
5373629
chr19 1240490 rs191206036 G A
CREB1 CTCF EGR1 MAZ NRF1 RAD21 REST ZBTB7A
5373630
Genes possibly regulated by vista28152[chr19:1240232-1240534]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 34050
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 49174
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 97794
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 98785
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 91982
chr19 1259384 1274879 + CIRBP ENSG00000099622.9 1259384 0.71 1.0 16740 81150
chr19 1275026 1279248 + C19orf24 ENSG00000228300.9 1275026 0.65 1.0 16741 65508
chr19 1285890 1378430 + MUM1 ENSG00000160953.10 1285890 0.71 1.0 16742 54644
chr19 1286153 1301430 + EFNA2 ENSG00000099617.2 1286153 0.97 1.0 16743 54381
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28152[chr19:1240232-1240534]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results