EnhancerDB
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  3. vista28153[chr19:1252961-1253429]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28153[chr19:1252961-1253429]
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Tissue distribution of vista28153
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Transcription factor that possibly regulate vista28153[chr19:1252961-1253429]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1247965 1256333 POLR2A UCSC Txn Factor no Conserved 108351848
chr19 1252970 1253286 EBF1 UCSC Txn Factor no Conserved 108352052
chr19 1253211 1253831 JUND UCSC Txn Factor no Conserved 108352119
chr19 1252961 1252975 TLX1 JASPAR yes 70779742
chr19 1252967 1252972 SP1 TRANSFAC yes 70779743
chr19 1252970 1252979 TFAP2A JASPAR yes 70779744
chr19 1252984 1252997 EOMES JASPAR yes 70779745
chr19 1252986 1252996 TBR1 JASPAR yes 70779746
chr19 1252986 1252997 TBX20 JASPAR yes 70779747
chr19 1252986 1252997 TBX2 JASPAR yes 70779748
chr19 1252987 1252997 TBX21 JASPAR yes 70779749
chr19 1252988 1252996 MGA JASPAR yes 70779750
chr19 1252988 1252996 TBX15 JASPAR yes 70779751
chr19 1252988 1252996 TBX1 JASPAR yes 70779752
chr19 1252988 1252996 TBX4 JASPAR yes 70779753
chr19 1252988 1252996 TBX5 JASPAR yes 70779754
chr19 1253005 1253016 NRF1 JASPAR yes 70779755
chr19 1253011 1253017 ATF1 TRANSFAC yes 70779756
chr19 1253016 1253024 EHF JASPAR yes 70779757
chr19 1253017 1253037 RREB1 JASPAR yes 70779758
chr19 1253019 1253040 ZNF263 JASPAR yes 70779759
chr19 1253030 1253040 ZNF740 JASPAR yes 70779760
chr19 1253031 1253041 ZNF740 JASPAR yes 70779761
chr19 1253032 1253042 ZNF740 JASPAR yes 70779762
chr19 1253032 1253052 RREB1 JASPAR yes 70779763
chr19 1253036 1253050 PLAG1 JASPAR yes 70779764
chr19 1253037 1253051 PLAG1 JASPAR yes 70779765
chr19 1253041 1253061 RREB1 JASPAR yes 70779766
chr19 1253055 1253060 SP1 TRANSFAC yes 70779767
chr19 1253071 1253082 EBF1 JASPAR yes 70779768
chr19 1253072 1253078 MZF1 JASPAR yes 70779769
chr19 1253089 1253102 SMAD2 JASPAR yes 70779770
chr19 1253093 1253107 TLX1 JASPAR yes 70779771
chr19 1253094 1253108 TLX1 JASPAR yes 70779772
chr19 1253106 1253115 HIC2 JASPAR yes 70779773
chr19 1253108 1253115 SP1 TRANSFAC yes 70779774
chr19 1253110 1253115 SP1 TRANSFAC yes 70779775
chr19 1253115 1253119 YY1 TRANSFAC yes 70779776
chr19 1253122 1253136 EBF1 JASPAR yes 70779777
chr19 1253123 1253134 EBF1 JASPAR yes 70779778
chr19 1253124 1253130 MZF1 JASPAR yes 70779779
chr19 1253128 1253141 ELF1 JASPAR yes 70779780
chr19 1253131 1253137 PEA3 TRANSFAC yes 70779781
chr19 1253131 1253141 ETV6 JASPAR yes 70779782
chr19 1253131 1253142 FLI1 JASPAR yes 70779783
chr19 1253132 1253140 EHF JASPAR yes 70779784
chr19 1253133 1253140 SPI1 JASPAR yes 70779785
chr19 1253141 1253161 RREB1 JASPAR yes 70779786
chr19 1253143 1253149 SP1 TRANSFAC yes 70779787
chr19 1253144 1253149 SP1 TRANSFAC yes 70779788
chr19 1253144 1253164 RREB1 JASPAR yes 70779789
chr19 1253145 1253150 SP1 TRANSFAC yes 70779790
chr19 1253155 1253160 SP1 TRANSFAC yes 70779791
chr19 1253157 1253162 TFAP2A TRANSFAC yes 70779792
chr19 1253157 1253163 MZF1 JASPAR yes 70779793
chr19 1253164 1253174 MSC JASPAR yes 70779794
chr19 1253177 1253182 ETS2 TRANSFAC yes 70779795
chr19 1253192 1253203 FLI1 JASPAR yes 70779796
chr19 1253194 1253202 EHF JASPAR yes 70779797
chr19 1253200 1253206 TCF4 TRANSFAC yes 70779798
chr19 1253208 1253212 NFE TRANSFAC yes 70779799
chr19 1253215 1253225 SP1 JASPAR yes 70779800
chr19 1253215 1253236 ZNF263 JASPAR yes 70779801
chr19 1253216 1253220 LFA1 TRANSFAC yes 70779802
chr19 1253230 1253235 SP1 TRANSFAC yes 70779803
chr19 1253230 1253237 SP1 TRANSFAC yes 70779804
chr19 1253230 1253239 SP1 TRANSFAC yes 70779805
chr19 1253236 1253240 LFA1 TRANSFAC yes 70779806
chr19 1253254 1253259 SP1 TRANSFAC yes 70779807
chr19 1253257 1253270 NFKB1 JASPAR yes 70779808
chr19 1253257 1253270 NFKB2 JASPAR yes 70779809
chr19 1253258 1253268 NFKB1 JASPAR yes 70779810
chr19 1253260 1253281 ZNF263 JASPAR yes 70779811
chr19 1253263 1253284 ZNF263 JASPAR yes 70779812
chr19 1253266 1253276 SP1 JASPAR yes 70779813
chr19 1253271 1253292 ZNF263 JASPAR yes 70779814
chr19 1253272 1253293 ZNF263 JASPAR yes 70779815
chr19 1253275 1253296 ZNF263 JASPAR yes 70779816
chr19 1253279 1253289 SP1 JASPAR yes 70779817
chr19 1253283 1253294 E2F6 JASPAR yes 70779818
chr19 1253290 1253296 MZF1 JASPAR yes 70779819
chr19 1253290 1253304 PLAG1 JASPAR yes 70779820
chr19 1253296 1253315 REST JASPAR yes 70779821
chr19 1253298 1253312 GLIS2 JASPAR yes 70779822
chr19 1253314 1253326 HLF JASPAR yes 70779823
chr19 1253335 1253356 ZNF263 JASPAR yes 70779824
chr19 1253338 1253359 ZNF263 JASPAR yes 70779825
chr19 1253349 1253355 MAZ TRANSFAC yes 70779826
chr19 1253349 1253360 E2F6 JASPAR yes 70779827
chr19 1253365 1253370 SP1 TRANSFAC yes 70779828
chr19 1253372 1253386 JUN JASPAR yes 70779829
chr19 1253374 1253385 BATF JASPAR yes 70779830
chr19 1253376 1253387 FOS JASPAR yes 70779831
chr19 1253376 1253387 FOSL1 JASPAR yes 70779832
chr19 1253376 1253387 JUND JASPAR yes 70779833
chr19 1253377 1253386 JDP2 JASPAR yes 70779834
chr19 1253377 1253388 FOSL2 JASPAR yes 70779835
chr19 1253377 1253388 JUNB JASPAR yes 70779836
chr19 1253377 1253391 JUN JASPAR yes 70779837
chr19 1253378 1253389 BATF JASPAR yes 70779838
chr19 1253398 1253413 STAT1 JASPAR yes 70779839
chr19 1253400 1253411 STAT1 JASPAR yes 70779840
chr19 1253400 1253411 STAT3 JASPAR yes 70779841
chr19 1253417 1253427 ZNF740 JASPAR yes 70779842
chr19 1253418 1253428 ZNF740 JASPAR yes 70779843
chr19 1253419 1253429 SP1 JASPAR yes 70779844
chr19 1253419 1253429 ZNF740 JASPAR yes 70779845
SNP sites on vista28153[chr19:1252961-1253429]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1253040 rs78572158 G T
EBF1 PLAG1 POLR2A RREB1 ZNF263 ZNF740
5373826
chr19 1253043 rs111898804 T TG,TGG
EBF1 PLAG1 POLR2A RREB1
5373827
chr19 1253046 rs11084891 A G
EBF1 PLAG1 POLR2A RREB1
5373828
chr19 1253066 rs370621691 A G
EBF1 POLR2A
5373829
chr19 1253102 rs563065460 G A
EBF1 POLR2A SMAD2 TLX1
5373830
chr19 1253178 rs376796470 G A,C
EBF1 ETS2 POLR2A
5373831
chr19 1253179 rs180902362 G A
EBF1 ETS2 POLR2A
5373832
chr19 1253349 rs113173533 C T
E2F6 JUND MAZ POLR2A ZNF263
5373833
chr19 1253389 rs78900759 C A,T
BATF JUN JUND POLR2A
5373834
chr19 1253420 rs59156314 AC A
JUND POLR2A SP1 ZNF740
5373835
chr19 1253420 rs71335353 AC A
JUND POLR2A SP1 ZNF740
5373836
Genes possibly regulated by vista28153[chr19:1252961-1253429]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 21321
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 36445
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 85065
chr19 1241749 1244824 + ATP5D ENSG00000099624.3 1241749 0.67 1.0 16738 88788
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 0.69 1.0 16739 95591
chr19 1259384 1274879 + CIRBP ENSG00000099622.9 1259384 0.71 1.0 16740 94045
chr19 1275026 1279248 + C19orf24 ENSG00000228300.9 1275026 0.65 1.0 16741 78403
chr19 1285890 1378430 + MUM1 ENSG00000160953.10 1285890 0.71 1.0 16742 67539
chr19 1286153 1301430 + EFNA2 ENSG00000099617.2 1286153 0.97 1.0 16743 67276
Expression level of Genes
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miRNAs possibly regulated by vista28153[chr19:1252961-1253429]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results